RNA–Protein interactions for RNA: ENST00000599662.1

CEACAM3-207, Transcript of carcinoembryonic antigen related cell adhesion molecule 3, humanhuman

TSL 5

Gene CEACAM3, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM3-207ENST00000599662 FLT4P35916 1363 aa28.84■■■□□ 2.21
CEACAM3-207ENST00000599662 HSP90AB2PQ58FF8 381 aa28.83■■■□□ 2.21
CEACAM3-207ENST00000599662 NBPF6Q5VWK0 638 aa28.83■■■□□ 2.21
CEACAM3-207ENST00000599662 NBPF4Q96M43 638 aa28.83■■■□□ 2.21
CEACAM3-207ENST00000599662 SPON1Q9HCB6 807 aa28.83■■■□□ 2.21
CEACAM3-207ENST00000599662 ZCRB1Q8TBF4 217 aaKnown RBP28.81■■■□□ 2.2
CEACAM3-207ENST00000599662 RAPGEF4Q8WZA2 1011 aa28.81■■■□□ 2.2
CEACAM3-207ENST00000599662 INSRP06213 1382 aa28.8■■■□□ 2.2
CEACAM3-207ENST00000599662 CGNL1Q0VF96 1302 aa28.8■■■□□ 2.2
CEACAM3-207ENST00000599662 EMILIN1Q9Y6C2 1016 aa28.8■■■□□ 2.2
CEACAM3-207ENST00000599662 TATP17735 454 aaPredicted RBP28.77■■■□□ 2.2
CEACAM3-207ENST00000599662 PDGFDQ9GZP0 370 aaPredicted RBP28.77■■■□□ 2.2
CEACAM3-207ENST00000599662 ZBTB7AO95365 584 aa28.76■■■□□ 2.19
CEACAM3-207ENST00000599662 TNNT2P45379 298 aaPredicted RBP28.76■■■□□ 2.19
CEACAM3-207ENST00000599662 LY75O60449 1722 aa28.76■■■□□ 2.19
CEACAM3-207ENST00000599662 PAPPAQ13219 1627 aa28.76■■■□□ 2.19
CEACAM3-207ENST00000599662 SLC15A2Q16348 729 aa28.75■■■□□ 2.19
CEACAM3-207ENST00000599662 ITGB4P16144 1822 aa28.75■■■□□ 2.19
CEACAM3-207ENST00000599662 TUBGCP6Q96RT7 1819 aa28.75■■■□□ 2.19
CEACAM3-207ENST00000599662 KIF24Q5T7B8 1368 aa28.75■■■□□ 2.19
CEACAM3-207ENST00000599662 PRIM1P49642 420 aaKnown RBP28.74■■■□□ 2.19
CEACAM3-207ENST00000599662 PKD1L3Q7Z443 1732 aa28.72■■■□□ 2.19
CEACAM3-207ENST00000599662 ATF5Q9Y2D1 282 aaPredicted RBP28.71■■■□□ 2.19
CEACAM3-207ENST00000599662 QSER1Q2KHR3 1735 aa28.69■■■□□ 2.18
CEACAM3-207ENST00000599662 PANK3Q9H999 370 aa28.68■■■□□ 2.18
CEACAM3-207ENST00000599662 TOGARAM1Q9Y4F4 1720 aa28.68■■■□□ 2.18
CEACAM3-207ENST00000599662 PCDH11XQ9BZA7 1347 aa28.68■■■□□ 2.18
CEACAM3-207ENST00000599662 PCDH11YQ9BZA8 1340 aa28.68■■■□□ 2.18
CEACAM3-207ENST00000599662 LRRC4BQ9NT99 713 aa28.67■■■□□ 2.18
CEACAM3-207ENST00000599662 KCNQ4P56696 695 aa28.66■■■□□ 2.18
CEACAM3-207ENST00000599662 ZNF827Q17R98 1081 aa28.64■■■□□ 2.18
CEACAM3-207ENST00000599662 NSD2O96028 1365 aa28.63■■■□□ 2.17
CEACAM3-207ENST00000599662 POLKQ9UBT6 870 aa28.63■■■□□ 2.17
CEACAM3-207ENST00000599662 TAF1LQ8IZX4 1826 aa28.63■■■□□ 2.17
CEACAM3-207ENST00000599662 WASHC2AQ641Q2 1341 aa28.63■■■□□ 2.17
CEACAM3-207ENST00000599662 C5P01031 1676 aa28.62■■■□□ 2.17
CEACAM3-207ENST00000599662 SLC27A3Q5K4L6 730 aa28.62■■■□□ 2.17
CEACAM3-207ENST00000599662 DCAF8L1A6NGE4 600 aa28.6■■■□□ 2.17
CEACAM3-207ENST00000599662 EYA1Q99502 592 aa28.59■■■□□ 2.17
CEACAM3-207ENST00000599662 MTFR1LQ9H019 292 aa28.59■■■□□ 2.17
CEACAM3-207ENST00000599662 CCNL1Q9UK58 526 aaPredicted RBP28.59■■■□□ 2.17
CEACAM3-207ENST00000599662 MPRIPQ6WCQ1 1025 aa28.58■■■□□ 2.17
CEACAM3-207ENST00000599662 CYP27B1O15528 508 aa28.57■■■□□ 2.16
CEACAM3-207ENST00000599662 TFCP2L1Q9NZI6 479 aa28.57■■■□□ 2.16
CEACAM3-207ENST00000599662 SPG7Q9UQ90 795 aa28.57■■■□□ 2.16
CEACAM3-207ENST00000599662 PTGER2P43116 358 aa28.56■■■□□ 2.16
CEACAM3-207ENST00000599662 MORC1Q86VD1 984 aa28.56■■■□□ 2.16
CEACAM3-207ENST00000599662 EIF4A2Q14240 407 aaKnown RBP28.55■■■□□ 2.16
CEACAM3-207ENST00000599662 KNSTRNQ9Y448 316 aa28.55■■■□□ 2.16
CEACAM3-207ENST00000599662 NCAPD2Q15021 1401 aa28.54■■■□□ 2.16
CEACAM3-207ENST00000599662 AKT1S1Q96B36 256 aa28.54■■■□□ 2.16
CEACAM3-207ENST00000599662 MSH5O43196 834 aa28.52■■■□□ 2.16
CEACAM3-207ENST00000599662 KLHL34Q8N239 644 aa28.5■■■□□ 2.15
CEACAM3-207ENST00000599662 PALLDQ8WX93 1383 aa28.5■■■□□ 2.15
CEACAM3-207ENST00000599662 KIF7Q2M1P5 1343 aa28.49■■■□□ 2.15
CEACAM3-207ENST00000599662 PNPLA7Q6ZV29 1317 aa28.49■■■□□ 2.15
CEACAM3-207ENST00000599662 FHDC1Q9C0D6 1143 aaPredicted RBP28.49■■■□□ 2.15
CEACAM3-207ENST00000599662 ARXQ96QS3 562 aa28.47■■■□□ 2.15
CEACAM3-207ENST00000599662 COL24A1Q17RW2 1714 aa28.46■■■□□ 2.15
CEACAM3-207ENST00000599662 VIRMAQ69YN4 1812 aaKnown RBP28.46■■■□□ 2.15
CEACAM3-207ENST00000599662 C4BP0C0L5 1744 aa28.46■■■□□ 2.15
CEACAM3-207ENST00000599662 IFNL2Q8IZJ0 200 aa28.45■■■□□ 2.14
CEACAM3-207ENST00000599662 CHD4Q14839 1912 aa28.44■■■□□ 2.14
CEACAM3-207ENST00000599662 POLD1P28340 1107 aa28.44■■■□□ 2.14
CEACAM3-207ENST00000599662 SGIP1Q9BQI5 828 aa28.44■■■□□ 2.14
CEACAM3-207ENST00000599662 UBR3Q6ZT12 1888 aa28.43■■■□□ 2.14
CEACAM3-207ENST00000599662 CNGB1Q14028 1251 aaPredicted RBP28.43■■■□□ 2.14
CEACAM3-207ENST00000599662 SLC16A10Q8TF71 515 aa28.43■■■□□ 2.14
CEACAM3-207ENST00000599662 SMARCC1Q92922 1105 aaPredicted RBP28.43■■■□□ 2.14
CEACAM3-207ENST00000599662 TMOD3Q9NYL9 352 aa28.43■■■□□ 2.14
CEACAM3-207ENST00000599662 IGSF1Q8N6C5 1336 aa28.43■■■□□ 2.14
CEACAM3-207ENST00000599662 PHKG2P15735 406 aa28.42■■■□□ 2.14
CEACAM3-207ENST00000599662 PIGBQ92521 554 aa28.42■■■□□ 2.14
CEACAM3-207ENST00000599662 SYT17Q9BSW7 474 aa28.42■■■□□ 2.14
CEACAM3-207ENST00000599662 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP28.42■■■□□ 2.14
CEACAM3-207ENST00000599662 YY1P25490 414 aa28.41■■■□□ 2.14
CEACAM3-207ENST00000599662 NKX1-1Q15270 411 aaPredicted RBP28.41■■■□□ 2.14
CEACAM3-207ENST00000599662 AK7Q96M32 723 aa28.38■■■□□ 2.13
CEACAM3-207ENST00000599662 PLEKHO1Q53GL0 409 aaPredicted RBP28.37■■■□□ 2.13
CEACAM3-207ENST00000599662 COL23A1Q86Y22 540 aaPredicted RBP28.37■■■□□ 2.13
CEACAM3-207ENST00000599662 AMER1Q5JTC6 1135 aaPredicted RBP28.36■■■□□ 2.13
CEACAM3-207ENST00000599662 CC2D1BQ5T0F9 858 aaKnown RBP28.36■■■□□ 2.13
CEACAM3-207ENST00000599662 MSL1Q68DK7 614 aa28.36■■■□□ 2.13
CEACAM3-207ENST00000599662 ZNF530Q6P9A1 599 aaPredicted RBP28.36■■■□□ 2.13
CEACAM3-207ENST00000599662 AEBP1Q8IUX7 1158 aa28.36■■■□□ 2.13
CEACAM3-207ENST00000599662 SCN11AQ9UI33 1791 aa28.34■■■□□ 2.13
CEACAM3-207ENST00000599662 PHF14O94880 888 aa28.34■■■□□ 2.13
CEACAM3-207ENST00000599662 HMGB2P26583 209 aaKnown RBP28.34■■■□□ 2.13
CEACAM3-207ENST00000599662 SULT6B1Q6IMI4 303 aa28.34■■■□□ 2.13
CEACAM3-207ENST00000599662 ASAP1Q9ULH1 1129 aa28.34■■■□□ 2.13
CEACAM3-207ENST00000599662 LOC102724428A0A0B4J2F2 783 aa28.32■■■□□ 2.12
CEACAM3-207ENST00000599662 SIK1P57059 783 aa28.32■■■□□ 2.12
CEACAM3-207ENST00000599662 C1orf141Q5JVX7 400 aa28.32■■■□□ 2.12
CEACAM3-207ENST00000599662 PELP1Q8IZL8 1130 aaKnown RBP28.32■■■□□ 2.12
CEACAM3-207ENST00000599662 HSP90AB1P08238 724 aaKnown RBP28.3■■■□□ 2.12
CEACAM3-207ENST00000599662 AMOTQ4VCS5 1084 aa28.3■■■□□ 2.12
CEACAM3-207ENST00000599662 PLEKHG2Q9H7P9 1386 aa28.29■■■□□ 2.12
CEACAM3-207ENST00000599662 ATP6V1AP38606 617 aa28.29■■■□□ 2.12
CEACAM3-207ENST00000599662 MTHFSP49914 203 aa28.29■■■□□ 2.12
CEACAM3-207ENST00000599662 FLAD1Q8NFF5 587 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms