RNA–Protein interactions for RNA: ENST00000603731.1

HERPUD2-207, Transcript of HERPUD family member 2, humanhuman

TSL 3

Gene HERPUD2, Length 505 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2-207ENST00000603731 LMOD3Q0VAK6 560 aa16.56■□□□□ 0.24
HERPUD2-207ENST00000603731 CHRNA2Q15822 529 aa16.56■□□□□ 0.24
HERPUD2-207ENST00000603731 PRDM11Q9NQV5 511 aa16.56■□□□□ 0.24
HERPUD2-207ENST00000603731 CSB-PGBD3P0DP91 1061 aa16.55■□□□□ 0.24
HERPUD2-207ENST00000603731 AXIN2Q9Y2T1 843 aa16.55■□□□□ 0.24
HERPUD2-207ENST00000603731 NEFLP07196 543 aa16.53■□□□□ 0.24
HERPUD2-207ENST00000603731 R3HDM1Q15032 1099 aaKnown RBP16.53■□□□□ 0.24
HERPUD2-207ENST00000603731 NBPF6Q5VWK0 638 aa16.53■□□□□ 0.24
HERPUD2-207ENST00000603731 USHBP1Q8N6Y0 703 aa16.53■□□□□ 0.24
HERPUD2-207ENST00000603731 NBPF4Q96M43 638 aa16.53■□□□□ 0.24
HERPUD2-207ENST00000603731 TRIM35Q9UPQ4 493 aa16.53■□□□□ 0.24
HERPUD2-207ENST00000603731 CAMTA1Q9Y6Y1 1673 aa16.53■□□□□ 0.24
HERPUD2-207ENST00000603731 ERBB3P21860 1342 aa16.52■□□□□ 0.24
HERPUD2-207ENST00000603731 BAG6P46379 1132 aa16.52■□□□□ 0.24
HERPUD2-207ENST00000603731 CALD1Q05682 793 aaKnown RBP16.52■□□□□ 0.24
HERPUD2-207ENST00000603731 SEPT12Q8IYM1 358 aa16.52■□□□□ 0.24
HERPUD2-207ENST00000603731 GAS2L2Q8NHY3 880 aa16.52■□□□□ 0.24
HERPUD2-207ENST00000603731 SUPT16HQ9Y5B9 1047 aaKnown RBP16.52■□□□□ 0.24
HERPUD2-207ENST00000603731 GTF3C3Q9Y5Q9 886 aa16.52■□□□□ 0.24
HERPUD2-207ENST00000603731 DUSP27Q5VZP5 1158 aa16.51■□□□□ 0.23
HERPUD2-207ENST00000603731 UNC5CLQ8IV45 518 aa16.51■□□□□ 0.23
HERPUD2-207ENST00000603731 MYH16Q9H6N6 1097 aa16.51■□□□□ 0.23
HERPUD2-207ENST00000603731 NLRP2Q9NX02 1062 aa16.51■□□□□ 0.23
HERPUD2-207ENST00000603731 SLIT2O94813 1529 aa16.5■□□□□ 0.23
HERPUD2-207ENST00000603731 IL16Q14005 1332 aa16.5■□□□□ 0.23
HERPUD2-207ENST00000603731 TRMT2AQ8IZ69 625 aaKnown RBP16.5■□□□□ 0.23
HERPUD2-207ENST00000603731 LMO7Q8WWI1 1683 aa16.5■□□□□ 0.23
HERPUD2-207ENST00000603731 MTHFSDQ2M296 383 aaKnown RBP16.49■□□□□ 0.23
HERPUD2-207ENST00000603731 RCAN3Q9UKA8 241 aa16.49■□□□□ 0.23
HERPUD2-207ENST00000603731 COL14A1Q05707 1796 aaKnown RBP16.49■□□□□ 0.23
HERPUD2-207ENST00000603731 NCAPD2Q15021 1401 aa16.48■□□□□ 0.23
HERPUD2-207ENST00000603731 EVA1CP58658 441 aa16.48■□□□□ 0.23
HERPUD2-207ENST00000603731 RTF1Q92541 710 aaKnown RBP16.48■□□□□ 0.23
HERPUD2-207ENST00000603731 SPINK5Q9NQ38 1064 aaPredicted RBP16.48■□□□□ 0.23
HERPUD2-207ENST00000603731 EN1Q05925 392 aaPredicted RBP16.47■□□□□ 0.23
HERPUD2-207ENST00000603731 PLEKHO1Q53GL0 409 aaPredicted RBP16.47■□□□□ 0.23
HERPUD2-207ENST00000603731 KRT27Q7Z3Y8 459 aa16.47■□□□□ 0.23
HERPUD2-207ENST00000603731 AMOTQ4VCS5 1084 aa16.46■□□□□ 0.23
HERPUD2-207ENST00000603731 RAPGEF4Q8WZA2 1011 aa16.46■□□□□ 0.23
HERPUD2-207ENST00000603731 LAS1LQ9Y4W2 734 aaKnown RBP16.46■□□□□ 0.23
HERPUD2-207ENST00000603731 FAM83GA6ND36 823 aa16.45■□□□□ 0.22
HERPUD2-207ENST00000603731 HTATSF1O43719 755 aaKnown RBP16.45■□□□□ 0.22
HERPUD2-207ENST00000603731 TATP17735 454 aaPredicted RBP16.45■□□□□ 0.22
HERPUD2-207ENST00000603731 TOM1L2Q6ZVM7 507 aa16.45■□□□□ 0.22
HERPUD2-207ENST00000603731 COL5A2P05997 1499 aaPredicted RBP16.45■□□□□ 0.22
HERPUD2-207ENST00000603731 WDR17Q8IZU2 1322 aa16.45■□□□□ 0.22
HERPUD2-207ENST00000603731 GNAT3A8MTJ3 354 aa16.44■□□□□ 0.22
HERPUD2-207ENST00000603731 GNAI1P63096 354 aa16.44■□□□□ 0.22
HERPUD2-207ENST00000603731 THUMPD2Q9BTF0 503 aaKnown RBP16.44■□□□□ 0.22
HERPUD2-207ENST00000603731 STRN4Q9NRL3 753 aa16.44■□□□□ 0.22
HERPUD2-207ENST00000603731 MAP3K5Q99683 1374 aa16.43■□□□□ 0.22
HERPUD2-207ENST00000603731 DCTN1Q14203 1278 aa16.43■□□□□ 0.22
HERPUD2-207ENST00000603731 IFT57Q9NWB7 429 aa16.43■□□□□ 0.22
HERPUD2-207ENST00000603731 VIRMAQ69YN4 1812 aaKnown RBP16.42■□□□□ 0.22
HERPUD2-207ENST00000603731 ONECUT3O60422 494 aaPredicted RBP16.42■□□□□ 0.22
HERPUD2-207ENST00000603731 C1orf141Q5JVX7 400 aa16.42■□□□□ 0.22
HERPUD2-207ENST00000603731 ZNF530Q6P9A1 599 aaPredicted RBP16.42■□□□□ 0.22
HERPUD2-207ENST00000603731 FANCIQ9NVI1 1328 aa16.42■□□□□ 0.22
HERPUD2-207ENST00000603731 PARP4Q9UKK3 1724 aaKnown RBP16.42■□□□□ 0.22
HERPUD2-207ENST00000603731 PLCH1Q4KWH8 1693 aa16.41■□□□□ 0.22
HERPUD2-207ENST00000603731 FKBP8Q14318 412 aa16.41■□□□□ 0.22
HERPUD2-207ENST00000603731 VPS72Q15906 364 aa16.41■□□□□ 0.22
HERPUD2-207ENST00000603731 MCM10Q7L590 875 aa16.41■□□□□ 0.22
HERPUD2-207ENST00000603731 TSR2Q969E8 191 aaKnown RBP16.41■□□□□ 0.22
HERPUD2-207ENST00000603731 BTG4Q9NY30 223 aa16.41■□□□□ 0.22
HERPUD2-207ENST00000603731 TNS1Q9HBL0 1735 aaKnown RBP16.4■□□□□ 0.22
HERPUD2-207ENST00000603731 AKAP4Q5JQC9 854 aa16.4■□□□□ 0.22
HERPUD2-207ENST00000603731 CFAP44Q96MT7 982 aa16.4■□□□□ 0.22
HERPUD2-207ENST00000603731 CARD10Q9BWT7 1032 aa16.4■□□□□ 0.22
HERPUD2-207ENST00000603731 SPG7Q9UQ90 795 aa16.4■□□□□ 0.22
HERPUD2-207ENST00000603731 PLEKHG2Q9H7P9 1386 aa16.39■□□□□ 0.21
HERPUD2-207ENST00000603731 DISP2A7MBM2 1401 aa16.38■□□□□ 0.21
HERPUD2-207ENST00000603731 CT47B1P0C2W7 299 aaPredicted RBP16.38■□□□□ 0.21
HERPUD2-207ENST00000603731 EXOSC9Q06265 439 aaKnown RBP16.38■□□□□ 0.21
HERPUD2-207ENST00000603731 LARP1Q6PKG0 1096 aaKnown RBP16.38■□□□□ 0.21
HERPUD2-207ENST00000603731 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.38■□□□□ 0.21
HERPUD2-207ENST00000603731 CCDC9Q9Y3X0 531 aaKnown RBP16.38■□□□□ 0.21
HERPUD2-207ENST00000603731 RNF123Q5XPI4 1314 aa16.38■□□□□ 0.21
HERPUD2-207ENST00000603731 CRB1P82279 1406 aa16.37■□□□□ 0.21
HERPUD2-207ENST00000603731 PKD1L3Q7Z443 1732 aa16.37■□□□□ 0.21
HERPUD2-207ENST00000603731 NWD2Q9ULI1 1742 aa16.37■□□□□ 0.21
HERPUD2-207ENST00000603731 MEGF6O75095 1541 aa16.37■□□□□ 0.21
HERPUD2-207ENST00000603731 ZNF853P0CG23 659 aa16.37■□□□□ 0.21
HERPUD2-207ENST00000603731 RRP1P56182 461 aaKnown RBP16.37■□□□□ 0.21
HERPUD2-207ENST00000603731 GOLGA6L2Q8N9W4 650 aaPredicted RBP16.37■□□□□ 0.21
HERPUD2-207ENST00000603731 LRRC37A3O60309 1634 aa16.37■□□□□ 0.21
HERPUD2-207ENST00000603731 A0A0G2JS52 829 aa16.36■□□□□ 0.21
HERPUD2-207ENST00000603731 IRX6P78412 446 aaPredicted RBP16.36■□□□□ 0.21
HERPUD2-207ENST00000603731 MYT1Q01538 1121 aa16.36■□□□□ 0.21
HERPUD2-207ENST00000603731 EZH2Q15910 746 aaKnown RBP16.36■□□□□ 0.21
HERPUD2-207ENST00000603731 ZNF784Q8NCA9 323 aaPredicted RBP16.36■□□□□ 0.21
HERPUD2-207ENST00000603731 MBIPQ9NS73 344 aa16.36■□□□□ 0.21
HERPUD2-207ENST00000603731 IL2RBP14784 551 aa16.35■□□□□ 0.21
HERPUD2-207ENST00000603731 IL17REQ8NFR9 667 aa16.35■□□□□ 0.21
HERPUD2-207ENST00000603731 NRAPQ86VF7 1730 aa16.35■□□□□ 0.21
HERPUD2-207ENST00000603731 DCAF8L1A6NGE4 600 aa16.34■□□□□ 0.21
HERPUD2-207ENST00000603731 CHL1O00533 1208 aa16.34■□□□□ 0.21
HERPUD2-207ENST00000603731 FAM182BQ5T319 152 aa16.34■□□□□ 0.21
HERPUD2-207ENST00000603731 TSPYL4Q9UJ04 414 aa16.34■□□□□ 0.21
HERPUD2-207ENST00000603731 OVOS2A0A0G2JMS6 1433 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms