RNA–Protein interactions for RNA: ENST00000603639.5

NEB-218, Transcript of nebulin, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEB, Length 25,578 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEB-218ENST00000603639 CUX2O14529 1486 aa3.96□□□□□ -1.77
NEB-218ENST00000603639 SNAPC4Q5SXM2 1469 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 KIF4AO95239 1232 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 RLBP1P12271 317 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 KIAA0753Q2KHM9 967 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 RPUSD2Q8IZ73 545 aaKnown RBP3.96□□□□□ -1.78
NEB-218ENST00000603639 ATP6V1AP38606 617 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 WASF1Q92558 559 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 TERF2IPQ9NYB0 399 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 MAPK8IP2Q13387 824 aaPredicted RBP3.96□□□□□ -1.78
NEB-218ENST00000603639 PPP2R5EQ16537 467 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 DCAF11Q8TEB1 546 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 CTAGE1Q96RT6 745 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 ARHGAP25P42331 645 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 PSMD7P51665 324 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 RNF10Q8N5U6 811 aaKnown RBP3.96□□□□□ -1.78
NEB-218ENST00000603639 FAM114A1Q8IWE2 563 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 GCOM1H8Y6P7 765 aaPredicted RBP3.96□□□□□ -1.78
NEB-218ENST00000603639 MYZAPP0CAP1 466 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 TDO2P48775 406 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 MORC2Q9Y6X9 1032 aaPredicted RBP3.96□□□□□ -1.78
NEB-218ENST00000603639 ANKRD62A6NC57 917 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 ARMC9Q7Z3E5 817 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 SUPT6HQ7KZ85 1726 aaKnown RBP3.96□□□□□ -1.78
NEB-218ENST00000603639 RAB11FIP4Q86YS3 637 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 CCDC102AQ96A19 550 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 ANKRD30BQ9BXX2 1392 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 CEP112Q8N8E3 955 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 NLRP13Q86W25 1043 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 FOXP2O15409 715 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 ZKSCAN8Q15776 578 aaPredicted RBP3.96□□□□□ -1.78
NEB-218ENST00000603639 TEX9Q8N6V9 391 aa3.96□□□□□ -1.78
NEB-218ENST00000603639 C16orf45Q96MC5 204 aaPredicted RBP3.96□□□□□ -1.78
NEB-218ENST00000603639 KRT83P78385 493 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 ALS2CLQ60I27 953 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 U2AF1L5P0DN76 240 aaPredicted RBP3.95□□□□□ -1.78
NEB-218ENST00000603639 U2AF1Q01081 240 aaKnown RBP eCLIP3.95□□□□□ -1.78
NEB-218ENST00000603639 ARFGAP2Q8N6H7 521 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 CTTNBP2NLQ9P2B4 639 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 ZBTB17Q13105 803 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 SMC1AQ14683 1233 aaKnown RBP3.95□□□□□ -1.78
NEB-218ENST00000603639 SLMAPQ14BN4 828 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 RNF187Q5TA31 235 aaPredicted RBP3.95□□□□□ -1.78
NEB-218ENST00000603639 KRT222Q8N1A0 295 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 MIS12Q9H081 205 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 CNTLNQ9NXG0 1405 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 RSPH14Q9UHP6 348 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 RRBP1Q9P2E9 1410 aaKnown RBP3.95□□□□□ -1.78
NEB-218ENST00000603639 NESP48681 1621 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 MPHOSPH10O00566 681 aaKnown RBP3.95□□□□□ -1.78
NEB-218ENST00000603639 SPECC1LQ69YQ0 1117 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 CEP128Q6ZU80 1094 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 CLIP2Q9UDT6 1046 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 CPLX4Q7Z7G2 160 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 CNPY4Q8N129 248 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 CTTNBP2Q8WZ74 1663 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 GABPB1Q06547 395 aaPredicted RBP3.95□□□□□ -1.78
NEB-218ENST00000603639 CEP131Q9UPN4 1083 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 IFT74Q96LB3 600 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 NUCB1Q02818 461 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 RUFY4Q6ZNE9 571 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 NUP133Q8WUM0 1156 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 TRIM35Q9UPQ4 493 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 RBBP5Q15291 538 aaKnown RBP3.95□□□□□ -1.78
NEB-218ENST00000603639 C6orf163Q5TEZ5 329 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 PSMD1Q99460 953 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 TTC12Q9H892 705 aaPredicted RBP3.95□□□□□ -1.78
NEB-218ENST00000603639 CCDC38Q502W7 563 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 RSRC1Q96IZ7 334 aaKnown RBP3.95□□□□□ -1.78
NEB-218ENST00000603639 CYP46A1Q9Y6A2 500 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 POTEJP0CG39 1038 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 JAKMIP2Q96AA8 810 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 RNF14Q9UBS8 474 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 STAMBPO95630 424 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 NUP58Q9BVL2 599 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 CCDC7Q96M83 1385 aa3.95□□□□□ -1.78
NEB-218ENST00000603639 ERICH2A1L162 156 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 LRCH2Q5VUJ6 765 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 PPFIA1Q13136 1202 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 CFAP43Q8NDM7 1665 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 INSRP06213 1382 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 CFAP74Q9C0B2 1584 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 MTUS2Q5JR59 1369 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 DNAJC8O75937 253 aaPredicted RBP3.94□□□□□ -1.78
NEB-218ENST00000603639 CCDC102BQ68D86 513 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 SMARCC1Q92922 1105 aaPredicted RBP3.94□□□□□ -1.78
NEB-218ENST00000603639 THEGQ9P2T0 379 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 ADAMTS8Q9UP79 889 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 CPLX1O14810 134 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 MYO1BO43795 1136 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 IFT20Q8IY31 132 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 SAAL1Q96ER3 474 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 DZIP1Q86YF9 867 aaKnown RBP3.94□□□□□ -1.78
NEB-218ENST00000603639 IRX4P78413 519 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 MAP7D1Q3KQU3 841 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 DHX29Q7Z478 1369 aaKnown RBP3.94□□□□□ -1.78
NEB-218ENST00000603639 A0A087WUV0 522 aaPredicted RBP3.94□□□□□ -1.78
NEB-218ENST00000603639 MPNDQ8N594 471 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 GDAP1L1Q96MZ0 367 aa3.94□□□□□ -1.78
NEB-218ENST00000603639 EIF4G1Q04637 1599 aaKnown RBP3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms