RNA–Protein interactions for RNA: ENST00000602897.1

PPFIA3-212, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 1,615 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-212ENST00000602897 FLT4P35916 1363 aa29.19■■■□□ 2.26
PPFIA3-212ENST00000602897 CRB1P82279 1406 aa29.18■■■□□ 2.26
PPFIA3-212ENST00000602897 MAP3K19Q56UN5 1328 aa29.18■■■□□ 2.26
PPFIA3-212ENST00000602897 BARGINQ6ZT62 677 aa29.18■■■□□ 2.26
PPFIA3-212ENST00000602897 TOM1L2Q6ZVM7 507 aa29.17■■■□□ 2.26
PPFIA3-212ENST00000602897 TMPOP42166 694 aaKnown RBP29.16■■■□□ 2.26
PPFIA3-212ENST00000602897 THSD7AQ9UPZ6 1657 aa29.16■■■□□ 2.26
PPFIA3-212ENST00000602897 PEAK1Q9H792 1746 aa29.16■■■□□ 2.26
PPFIA3-212ENST00000602897 WDR17Q8IZU2 1322 aa29.16■■■□□ 2.26
PPFIA3-212ENST00000602897 THRAP3Q9Y2W1 955 aaKnown RBP29.16■■■□□ 2.26
PPFIA3-212ENST00000602897 CSB-PGBD3P0DP91 1061 aa29.15■■■□□ 2.26
PPFIA3-212ENST00000602897 EIF4A2Q14240 407 aaKnown RBP29.14■■■□□ 2.26
PPFIA3-212ENST00000602897 PRKAR2BP31323 418 aa29.13■■■□□ 2.25
PPFIA3-212ENST00000602897 AMPHP49418 695 aa29.13■■■□□ 2.25
PPFIA3-212ENST00000602897 RRP7AQ9Y3A4 280 aaKnown RBP29.13■■■□□ 2.25
PPFIA3-212ENST00000602897 ABCC6O95255 1503 aa29.13■■■□□ 2.25
PPFIA3-212ENST00000602897 NEUROD2Q15784 382 aa29.12■■■□□ 2.25
PPFIA3-212ENST00000602897 CCDC125Q86Z20 511 aa29.12■■■□□ 2.25
PPFIA3-212ENST00000602897 RTL1A6NKG5 1358 aa29.12■■■□□ 2.25
PPFIA3-212ENST00000602897 HSP90AB2PQ58FF8 381 aa29.11■■■□□ 2.25
PPFIA3-212ENST00000602897 FAM182BQ5T319 152 aa29.1■■■□□ 2.25
PPFIA3-212ENST00000602897 IL16Q14005 1332 aa29.09■■■□□ 2.25
PPFIA3-212ENST00000602897 RGPD5Q99666 1765 aa29.09■■■□□ 2.25
PPFIA3-212ENST00000602897 RGPD1P0DJD0 1748 aa29.08■■■□□ 2.25
PPFIA3-212ENST00000602897 LTN1O94822 1766 aa29.08■■■□□ 2.25
PPFIA3-212ENST00000602897 HMOX1P09601 288 aa29.07■■■□□ 2.24
PPFIA3-212ENST00000602897 RIPK4P57078 832 aa29.07■■■□□ 2.24
PPFIA3-212ENST00000602897 CARD10Q9BWT7 1032 aa29.07■■■□□ 2.24
PPFIA3-212ENST00000602897 MYH16Q9H6N6 1097 aa29.07■■■□□ 2.24
PPFIA3-212ENST00000602897 SPINK5Q9NQ38 1064 aaPredicted RBP29.07■■■□□ 2.24
PPFIA3-212ENST00000602897 RRP1P56182 461 aaKnown RBP29.06■■■□□ 2.24
PPFIA3-212ENST00000602897 NFE2L2Q16236 605 aa29.06■■■□□ 2.24
PPFIA3-212ENST00000602897 TRIM35Q9UPQ4 493 aa29.06■■■□□ 2.24
PPFIA3-212ENST00000602897 ERBB3P21860 1342 aa29.06■■■□□ 2.24
PPFIA3-212ENST00000602897 HOXC9P31274 260 aa29.05■■■□□ 2.24
PPFIA3-212ENST00000602897 IP6K1Q92551 441 aa29.05■■■□□ 2.24
PPFIA3-212ENST00000602897 ANKRD24Q8TF21 1146 aa29.04■■■□□ 2.24
PPFIA3-212ENST00000602897 SF3B2Q13435 895 aaKnown RBP29.03■■■□□ 2.24
PPFIA3-212ENST00000602897 LMOD3Q0VAK6 560 aa29.02■■■□□ 2.24
PPFIA3-212ENST00000602897 NLRP2Q9NX02 1062 aa29.02■■■□□ 2.24
PPFIA3-212ENST00000602897 CALD1Q05682 793 aaKnown RBP29.02■■■□□ 2.24
PPFIA3-212ENST00000602897 SULT6B1Q6IMI4 303 aa29.02■■■□□ 2.24
PPFIA3-212ENST00000602897 PHACTR3Q96KR7 559 aa29.02■■■□□ 2.24
PPFIA3-212ENST00000602897 IRX6P78412 446 aaPredicted RBP29■■■□□ 2.23
PPFIA3-212ENST00000602897 FAM196AQ6ZSG2 479 aa29■■■□□ 2.23
PPFIA3-212ENST00000602897 CDCA7Q9BWT1 371 aaPredicted RBP29■■■□□ 2.23
PPFIA3-212ENST00000602897 IGSF1Q8N6C5 1336 aa28.99■■■□□ 2.23
PPFIA3-212ENST00000602897 PPP4R2Q9NY27 417 aa28.99■■■□□ 2.23
PPFIA3-212ENST00000602897 KDRP35968 1356 aa28.99■■■□□ 2.23
PPFIA3-212ENST00000602897 DDB1Q16531 1140 aa28.98■■■□□ 2.23
PPFIA3-212ENST00000602897 LTV1Q96GA3 475 aaPredicted RBP28.98■■■□□ 2.23
PPFIA3-212ENST00000602897 PARP4Q9UKK3 1724 aaKnown RBP28.97■■■□□ 2.23
PPFIA3-212ENST00000602897 CT47B1P0C2W7 299 aaPredicted RBP28.96■■■□□ 2.23
PPFIA3-212ENST00000602897 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.96■■■□□ 2.23
PPFIA3-212ENST00000602897 DEFB132Q7Z7B7 95 aa28.95■■■□□ 2.23
PPFIA3-212ENST00000602897 EYA1Q99502 592 aa28.94■■■□□ 2.22
PPFIA3-212ENST00000602897 DISP2A7MBM2 1401 aa28.94■■■□□ 2.22
PPFIA3-212ENST00000602897 AEBP1Q8IUX7 1158 aa28.94■■■□□ 2.22
PPFIA3-212ENST00000602897 LRRC37A3O60309 1634 aa28.92■■■□□ 2.22
PPFIA3-212ENST00000602897 TRIM37O94972 964 aa28.91■■■□□ 2.22
PPFIA3-212ENST00000602897 BAG6P46379 1132 aa28.91■■■□□ 2.22
PPFIA3-212ENST00000602897 WNK3Q9BYP7 1800 aa28.9■■■□□ 2.22
PPFIA3-212ENST00000602897 EXOC5O00471 708 aa28.9■■■□□ 2.22
PPFIA3-212ENST00000602897 IL2RBP14784 551 aa28.89■■■□□ 2.22
PPFIA3-212ENST00000602897 OVOS2A0A0G2JMS6 1433 aa28.87■■■□□ 2.21
PPFIA3-212ENST00000602897 FANCIQ9NVI1 1328 aa28.87■■■□□ 2.21
PPFIA3-212ENST00000602897 GNAI1P63096 354 aa28.86■■■□□ 2.21
PPFIA3-212ENST00000602897 MARCH10Q8NA82 808 aaPredicted RBP28.86■■■□□ 2.21
PPFIA3-212ENST00000602897 IFT57Q9NWB7 429 aa28.86■■■□□ 2.21
PPFIA3-212ENST00000602897 DLG5Q8TDM6 1919 aa28.86■■■□□ 2.21
PPFIA3-212ENST00000602897 GAS2L2Q8NHY3 880 aa28.85■■■□□ 2.21
PPFIA3-212ENST00000602897 FAM208AQ9UK61 1670 aaKnown RBP28.84■■■□□ 2.21
PPFIA3-212ENST00000602897 TNS2Q63HR2 1409 aa28.83■■■□□ 2.21
PPFIA3-212ENST00000602897 EN1Q05925 392 aaPredicted RBP28.83■■■□□ 2.21
PPFIA3-212ENST00000602897 HTATSF1O43719 755 aaKnown RBP28.82■■■□□ 2.2
PPFIA3-212ENST00000602897 APBA3O96018 575 aa28.81■■■□□ 2.2
PPFIA3-212ENST00000602897 ZNF853P0CG23 659 aa28.81■■■□□ 2.2
PPFIA3-212ENST00000602897 NBPF6Q5VWK0 638 aa28.81■■■□□ 2.2
PPFIA3-212ENST00000602897 NBPF4Q96M43 638 aa28.81■■■□□ 2.2
PPFIA3-212ENST00000602897 RARSP54136 660 aaKnown RBP28.8■■■□□ 2.2
PPFIA3-212ENST00000602897 TNS1Q9HBL0 1735 aaKnown RBP28.8■■■□□ 2.2
PPFIA3-212ENST00000602897 ZNF428Q96B54 188 aa28.8■■■□□ 2.2
PPFIA3-212ENST00000602897 CFAP44Q96MT7 982 aa28.8■■■□□ 2.2
PPFIA3-212ENST00000602897 TSR2Q969E8 191 aaKnown RBP28.79■■■□□ 2.2
PPFIA3-212ENST00000602897 NCAPD2Q15021 1401 aa28.78■■■□□ 2.2
PPFIA3-212ENST00000602897 PLIN1O60240 522 aa28.77■■■□□ 2.2
PPFIA3-212ENST00000602897 EXOSC9Q06265 439 aaKnown RBP28.77■■■□□ 2.2
PPFIA3-212ENST00000602897 MTHFSDQ2M296 383 aaKnown RBP28.77■■■□□ 2.2
PPFIA3-212ENST00000602897 USHBP1Q8N6Y0 703 aa28.77■■■□□ 2.2
PPFIA3-212ENST00000602897 BCAR3O75815 825 aa28.76■■■□□ 2.19
PPFIA3-212ENST00000602897 BCL9O00512 1426 aa28.75■■■□□ 2.19
PPFIA3-212ENST00000602897 RGPD2P0DJD1 1756 aa28.75■■■□□ 2.19
PPFIA3-212ENST00000602897 PDE3AQ14432 1141 aa28.75■■■□□ 2.19
PPFIA3-212ENST00000602897 EZH2Q15910 746 aaKnown RBP28.74■■■□□ 2.19
PPFIA3-212ENST00000602897 RTF1Q92541 710 aaKnown RBP28.73■■■□□ 2.19
PPFIA3-212ENST00000602897 CAMKK2Q96RR4 588 aa28.73■■■□□ 2.19
PPFIA3-212ENST00000602897 EXOC6Q8TAG9 804 aa28.72■■■□□ 2.19
PPFIA3-212ENST00000602897 BCL11BQ9C0K0 894 aaPredicted RBP28.72■■■□□ 2.19
PPFIA3-212ENST00000602897 DDX54Q8TDD1 881 aaKnown RBP28.72■■■□□ 2.19
PPFIA3-212ENST00000602897 RAPGEF4Q8WZA2 1011 aa28.72■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms