RNA–Protein interactions for RNA: ENST00000600719.5

RAB11B-204, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB11B, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-204ENST00000600719 RGS12O14924 1447 aa19.52■□□□□ 0.72
RAB11B-204ENST00000600719 LRRC37A3O60309 1634 aa19.52■□□□□ 0.72
RAB11B-204ENST00000600719 TATP17735 454 aaPredicted RBP19.52■□□□□ 0.72
RAB11B-204ENST00000600719 SEPT12Q8IYM1 358 aa19.52■□□□□ 0.72
RAB11B-204ENST00000600719 WDR43Q15061 677 aaKnown RBP eCLIP19.51■□□□□ 0.71
RAB11B-204ENST00000600719 PLEKHF1Q96S99 279 aa19.51■□□□□ 0.71
RAB11B-204ENST00000600719 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.51■□□□□ 0.71
RAB11B-204ENST00000600719 PKD1L3Q7Z443 1732 aa19.51■□□□□ 0.71
RAB11B-204ENST00000600719 PRKAR2BP31323 418 aa19.5■□□□□ 0.71
RAB11B-204ENST00000600719 TNS2Q63HR2 1409 aa19.5■□□□□ 0.71
RAB11B-204ENST00000600719 PHACTR3Q96KR7 559 aa19.49■□□□□ 0.71
RAB11B-204ENST00000600719 SHANK3Q9BYB0 1731 aa19.48■□□□□ 0.71
RAB11B-204ENST00000600719 EXOC5O00471 708 aa19.48■□□□□ 0.71
RAB11B-204ENST00000600719 DDB1Q16531 1140 aa19.48■□□□□ 0.71
RAB11B-204ENST00000600719 ZCRB1Q8TBF4 217 aaKnown RBP19.48■□□□□ 0.71
RAB11B-204ENST00000600719 AMOTQ4VCS5 1084 aa19.47■□□□□ 0.71
RAB11B-204ENST00000600719 BRWD3Q6RI45 1802 aa19.46■□□□□ 0.71
RAB11B-204ENST00000600719 PLEKHO1Q53GL0 409 aaPredicted RBP19.46■□□□□ 0.71
RAB11B-204ENST00000600719 SPG7Q9UQ90 795 aa19.46■□□□□ 0.71
RAB11B-204ENST00000600719 A0A0G2JS52 829 aa19.45■□□□□ 0.7
RAB11B-204ENST00000600719 MYT1Q01538 1121 aa19.45■□□□□ 0.7
RAB11B-204ENST00000600719 PNNQ9H307 717 aaKnown RBP19.45■□□□□ 0.7
RAB11B-204ENST00000600719 CYP27B1O15528 508 aa19.44■□□□□ 0.7
RAB11B-204ENST00000600719 MTHFSDQ2M296 383 aaKnown RBP19.44■□□□□ 0.7
RAB11B-204ENST00000600719 MARCH10Q8NA82 808 aaPredicted RBP19.44■□□□□ 0.7
RAB11B-204ENST00000600719 RUNDC1Q96C34 613 aa19.43■□□□□ 0.7
RAB11B-204ENST00000600719 PCDH11XQ9BZA7 1347 aa19.43■□□□□ 0.7
RAB11B-204ENST00000600719 PCDH11YQ9BZA8 1340 aa19.43■□□□□ 0.7
RAB11B-204ENST00000600719 PDE3BQ13370 1112 aa19.42■□□□□ 0.7
RAB11B-204ENST00000600719 KRT27Q7Z3Y8 459 aa19.42■□□□□ 0.7
RAB11B-204ENST00000600719 FAM9BQ8IZU0 186 aa19.42■□□□□ 0.7
RAB11B-204ENST00000600719 PHKG2P15735 406 aa19.41■□□□□ 0.7
RAB11B-204ENST00000600719 CCDC146Q8IYE0 955 aa19.41■□□□□ 0.7
RAB11B-204ENST00000600719 DDX54Q8TDD1 881 aaKnown RBP19.41■□□□□ 0.7
RAB11B-204ENST00000600719 NKX1-1Q15270 411 aaPredicted RBP19.4■□□□□ 0.7
RAB11B-204ENST00000600719 ZNF530Q6P9A1 599 aaPredicted RBP19.4■□□□□ 0.7
RAB11B-204ENST00000600719 IFNL2Q8IZJ0 200 aa19.4■□□□□ 0.7
RAB11B-204ENST00000600719 GAS2L2Q8NHY3 880 aa19.4■□□□□ 0.7
RAB11B-204ENST00000600719 BCL9O00512 1426 aa19.4■□□□□ 0.7
RAB11B-204ENST00000600719 NFE2L2Q16236 605 aa19.38■□□□□ 0.69
RAB11B-204ENST00000600719 FAM182BQ5T319 152 aa19.38■□□□□ 0.69
RAB11B-204ENST00000600719 MAPK8IP3Q9UPT6 1336 aa19.38■□□□□ 0.69
RAB11B-204ENST00000600719 EP400Q96L91 3159 aa19.37■□□□□ 0.69
RAB11B-204ENST00000600719 NEFMP07197 916 aa19.37■□□□□ 0.69
RAB11B-204ENST00000600719 AKAP4Q5JQC9 854 aa19.37■□□□□ 0.69
RAB11B-204ENST00000600719 TMPOP42166 694 aaKnown RBP19.36■□□□□ 0.69
RAB11B-204ENST00000600719 ADAMTS7Q9UKP4 1686 aa19.36■□□□□ 0.69
RAB11B-204ENST00000600719 MAP3K5Q99683 1374 aa19.35■□□□□ 0.69
RAB11B-204ENST00000600719 APAF1O14727 1248 aa19.35■□□□□ 0.69
RAB11B-204ENST00000600719 C1orf141Q5JVX7 400 aa19.35■□□□□ 0.69
RAB11B-204ENST00000600719 KDM6AO15550 1401 aaPredicted RBP19.34■□□□□ 0.69
RAB11B-204ENST00000600719 GNAT3A8MTJ3 354 aa19.34■□□□□ 0.69
RAB11B-204ENST00000600719 HSP90AB1P08238 724 aaKnown RBP19.34■□□□□ 0.69
RAB11B-204ENST00000600719 FAM196AQ6ZSG2 479 aa19.34■□□□□ 0.69
RAB11B-204ENST00000600719 ILDR2Q71H61 639 aa19.34■□□□□ 0.69
RAB11B-204ENST00000600719 DCAF5Q96JK2 942 aa19.34■□□□□ 0.69
RAB11B-204ENST00000600719 HTATSF1O43719 755 aaKnown RBP19.33■□□□□ 0.68
RAB11B-204ENST00000600719 DLG5Q8TDM6 1919 aa19.33■□□□□ 0.68
RAB11B-204ENST00000600719 TOGARAM1Q9Y4F4 1720 aa19.32■□□□□ 0.68
RAB11B-204ENST00000600719 MPRIPQ6WCQ1 1025 aa19.32■□□□□ 0.68
RAB11B-204ENST00000600719 IL17REQ8NFR9 667 aa19.32■□□□□ 0.68
RAB11B-204ENST00000600719 RRP7AQ9Y3A4 280 aaKnown RBP19.32■□□□□ 0.68
RAB11B-204ENST00000600719 RIPK4P57078 832 aa19.31■□□□□ 0.68
RAB11B-204ENST00000600719 NCBP3Q53F19 620 aaKnown RBP19.31■□□□□ 0.68
RAB11B-204ENST00000600719 LGR6Q9HBX8 967 aa19.31■□□□□ 0.68
RAB11B-204ENST00000600719 SCN11AQ9UI33 1791 aa19.31■□□□□ 0.68
RAB11B-204ENST00000600719 CEMIPQ8WUJ3 1361 aa19.31■□□□□ 0.68
RAB11B-204ENST00000600719 SBF2Q86WG5 1849 aa19.3■□□□□ 0.68
RAB11B-204ENST00000600719 RNMTO43148 476 aaKnown RBP19.3■□□□□ 0.68
RAB11B-204ENST00000600719 TRIM35Q9UPQ4 493 aa19.3■□□□□ 0.68
RAB11B-204ENST00000600719 DOT1LQ8TEK3 1739 aa19.29■□□□□ 0.68
RAB11B-204ENST00000600719 ERVV-2B6SEH9 535 aa19.29■□□□□ 0.68
RAB11B-204ENST00000600719 MRC1P22897 1456 aa19.28■□□□□ 0.68
RAB11B-204ENST00000600719 NHSQ6T4R5 1651 aa19.28■□□□□ 0.68
RAB11B-204ENST00000600719 NEUROD2Q15784 382 aa19.28■□□□□ 0.68
RAB11B-204ENST00000600719 KCNQ2O43526 872 aa19.27■□□□□ 0.68
RAB11B-204ENST00000600719 PRIM1P49642 420 aaKnown RBP19.27■□□□□ 0.68
RAB11B-204ENST00000600719 DCTN1Q14203 1278 aa19.27■□□□□ 0.68
RAB11B-204ENST00000600719 CCDC27Q2M243 656 aa19.27■□□□□ 0.68
RAB11B-204ENST00000600719 MCM10Q7L590 875 aa19.27■□□□□ 0.68
RAB11B-204ENST00000600719 PTF1AQ7RTS3 328 aa19.27■□□□□ 0.68
RAB11B-204ENST00000600719 RTF1Q92541 710 aaKnown RBP19.27■□□□□ 0.68
RAB11B-204ENST00000600719 ACSBG1Q96GR2 724 aa19.27■□□□□ 0.68
RAB11B-204ENST00000600719 VIRMAQ69YN4 1812 aaKnown RBP19.27■□□□□ 0.68
RAB11B-204ENST00000600719 LMOD3Q0VAK6 560 aa19.26■□□□□ 0.67
RAB11B-204ENST00000600719 ITGB4P16144 1822 aa19.25■□□□□ 0.67
RAB11B-204ENST00000600719 SENP3-EIF4A1A0A087X0R7 540 aa19.25■□□□□ 0.67
RAB11B-204ENST00000600719 NGEFQ8N5V2 710 aa19.25■□□□□ 0.67
RAB11B-204ENST00000600719 BCL11BQ9C0K0 894 aaPredicted RBP19.25■□□□□ 0.67
RAB11B-204ENST00000600719 SLC52A2Q9HAB3 445 aa19.25■□□□□ 0.67
RAB11B-204ENST00000600719 NFATC2IPQ8NCF5 419 aa19.24■□□□□ 0.67
RAB11B-204ENST00000600719 PIGBQ92521 554 aa19.24■□□□□ 0.67
RAB11B-204ENST00000600719 THUMPD2Q9BTF0 503 aaKnown RBP19.24■□□□□ 0.67
RAB11B-204ENST00000600719 SIPA1L3O60292 1781 aaPredicted RBP19.24■□□□□ 0.67
RAB11B-204ENST00000600719 TRIM37O94972 964 aa19.23■□□□□ 0.67
RAB11B-204ENST00000600719 CABP4P57796 275 aa19.23■□□□□ 0.67
RAB11B-204ENST00000600719 WWC1Q8IX03 1113 aa19.23■□□□□ 0.67
RAB11B-204ENST00000600719 TMOD3Q9NYL9 352 aa19.22■□□□□ 0.67
RAB11B-204ENST00000600719 TEFQ10587 303 aa19.21■□□□□ 0.67
RAB11B-204ENST00000600719 SYTL4Q96C24 671 aaPredicted RBP19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms