RNA–Protein interactions for RNA: ENST00000602204.1

SIN3B-212, Transcript of SIN3 transcription regulator family member B, humanhuman

TSL 2

Gene SIN3B, Length 517 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3B-212ENST00000602204 MAP3K5Q99683 1374 aa25.77■■□□□ 1.72
SIN3B-212ENST00000602204 CRB1P82279 1406 aa25.77■■□□□ 1.72
SIN3B-212ENST00000602204 RAPGEF4Q8WZA2 1011 aa25.76■■□□□ 1.71
SIN3B-212ENST00000602204 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP25.76■■□□□ 1.71
SIN3B-212ENST00000602204 SCN11AQ9UI33 1791 aa25.75■■□□□ 1.71
SIN3B-212ENST00000602204 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.75■■□□□ 1.71
SIN3B-212ENST00000602204 MEGF6O75095 1541 aa25.75■■□□□ 1.71
SIN3B-212ENST00000602204 OVOS2A0A0G2JMS6 1433 aa25.74■■□□□ 1.71
SIN3B-212ENST00000602204 TATP17735 454 aaPredicted RBP25.74■■□□□ 1.71
SIN3B-212ENST00000602204 EVA1CP58658 441 aa25.74■■□□□ 1.71
SIN3B-212ENST00000602204 TOM1L2Q6ZVM7 507 aa25.74■■□□□ 1.71
SIN3B-212ENST00000602204 BTG4Q9NY30 223 aa25.74■■□□□ 1.71
SIN3B-212ENST00000602204 SLIT2O94813 1529 aa25.73■■□□□ 1.71
SIN3B-212ENST00000602204 GNAT3A8MTJ3 354 aa25.73■■□□□ 1.71
SIN3B-212ENST00000602204 RTF1Q92541 710 aaKnown RBP25.73■■□□□ 1.71
SIN3B-212ENST00000602204 IFT57Q9NWB7 429 aa25.73■■□□□ 1.71
SIN3B-212ENST00000602204 SHANK3Q9BYB0 1731 aa25.72■■□□□ 1.71
SIN3B-212ENST00000602204 GNAI1P63096 354 aa25.72■■□□□ 1.71
SIN3B-212ENST00000602204 SIPA1L3O60292 1781 aaPredicted RBP25.71■■□□□ 1.71
SIN3B-212ENST00000602204 ZNF853P0CG23 659 aa25.7■■□□□ 1.7
SIN3B-212ENST00000602204 AKAP4Q5JQC9 854 aa25.7■■□□□ 1.7
SIN3B-212ENST00000602204 HSPA1LP34931 641 aa25.69■■□□□ 1.7
SIN3B-212ENST00000602204 LARP1Q6PKG0 1096 aaKnown RBP25.69■■□□□ 1.7
SIN3B-212ENST00000602204 STRN4Q9NRL3 753 aa25.69■■□□□ 1.7
SIN3B-212ENST00000602204 FANCIQ9NVI1 1328 aa25.68■■□□□ 1.7
SIN3B-212ENST00000602204 ADAMTS2O95450 1211 aa25.68■■□□□ 1.7
SIN3B-212ENST00000602204 CT47B1P0C2W7 299 aaPredicted RBP25.68■■□□□ 1.7
SIN3B-212ENST00000602204 ZNF530Q6P9A1 599 aaPredicted RBP25.68■■□□□ 1.7
SIN3B-212ENST00000602204 CFAP44Q96MT7 982 aa25.68■■□□□ 1.7
SIN3B-212ENST00000602204 RCAN3Q9UKA8 241 aa25.68■■□□□ 1.7
SIN3B-212ENST00000602204 SPG7Q9UQ90 795 aa25.68■■□□□ 1.7
SIN3B-212ENST00000602204 RNF123Q5XPI4 1314 aa25.67■■□□□ 1.7
SIN3B-212ENST00000602204 NUTM2BA6NNL0 878 aaPredicted RBP25.67■■□□□ 1.7
SIN3B-212ENST00000602204 NUTM2EB1AL46 878 aaPredicted RBP25.67■■□□□ 1.7
SIN3B-212ENST00000602204 NUTM2AQ8IVF1 878 aaPredicted RBP25.67■■□□□ 1.7
SIN3B-212ENST00000602204 CEMIPQ8WUJ3 1361 aa25.67■■□□□ 1.7
SIN3B-212ENST00000602204 C1orf141Q5JVX7 400 aa25.66■■□□□ 1.7
SIN3B-212ENST00000602204 LRP6O75581 1613 aa25.66■■□□□ 1.7
SIN3B-212ENST00000602204 KDM3BQ7LBC6 1761 aa25.65■■□□□ 1.7
SIN3B-212ENST00000602204 THUMPD2Q9BTF0 503 aaKnown RBP25.65■■□□□ 1.7
SIN3B-212ENST00000602204 BABAM1Q9NWV8 329 aa25.65■■□□□ 1.7
SIN3B-212ENST00000602204 SUPT16HQ9Y5B9 1047 aaKnown RBP25.65■■□□□ 1.7
SIN3B-212ENST00000602204 IL2RBP14784 551 aa25.64■■□□□ 1.7
SIN3B-212ENST00000602204 DCTN1Q14203 1278 aa25.64■■□□□ 1.7
SIN3B-212ENST00000602204 MCM10Q7L590 875 aa25.64■■□□□ 1.7
SIN3B-212ENST00000602204 DISP2A7MBM2 1401 aa25.63■■□□□ 1.69
SIN3B-212ENST00000602204 CHL1O00533 1208 aa25.61■■□□□ 1.69
SIN3B-212ENST00000602204 IL17REQ8NFR9 667 aa25.61■■□□□ 1.69
SIN3B-212ENST00000602204 THRAP3Q9Y2W1 955 aaKnown RBP25.61■■□□□ 1.69
SIN3B-212ENST00000602204 IFNL2Q8IZJ0 200 aa25.6■■□□□ 1.69
SIN3B-212ENST00000602204 TSR2Q969E8 191 aaKnown RBP25.6■■□□□ 1.69
SIN3B-212ENST00000602204 CACNA1FO60840 1977 aa25.6■■□□□ 1.69
SIN3B-212ENST00000602204 NEFLP07196 543 aa25.59■■□□□ 1.69
SIN3B-212ENST00000602204 HSP90AB1P08238 724 aaKnown RBP25.59■■□□□ 1.69
SIN3B-212ENST00000602204 CDCA7Q9BWT1 371 aaPredicted RBP25.59■■□□□ 1.69
SIN3B-212ENST00000602204 MBIPQ9NS73 344 aa25.59■■□□□ 1.69
SIN3B-212ENST00000602204 PCDH11XQ9BZA7 1347 aa25.59■■□□□ 1.69
SIN3B-212ENST00000602204 PCDH11YQ9BZA8 1340 aa25.59■■□□□ 1.69
SIN3B-212ENST00000602204 MRC1P22897 1456 aa25.59■■□□□ 1.69
SIN3B-212ENST00000602204 PHKG2P15735 406 aa25.58■■□□□ 1.69
SIN3B-212ENST00000602204 FNBP4Q8N3X1 1017 aaPredicted RBP25.58■■□□□ 1.69
SIN3B-212ENST00000602204 UNC5CLQ8IV45 518 aa25.57■■□□□ 1.68
SIN3B-212ENST00000602204 ZCRB1Q8TBF4 217 aaKnown RBP25.57■■□□□ 1.68
SIN3B-212ENST00000602204 ZNF428Q96B54 188 aa25.57■■□□□ 1.68
SIN3B-212ENST00000602204 LAS1LQ9Y4W2 734 aaKnown RBP25.57■■□□□ 1.68
SIN3B-212ENST00000602204 BCL9LQ86UU0 1499 aa25.57■■□□□ 1.68
SIN3B-212ENST00000602204 SPATA31A1Q5TZJ5 1347 aa25.57■■□□□ 1.68
SIN3B-212ENST00000602204 RNMTO43148 476 aaKnown RBP25.56■■□□□ 1.68
SIN3B-212ENST00000602204 EXOSC9Q06265 439 aaKnown RBP25.56■■□□□ 1.68
SIN3B-212ENST00000602204 SPATA31A5Q5VU36 1347 aa25.56■■□□□ 1.68
SIN3B-212ENST00000602204 SPATA31A7Q8IWB4 1347 aa25.56■■□□□ 1.68
SIN3B-212ENST00000602204 TAF7Q15545 349 aaPredicted RBP25.55■■□□□ 1.68
SIN3B-212ENST00000602204 NGLY1Q96IV0 654 aa25.55■■□□□ 1.68
SIN3B-212ENST00000602204 KDM6AO15550 1401 aaPredicted RBP25.54■■□□□ 1.68
SIN3B-212ENST00000602204 CYP27B1O15528 508 aa25.53■■□□□ 1.68
SIN3B-212ENST00000602204 RRP1P56182 461 aaKnown RBP25.53■■□□□ 1.68
SIN3B-212ENST00000602204 DCAF5Q96JK2 942 aa25.53■■□□□ 1.68
SIN3B-212ENST00000602204 C8orf37Q96NL8 207 aa25.53■■□□□ 1.68
SIN3B-212ENST00000602204 GTF3C3Q9Y5Q9 886 aa25.53■■□□□ 1.68
SIN3B-212ENST00000602204 TEFQ10587 303 aa25.52■■□□□ 1.68
SIN3B-212ENST00000602204 VPS72Q15906 364 aa25.52■■□□□ 1.68
SIN3B-212ENST00000602204 MPRIPQ6WCQ1 1025 aa25.52■■□□□ 1.68
SIN3B-212ENST00000602204 TNS2Q63HR2 1409 aa25.52■■□□□ 1.68
SIN3B-212ENST00000602204 NKX1-1Q15270 411 aaPredicted RBP25.51■■□□□ 1.67
SIN3B-212ENST00000602204 BARGINQ6ZT62 677 aa25.51■■□□□ 1.67
SIN3B-212ENST00000602204 GOLGA6L2Q8N9W4 650 aaPredicted RBP25.51■■□□□ 1.67
SIN3B-212ENST00000602204 LGR6Q9HBX8 967 aa25.51■■□□□ 1.67
SIN3B-212ENST00000602204 TSPYL4Q9UJ04 414 aa25.51■■□□□ 1.67
SIN3B-212ENST00000602204 SOS1Q07889 1333 aaPredicted RBP25.51■■□□□ 1.67
SIN3B-212ENST00000602204 RARSP54136 660 aaKnown RBP25.5■■□□□ 1.67
SIN3B-212ENST00000602204 ITGB4P16144 1822 aa25.49■■□□□ 1.67
SIN3B-212ENST00000602204 TOGARAM1Q9Y4F4 1720 aa25.49■■□□□ 1.67
SIN3B-212ENST00000602204 USP35Q9P2H5 1018 aa25.49■■□□□ 1.67
SIN3B-212ENST00000602204 ALDH1L2Q3SY69 923 aa25.48■■□□□ 1.67
SIN3B-212ENST00000602204 MEX3CQ5U5Q3 659 aaKnown RBP25.48■■□□□ 1.67
SIN3B-212ENST00000602204 ERICH6BQ5W0A0 696 aa25.48■■□□□ 1.67
SIN3B-212ENST00000602204 PAPPAQ13219 1627 aa25.46■■□□□ 1.67
SIN3B-212ENST00000602204 THSD7AQ9UPZ6 1657 aa25.45■■□□□ 1.67
SIN3B-212ENST00000602204 VAMP4O75379 141 aa25.45■■□□□ 1.66
SIN3B-212ENST00000602204 TWISTNBQ3B726 338 aaPredicted RBP25.45■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms