RNA–Protein interactions for RNA: ENST00000600383.1

HIF3A-218, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 2 BASIC

Gene HIF3A, Length 2,101 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-218ENST00000600383 TWISTNBQ3B726 338 aaPredicted RBP19.48■□□□□ 0.71
HIF3A-218ENST00000600383 TCERG1O14776 1098 aaKnown RBP19.47■□□□□ 0.71
HIF3A-218ENST00000600383 RLBP1P12271 317 aa19.47■□□□□ 0.71
HIF3A-218ENST00000600383 CHRNA2Q15822 529 aa19.47■□□□□ 0.71
HIF3A-218ENST00000600383 NOB1Q9ULX3 412 aaKnown RBP19.47■□□□□ 0.71
HIF3A-218ENST00000600383 CHL1O00533 1208 aa19.46■□□□□ 0.71
HIF3A-218ENST00000600383 FTSJ3Q8IY81 847 aaKnown RBP19.46■□□□□ 0.71
HIF3A-218ENST00000600383 TSHZ2Q9NRE2 1034 aa19.46■□□□□ 0.71
HIF3A-218ENST00000600383 HAP1P54257 671 aaPredicted RBP19.45■□□□□ 0.7
HIF3A-218ENST00000600383 ALDH1L2Q3SY69 923 aa19.45■□□□□ 0.7
HIF3A-218ENST00000600383 KRT24Q2M2I5 525 aa19.44■□□□□ 0.7
HIF3A-218ENST00000600383 RGPD2P0DJD1 1756 aa19.44■□□□□ 0.7
HIF3A-218ENST00000600383 HTATSF1O43719 755 aaKnown RBP19.43■□□□□ 0.7
HIF3A-218ENST00000600383 CSB-PGBD3P0DP91 1061 aa19.43■□□□□ 0.7
HIF3A-218ENST00000600383 DZIP1LQ8IYY4 767 aaKnown RBP19.43■□□□□ 0.7
HIF3A-218ENST00000600383 ZNF428Q96B54 188 aa19.43■□□□□ 0.7
HIF3A-218ENST00000600383 NLRP2Q9NX02 1062 aa19.43■□□□□ 0.7
HIF3A-218ENST00000600383 SOS2Q07890 1332 aaPredicted RBP19.43■□□□□ 0.7
HIF3A-218ENST00000600383 PHRF1Q9P1Y6 1649 aaKnown RBP19.43■□□□□ 0.7
HIF3A-218ENST00000600383 ERBB3P21860 1342 aa19.43■□□□□ 0.7
HIF3A-218ENST00000600383 TRIM27P14373 513 aa19.43■□□□□ 0.7
HIF3A-218ENST00000600383 IL17REQ8NFR9 667 aa19.43■□□□□ 0.7
HIF3A-218ENST00000600383 TSPYL4Q9UJ04 414 aa19.43■□□□□ 0.7
HIF3A-218ENST00000600383 CRB1P82279 1406 aa19.42■□□□□ 0.7
HIF3A-218ENST00000600383 ATF7IPQ6VMQ6 1270 aa19.42■□□□□ 0.7
HIF3A-218ENST00000600383 MAP3K5Q99683 1374 aa19.42■□□□□ 0.7
HIF3A-218ENST00000600383 IPO8O15397 1037 aaKnown RBP19.42■□□□□ 0.7
HIF3A-218ENST00000600383 KIAA0232Q92628 1395 aa19.41■□□□□ 0.7
HIF3A-218ENST00000600383 MYT1Q01538 1121 aa19.41■□□□□ 0.7
HIF3A-218ENST00000600383 PLEKHO1Q53GL0 409 aaPredicted RBP19.41■□□□□ 0.7
HIF3A-218ENST00000600383 KIF16BQ96L93 1317 aa19.41■□□□□ 0.7
HIF3A-218ENST00000600383 MS4A1P11836 297 aa19.4■□□□□ 0.7
HIF3A-218ENST00000600383 RGPD5Q99666 1765 aa19.4■□□□□ 0.7
HIF3A-218ENST00000600383 ZNF530Q6P9A1 599 aaPredicted RBP19.39■□□□□ 0.69
HIF3A-218ENST00000600383 MRPL50Q8N5N7 158 aaKnown RBP19.39■□□□□ 0.69
HIF3A-218ENST00000600383 AMOTQ4VCS5 1084 aa19.38■□□□□ 0.69
HIF3A-218ENST00000600383 LGR6Q9HBX8 967 aa19.38■□□□□ 0.69
HIF3A-218ENST00000600383 PRDM11Q9NQV5 511 aa19.38■□□□□ 0.69
HIF3A-218ENST00000600383 MVPQ14764 893 aaKnown RBP19.37■□□□□ 0.69
HIF3A-218ENST00000600383 ITPRIPQ8IWB1 547 aa19.37■□□□□ 0.69
HIF3A-218ENST00000600383 TAF7Q15545 349 aaPredicted RBP19.37■□□□□ 0.69
HIF3A-218ENST00000600383 MPRIPQ6WCQ1 1025 aa19.37■□□□□ 0.69
HIF3A-218ENST00000600383 C1orf141Q5JVX7 400 aa19.36■□□□□ 0.69
HIF3A-218ENST00000600383 RAPGEF4Q8WZA2 1011 aa19.36■□□□□ 0.69
HIF3A-218ENST00000600383 BRPF1P55201 1214 aaPredicted RBP19.35■□□□□ 0.69
HIF3A-218ENST00000600383 AKAP4Q5JQC9 854 aa19.35■□□□□ 0.69
HIF3A-218ENST00000600383 TMEM57Q8N5G2 664 aa19.35■□□□□ 0.69
HIF3A-218ENST00000600383 CENPQQ7L2Z9 268 aaPredicted RBP19.34■□□□□ 0.69
HIF3A-218ENST00000600383 CPDO75976 1380 aa19.33■□□□□ 0.69
HIF3A-218ENST00000600383 SKAP1Q86WV1 359 aa19.33■□□□□ 0.69
HIF3A-218ENST00000600383 KDM2BQ8NHM5 1336 aa19.33■□□□□ 0.68
HIF3A-218ENST00000600383 IGHDP01880 384 aa19.33■□□□□ 0.68
HIF3A-218ENST00000600383 TEFQ10587 303 aa19.32■□□□□ 0.68
HIF3A-218ENST00000600383 DDX19BQ9UMR2 479 aa19.32■□□□□ 0.68
HIF3A-218ENST00000600383 TATP17735 454 aaPredicted RBP19.31■□□□□ 0.68
HIF3A-218ENST00000600383 NCAPD2Q15021 1401 aa19.31■□□□□ 0.68
HIF3A-218ENST00000600383 ARHGAP45Q92619 1136 aa19.31■□□□□ 0.68
HIF3A-218ENST00000600383 PCDHB15Q9Y5E8 787 aa19.31■□□□□ 0.68
HIF3A-218ENST00000600383 COL18A1P39060 1754 aa19.3■□□□□ 0.68
HIF3A-218ENST00000600383 SLC4A2P04920 1241 aa19.3■□□□□ 0.68
HIF3A-218ENST00000600383 AAMPQ13685 434 aa19.3■□□□□ 0.68
HIF3A-218ENST00000600383 TOM1L2Q6ZVM7 507 aa19.3■□□□□ 0.68
HIF3A-218ENST00000600383 NECTIN2Q92692 538 aa19.3■□□□□ 0.68
HIF3A-218ENST00000600383 CEMIPQ8WUJ3 1361 aa19.29■□□□□ 0.68
HIF3A-218ENST00000600383 CRYBG1Q9Y4K1 1723 aa19.29■□□□□ 0.68
HIF3A-218ENST00000600383 RNMTO43148 476 aaKnown RBP19.29■□□□□ 0.68
HIF3A-218ENST00000600383 STRN4Q9NRL3 753 aa19.28■□□□□ 0.68
HIF3A-218ENST00000600383 BTBD11A6QL63 1104 aa19.28■□□□□ 0.68
HIF3A-218ENST00000600383 EVA1CP58658 441 aa19.28■□□□□ 0.68
HIF3A-218ENST00000600383 BABAM1Q9NWV8 329 aa19.27■□□□□ 0.68
HIF3A-218ENST00000600383 SPG7Q9UQ90 795 aa19.27■□□□□ 0.68
HIF3A-218ENST00000600383 API5Q9BZZ5 524 aaKnown RBP19.27■□□□□ 0.67
HIF3A-218ENST00000600383 RBM19Q9Y4C8 960 aaKnown RBP19.27■□□□□ 0.67
HIF3A-218ENST00000600383 NHSL1Q5SYE7 1610 aa19.26■□□□□ 0.67
HIF3A-218ENST00000600383 LTBP4Q8N2S1 1624 aa19.25■□□□□ 0.67
HIF3A-218ENST00000600383 KCNQ3O43525 872 aa19.25■□□□□ 0.67
HIF3A-218ENST00000600383 LRRC37A3O60309 1634 aa19.25■□□□□ 0.67
HIF3A-218ENST00000600383 WDR17Q8IZU2 1322 aa19.25■□□□□ 0.67
HIF3A-218ENST00000600383 STK31Q9BXU1 1019 aa19.25■□□□□ 0.67
HIF3A-218ENST00000600383 CAMTA1Q9Y6Y1 1673 aa19.25■□□□□ 0.67
HIF3A-218ENST00000600383 PIP4K2BP78356 416 aa19.24■□□□□ 0.67
HIF3A-218ENST00000600383 MEGF6O75095 1541 aa19.24■□□□□ 0.67
HIF3A-218ENST00000600383 ROBO1Q9Y6N7 1651 aa19.24■□□□□ 0.67
HIF3A-218ENST00000600383 CCDC30Q5VVM6 783 aa19.24■□□□□ 0.67
HIF3A-218ENST00000600383 ZBTB40Q9NUA8 1239 aa19.24■□□□□ 0.67
HIF3A-218ENST00000600383 G2E3Q7L622 706 aa19.23■□□□□ 0.67
HIF3A-218ENST00000600383 RWDD1Q9H446 243 aaPredicted RBP19.23■□□□□ 0.67
HIF3A-218ENST00000600383 USP35Q9P2H5 1018 aa19.23■□□□□ 0.67
HIF3A-218ENST00000600383 PHKG2P15735 406 aa19.22■□□□□ 0.67
HIF3A-218ENST00000600383 EIF2S2P20042 333 aaKnown RBP19.22■□□□□ 0.67
HIF3A-218ENST00000600383 EIF4A1P60842 406 aaKnown RBP19.22■□□□□ 0.67
HIF3A-218ENST00000600383 IFNL2Q8IZJ0 200 aa19.22■□□□□ 0.67
HIF3A-218ENST00000600383 LMO7Q8WWI1 1683 aa19.22■□□□□ 0.67
HIF3A-218ENST00000600383 ABCC4O15439 1325 aa19.22■□□□□ 0.67
HIF3A-218ENST00000600383 RGS3P49796 1198 aa19.22■□□□□ 0.67
HIF3A-218ENST00000600383 LARP1Q6PKG0 1096 aaKnown RBP19.22■□□□□ 0.67
HIF3A-218ENST00000600383 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.22■□□□□ 0.67
HIF3A-218ENST00000600383 ABCC6O95255 1503 aa19.21■□□□□ 0.67
HIF3A-218ENST00000600383 ZBTB7BO15156 539 aaPredicted RBP19.21■□□□□ 0.67
HIF3A-218ENST00000600383 BTG4Q9NY30 223 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms