RNA–Protein interactions for RNA: ENST00000599264.1

LINC00343-208, long intergenic non-protein coding RNA 343, humanhuman

TSL 3

Gene LINC00343, Length 807 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-208ENST00000599264 MYCP01106 439 aaPredicted RBP12.71□□□□□ -0.37
LINC00343-208ENST00000599264 SLFNL1Q499Z3 407 aa12.71□□□□□ -0.37
LINC00343-208ENST00000599264 ERBB4Q15303 1308 aa12.7□□□□□ -0.38
LINC00343-208ENST00000599264 VSIG8P0DPA2 414 aa12.7□□□□□ -0.38
LINC00343-208ENST00000599264 VAC14Q08AM6 782 aa12.7□□□□□ -0.38
LINC00343-208ENST00000599264 GPC1P35052 558 aa12.69□□□□□ -0.38
LINC00343-208ENST00000599264 LYSMD3Q7Z3D4 306 aa12.69□□□□□ -0.38
LINC00343-208ENST00000599264 NLRP3Q96P20 1036 aa12.69□□□□□ -0.38
LINC00343-208ENST00000599264 MEN1O00255 615 aa12.68□□□□□ -0.38
LINC00343-208ENST00000599264 SOX11P35716 441 aa12.68□□□□□ -0.38
LINC00343-208ENST00000599264 RNF144AP50876 292 aaPredicted RBP12.68□□□□□ -0.38
LINC00343-208ENST00000599264 FLIIQ13045 1269 aa12.68□□□□□ -0.38
LINC00343-208ENST00000599264 FOXD4L5Q5VV16 416 aaPredicted RBP12.68□□□□□ -0.38
LINC00343-208ENST00000599264 CCDC155Q8N6L0 562 aa12.68□□□□□ -0.38
LINC00343-208ENST00000599264 A0A1W2PRU2 124 aa12.67□□□□□ -0.38
LINC00343-208ENST00000599264 SCTRP47872 440 aa12.67□□□□□ -0.38
LINC00343-208ENST00000599264 RNF135Q8IUD6 432 aa12.67□□□□□ -0.38
LINC00343-208ENST00000599264 SLC35F4A4IF30 521 aa12.66□□□□□ -0.38
LINC00343-208ENST00000599264 RAD21O60216 631 aa12.66□□□□□ -0.38
LINC00343-208ENST00000599264 SEMA3FQ13275 785 aa12.66□□□□□ -0.38
LINC00343-208ENST00000599264 STK17AQ9UEE5 414 aa12.66□□□□□ -0.38
LINC00343-208ENST00000599264 TMEM132AQ24JP5 1023 aa12.65□□□□□ -0.38
LINC00343-208ENST00000599264 OSBPL3Q9H4L5 887 aa12.65□□□□□ -0.38
LINC00343-208ENST00000599264 DOLKQ9UPQ8 538 aa12.65□□□□□ -0.38
LINC00343-208ENST00000599264 COG6Q9Y2V7 657 aa12.65□□□□□ -0.38
LINC00343-208ENST00000599264 TRAK2O60296 914 aa12.64□□□□□ -0.39
LINC00343-208ENST00000599264 GNRH1P01148 92 aa12.64□□□□□ -0.39
LINC00343-208ENST00000599264 USP4Q13107 963 aa12.64□□□□□ -0.39
LINC00343-208ENST00000599264 SIRT1Q96EB6 747 aa12.64□□□□□ -0.39
LINC00343-208ENST00000599264 CCDC85AQ96PX6 553 aaPredicted RBP12.64□□□□□ -0.39
LINC00343-208ENST00000599264 FAM181BA6NEQ2 426 aa12.63□□□□□ -0.39
LINC00343-208ENST00000599264 CLN3Q13286 438 aa12.63□□□□□ -0.39
LINC00343-208ENST00000599264 SLC27A3Q5K4L6 730 aa12.63□□□□□ -0.39
LINC00343-208ENST00000599264 PRICKLE2Q7Z3G6 844 aa12.63□□□□□ -0.39
LINC00343-208ENST00000599264 PHTF2Q8N3S3 785 aa12.62□□□□□ -0.39
LINC00343-208ENST00000599264 ITGA6P23229 1130 aa12.61□□□□□ -0.39
LINC00343-208ENST00000599264 NANOS1Q8WY41 292 aaKnown RBP12.61□□□□□ -0.39
LINC00343-208ENST00000599264 CDCA7Q9BWT1 371 aaPredicted RBP12.61□□□□□ -0.39
LINC00343-208ENST00000599264 ARHGEF10LQ9HCE6 1279 aa12.61□□□□□ -0.39
LINC00343-208ENST00000599264 UBTFP17480 764 aaKnown RBP12.6□□□□□ -0.39
LINC00343-208ENST00000599264 ZSCAN1Q8NBB4 408 aa12.6□□□□□ -0.39
LINC00343-208ENST00000599264 ABCC9O60706 1549 aa12.59□□□□□ -0.39
LINC00343-208ENST00000599264 MAP7D1Q3KQU3 841 aa12.59□□□□□ -0.39
LINC00343-208ENST00000599264 ESCO1Q5FWF5 840 aa12.58□□□□□ -0.4
LINC00343-208ENST00000599264 SV2AQ7L0J3 742 aa12.58□□□□□ -0.4
LINC00343-208ENST00000599264 CDC14CA4D256 554 aa12.57□□□□□ -0.4
LINC00343-208ENST00000599264 RHOQP17081 205 aa12.57□□□□□ -0.4
LINC00343-208ENST00000599264 OXLD1Q5BKU9 147 aa12.57□□□□□ -0.4
LINC00343-208ENST00000599264 ESYT1Q9BSJ8 1104 aa12.57□□□□□ -0.4
LINC00343-208ENST00000599264 SENP3-EIF4A1A0A087X0R7 540 aa12.56□□□□□ -0.4
LINC00343-208ENST00000599264 GTF2E1P29083 439 aaPredicted RBP12.56□□□□□ -0.4
LINC00343-208ENST00000599264 CNKSR1Q969H4 720 aa12.56□□□□□ -0.4
LINC00343-208ENST00000599264 GRIP2Q9C0E4 1043 aa12.56□□□□□ -0.4
LINC00343-208ENST00000599264 CHIC2Q9UKJ5 165 aa12.56□□□□□ -0.4
LINC00343-208ENST00000599264 VWA5B2Q8N398 1253 aa12.55□□□□□ -0.4
LINC00343-208ENST00000599264 RAB6BQ9NRW1 208 aa12.55□□□□□ -0.4
LINC00343-208ENST00000599264 TSGA10IPQ3SY00 556 aa12.54□□□□□ -0.4
LINC00343-208ENST00000599264 POU4F2Q12837 409 aa12.53□□□□□ -0.4
LINC00343-208ENST00000599264 WDR44Q5JSH3 913 aa12.53□□□□□ -0.4
LINC00343-208ENST00000599264 PLPP7Q8NBV4 271 aa12.53□□□□□ -0.4
LINC00343-208ENST00000599264 GMCL1Q96IK5 515 aa12.53□□□□□ -0.4
LINC00343-208ENST00000599264 SPATA31C2B4DYI2 1134 aa12.52□□□□□ -0.41
LINC00343-208ENST00000599264 CENPCQ03188 943 aa12.52□□□□□ -0.41
LINC00343-208ENST00000599264 XAGE2Q96GT9 111 aa12.52□□□□□ -0.41
LINC00343-208ENST00000599264 POM121Q96HA1 1249 aa12.52□□□□□ -0.41
LINC00343-208ENST00000599264 DYRK1BQ9Y463 629 aa12.52□□□□□ -0.41
LINC00343-208ENST00000599264 IL2RAP01589 272 aa12.51□□□□□ -0.41
LINC00343-208ENST00000599264 NBPF10Q6P3W6 841 aaKnown RBP12.51□□□□□ -0.41
LINC00343-208ENST00000599264 TAS1R3Q7RTX0 852 aa12.51□□□□□ -0.41
LINC00343-208ENST00000599264 NBPF15Q8N660 670 aa12.51□□□□□ -0.41
LINC00343-208ENST00000599264 GPR161Q8N6U8 529 aaKnown RBP12.51□□□□□ -0.41
LINC00343-208ENST00000599264 ZSCAN10Q96SZ4 725 aaPredicted RBP12.51□□□□□ -0.41
LINC00343-208ENST00000599264 H7C1W4 665 aa12.5□□□□□ -0.41
LINC00343-208ENST00000599264 WASLO00401 505 aaPredicted RBP12.5□□□□□ -0.41
LINC00343-208ENST00000599264 COL25A1Q9BXS0 654 aaPredicted RBP12.5□□□□□ -0.41
LINC00343-208ENST00000599264 GNASQ5JWF2 1037 aa12.49□□□□□ -0.41
LINC00343-208ENST00000599264 FOXR1Q6PIV2 292 aa12.49□□□□□ -0.41
LINC00343-208ENST00000599264 RIPOR1Q6ZS17 1223 aa12.49□□□□□ -0.41
LINC00343-208ENST00000599264 CNTNAP3BQ96NU0 1288 aa12.49□□□□□ -0.41
LINC00343-208ENST00000599264 CNTNAP3Q9BZ76 1288 aa12.49□□□□□ -0.41
LINC00343-208ENST00000599264 ALG2Q9H553 416 aa12.49□□□□□ -0.41
LINC00343-208ENST00000599264 TIMMDC1Q9NPL8 285 aa12.49□□□□□ -0.41
LINC00343-208ENST00000599264 LZTS3O60299 673 aaPredicted RBP12.48□□□□□ -0.41
LINC00343-208ENST00000599264 TMEM214Q6NUQ4 689 aaKnown RBP12.48□□□□□ -0.41
LINC00343-208ENST00000599264 TRIM22Q8IYM9 498 aa12.47□□□□□ -0.41
LINC00343-208ENST00000599264 NFATC2IPQ8NCF5 419 aa12.47□□□□□ -0.41
LINC00343-208ENST00000599264 GAS2L1Q99501 681 aaPredicted RBP12.47□□□□□ -0.41
LINC00343-208ENST00000599264 SKIP12755 728 aa12.46□□□□□ -0.41
LINC00343-208ENST00000599264 LORP23490 312 aaPredicted RBP12.46□□□□□ -0.41
LINC00343-208ENST00000599264 EML3Q32P44 896 aa12.46□□□□□ -0.41
LINC00343-208ENST00000599264 HRH3Q9Y5N1 445 aa12.46□□□□□ -0.41
LINC00343-208ENST00000599264 ETNK1Q9HBU6 452 aa12.45□□□□□ -0.42
LINC00343-208ENST00000599264 F11P03951 625 aa12.44□□□□□ -0.42
LINC00343-208ENST00000599264 GDF10P55107 478 aa12.43□□□□□ -0.42
LINC00343-208ENST00000599264 KRT76Q01546 638 aa12.43□□□□□ -0.42
LINC00343-208ENST00000599264 TLR1Q15399 786 aa12.43□□□□□ -0.42
LINC00343-208ENST00000599264 FHDC1Q9C0D6 1143 aaPredicted RBP12.43□□□□□ -0.42
LINC00343-208ENST00000599264 CUEDC1Q9NWM3 386 aaPredicted RBP12.43□□□□□ -0.42
LINC00343-208ENST00000599264 PIK3CDO00329 1044 aa12.42□□□□□ -0.42
LINC00343-208ENST00000599264 INHAP05111 366 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms