RNA–Protein interactions for RNA: ENST00000599804.5

SMG9-209, Transcript of SMG9, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG9, Length 438 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG9-209ENST00000599804 FAM9BQ8IZU0 186 aa21.95■■□□□ 1.1
SMG9-209ENST00000599804 LRRC37A3O60309 1634 aa21.95■■□□□ 1.1
SMG9-209ENST00000599804 PRKAR2BP31323 418 aa21.94■■□□□ 1.1
SMG9-209ENST00000599804 RGS17Q9UGC6 210 aaPredicted RBP21.94■■□□□ 1.1
SMG9-209ENST00000599804 SHANK3Q9BYB0 1731 aa21.94■■□□□ 1.1
SMG9-209ENST00000599804 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.93■■□□□ 1.1
SMG9-209ENST00000599804 DLG5Q8TDM6 1919 aa21.92■■□□□ 1.1
SMG9-209ENST00000599804 MAPK8IP3Q9UPT6 1336 aa21.92■■□□□ 1.1
SMG9-209ENST00000599804 AMOTQ4VCS5 1084 aa21.92■■□□□ 1.1
SMG9-209ENST00000599804 RUNDC1Q96C34 613 aa21.92■■□□□ 1.1
SMG9-209ENST00000599804 PLEKHF1Q96S99 279 aa21.92■■□□□ 1.1
SMG9-209ENST00000599804 VIRMAQ69YN4 1812 aaKnown RBP21.92■■□□□ 1.1
SMG9-209ENST00000599804 ONECUT3O60422 494 aaPredicted RBP21.91■■□□□ 1.1
SMG9-209ENST00000599804 FAM98CQ17RN3 349 aaKnown RBP21.91■■□□□ 1.1
SMG9-209ENST00000599804 TNS2Q63HR2 1409 aa21.9■■□□□ 1.1
SMG9-209ENST00000599804 RXRBP28702 533 aa21.9■■□□□ 1.1
SMG9-209ENST00000599804 PLEKHO1Q53GL0 409 aaPredicted RBP21.9■■□□□ 1.1
SMG9-209ENST00000599804 SPG7Q9UQ90 795 aa21.89■■□□□ 1.09
SMG9-209ENST00000599804 BRWD3Q6RI45 1802 aa21.88■■□□□ 1.09
SMG9-209ENST00000599804 ZCRB1Q8TBF4 217 aaKnown RBP21.88■■□□□ 1.09
SMG9-209ENST00000599804 EXOC5O00471 708 aa21.87■■□□□ 1.09
SMG9-209ENST00000599804 DDB1Q16531 1140 aa21.87■■□□□ 1.09
SMG9-209ENST00000599804 POTEAQ6S8J7 498 aa21.87■■□□□ 1.09
SMG9-209ENST00000599804 GAS2L2Q8NHY3 880 aa21.87■■□□□ 1.09
SMG9-209ENST00000599804 PCDH11XQ9BZA7 1347 aa21.86■■□□□ 1.09
SMG9-209ENST00000599804 PCDH11YQ9BZA8 1340 aa21.86■■□□□ 1.09
SMG9-209ENST00000599804 CCDC146Q8IYE0 955 aa21.86■■□□□ 1.09
SMG9-209ENST00000599804 A0A0G2JS52 829 aa21.85■■□□□ 1.09
SMG9-209ENST00000599804 MYT1Q01538 1121 aa21.85■■□□□ 1.09
SMG9-209ENST00000599804 PHACTR3Q96KR7 559 aa21.85■■□□□ 1.09
SMG9-209ENST00000599804 MTHFSDQ2M296 383 aaKnown RBP21.83■■□□□ 1.09
SMG9-209ENST00000599804 SEPT12Q8IYM1 358 aa21.83■■□□□ 1.09
SMG9-209ENST00000599804 SCN11AQ9UI33 1791 aa21.83■■□□□ 1.09
SMG9-209ENST00000599804 NFE2L2Q16236 605 aa21.82■■□□□ 1.08
SMG9-209ENST00000599804 C1orf141Q5JVX7 400 aa21.82■■□□□ 1.08
SMG9-209ENST00000599804 ZNF530Q6P9A1 599 aaPredicted RBP21.82■■□□□ 1.08
SMG9-209ENST00000599804 IFNL2Q8IZJ0 200 aa21.82■■□□□ 1.08
SMG9-209ENST00000599804 NCBP3Q53F19 620 aaKnown RBP21.81■■□□□ 1.08
SMG9-209ENST00000599804 AKAP4Q5JQC9 854 aa21.81■■□□□ 1.08
SMG9-209ENST00000599804 NGEFQ8N5V2 710 aa21.81■■□□□ 1.08
SMG9-209ENST00000599804 RGS12O14924 1447 aa21.8■■□□□ 1.08
SMG9-209ENST00000599804 KAT6BQ8WYB5 2073 aa21.8■■□□□ 1.08
SMG9-209ENST00000599804 ADAMTS7Q9UKP4 1686 aa21.8■■□□□ 1.08
SMG9-209ENST00000599804 APAF1O14727 1248 aa21.8■■□□□ 1.08
SMG9-209ENST00000599804 HSP90AB1P08238 724 aaKnown RBP21.8■■□□□ 1.08
SMG9-209ENST00000599804 TMPOP42166 694 aaKnown RBP21.8■■□□□ 1.08
SMG9-209ENST00000599804 PDE3BQ13370 1112 aa21.8■■□□□ 1.08
SMG9-209ENST00000599804 MAP3K5Q99683 1374 aa21.79■■□□□ 1.08
SMG9-209ENST00000599804 PHKG2P15735 406 aa21.79■■□□□ 1.08
SMG9-209ENST00000599804 GNAT3A8MTJ3 354 aa21.78■■□□□ 1.08
SMG9-209ENST00000599804 CYP27B1O15528 508 aa21.78■■□□□ 1.08
SMG9-209ENST00000599804 HTATSF1O43719 755 aaKnown RBP21.78■■□□□ 1.08
SMG9-209ENST00000599804 LMOD3Q0VAK6 560 aa21.78■■□□□ 1.08
SMG9-209ENST00000599804 RIPK4P57078 832 aa21.77■■□□□ 1.08
SMG9-209ENST00000599804 DDX54Q8TDD1 881 aaKnown RBP21.77■■□□□ 1.08
SMG9-209ENST00000599804 SBF2Q86WG5 1849 aa21.76■■□□□ 1.07
SMG9-209ENST00000599804 NKX1-1Q15270 411 aaPredicted RBP21.76■■□□□ 1.07
SMG9-209ENST00000599804 DOT1LQ8TEK3 1739 aa21.75■■□□□ 1.07
SMG9-209ENST00000599804 RTF1Q92541 710 aaKnown RBP21.75■■□□□ 1.07
SMG9-209ENST00000599804 ITGB4P16144 1822 aa21.75■■□□□ 1.07
SMG9-209ENST00000599804 BCL9O00512 1426 aa21.74■■□□□ 1.07
SMG9-209ENST00000599804 CCDC27Q2M243 656 aa21.74■■□□□ 1.07
SMG9-209ENST00000599804 KRT27Q7Z3Y8 459 aa21.74■■□□□ 1.07
SMG9-209ENST00000599804 MARCH10Q8NA82 808 aaPredicted RBP21.74■■□□□ 1.07
SMG9-209ENST00000599804 DCAF5Q96JK2 942 aa21.74■■□□□ 1.07
SMG9-209ENST00000599804 TOGARAM1Q9Y4F4 1720 aa21.74■■□□□ 1.07
SMG9-209ENST00000599804 NEUROD2Q15784 382 aa21.73■■□□□ 1.07
SMG9-209ENST00000599804 SIPA1L3O60292 1781 aaPredicted RBP21.73■■□□□ 1.07
SMG9-209ENST00000599804 RRP7AQ9Y3A4 280 aaKnown RBP21.72■■□□□ 1.07
SMG9-209ENST00000599804 KDM6AO15550 1401 aaPredicted RBP21.71■■□□□ 1.07
SMG9-209ENST00000599804 NHSQ6T4R5 1651 aa21.7■■□□□ 1.06
SMG9-209ENST00000599804 CEMIPQ8WUJ3 1361 aa21.7■■□□□ 1.06
SMG9-209ENST00000599804 MRC1P22897 1456 aa21.7■■□□□ 1.06
SMG9-209ENST00000599804 RNMTO43148 476 aaKnown RBP21.69■■□□□ 1.06
SMG9-209ENST00000599804 HNRNPUQ00839 825 aaKnown RBP eCLIP21.69■■□□□ 1.06
SMG9-209ENST00000599804 MPRIPQ6WCQ1 1025 aa21.69■■□□□ 1.06
SMG9-209ENST00000599804 TRIM35Q9UPQ4 493 aa21.69■■□□□ 1.06
SMG9-209ENST00000599804 ERVV-2B6SEH9 535 aa21.68■■□□□ 1.06
SMG9-209ENST00000599804 CALD1Q05682 793 aaKnown RBP21.68■■□□□ 1.06
SMG9-209ENST00000599804 FAM196AQ6ZSG2 479 aa21.67■■□□□ 1.06
SMG9-209ENST00000599804 WWC1Q8IX03 1113 aa21.66■■□□□ 1.06
SMG9-209ENST00000599804 IL17REQ8NFR9 667 aa21.66■■□□□ 1.06
SMG9-209ENST00000599804 MCM10Q7L590 875 aa21.65■■□□□ 1.06
SMG9-209ENST00000599804 LGR6Q9HBX8 967 aa21.65■■□□□ 1.06
SMG9-209ENST00000599804 TEFQ10587 303 aa21.64■■□□□ 1.05
SMG9-209ENST00000599804 DCTN1Q14203 1278 aa21.64■■□□□ 1.05
SMG9-209ENST00000599804 SALL2Q9Y467 1007 aaPredicted RBP21.64■■□□□ 1.05
SMG9-209ENST00000599804 ZBED9Q6R2W3 1325 aa21.63■■□□□ 1.05
SMG9-209ENST00000599804 CABP4P57796 275 aa21.63■■□□□ 1.05
SMG9-209ENST00000599804 WDR63Q8IWG1 891 aa21.63■■□□□ 1.05
SMG9-209ENST00000599804 SLC52A2Q9HAB3 445 aa21.63■■□□□ 1.05
SMG9-209ENST00000599804 BTAF1O14981 1849 aa21.62■■□□□ 1.05
SMG9-209ENST00000599804 ZNF521Q96K83 1311 aa21.62■■□□□ 1.05
SMG9-209ENST00000599804 KDM3BQ7LBC6 1761 aa21.62■■□□□ 1.05
SMG9-209ENST00000599804 PAPPAQ13219 1627 aa21.62■■□□□ 1.05
SMG9-209ENST00000599804 EP400Q96L91 3159 aa21.61■■□□□ 1.05
SMG9-209ENST00000599804 IL16Q14005 1332 aa21.61■■□□□ 1.05
SMG9-209ENST00000599804 SENP3-EIF4A1A0A087X0R7 540 aa21.61■■□□□ 1.05
SMG9-209ENST00000599804 FAM182BQ5T319 152 aa21.61■■□□□ 1.05
SMG9-209ENST00000599804 TMOD3Q9NYL9 352 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms