RNA–Protein interactions for RNA: ENST00000599179.1

LINC00343-207, long intergenic non-protein coding RNA 343, humanhuman

TSL 5

Gene LINC00343, Length 726 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-207ENST00000599179 RIMS1Q86UR5 1692 aaKnown RBP12.02□□□□□ -0.49
LINC00343-207ENST00000599179 PER1O15534 1290 aaPredicted RBP12.01□□□□□ -0.49
LINC00343-207ENST00000599179 LILRB3O75022 631 aa12.01□□□□□ -0.49
LINC00343-207ENST00000599179 ZIC2O95409 532 aaPredicted RBP12.01□□□□□ -0.49
LINC00343-207ENST00000599179 GMPRP36959 345 aa12.01□□□□□ -0.49
LINC00343-207ENST00000599179 FRMPD1Q5SYB0 1578 aa12□□□□□ -0.49
LINC00343-207ENST00000599179 QPCTQ16769 361 aa11.99□□□□□ -0.49
LINC00343-207ENST00000599179 C4orf48Q5BLP8 95 aa11.99□□□□□ -0.49
LINC00343-207ENST00000599179 RSPH6AQ9H0K4 717 aa11.99□□□□□ -0.49
LINC00343-207ENST00000599179 RAPGEF2Q9Y4G8 1499 aa11.99□□□□□ -0.49
LINC00343-207ENST00000599179 NEO1Q92859 1461 aa11.98□□□□□ -0.49
LINC00343-207ENST00000599179 UPP2O95045 317 aa11.98□□□□□ -0.49
LINC00343-207ENST00000599179 ZSCAN1Q8NBB4 408 aa11.98□□□□□ -0.49
LINC00343-207ENST00000599179 MAP4K5Q9Y4K4 846 aa11.98□□□□□ -0.49
LINC00343-207ENST00000599179 ARHGEF40Q8TER5 1519 aa11.97□□□□□ -0.49
LINC00343-207ENST00000599179 CLK2P49760 499 aaKnown RBP11.97□□□□□ -0.49
LINC00343-207ENST00000599179 VEGFBP49765 207 aa11.97□□□□□ -0.49
LINC00343-207ENST00000599179 SH3RF1Q7Z6J0 888 aa11.97□□□□□ -0.49
LINC00343-207ENST00000599179 GPKOWQ92917 476 aaPredicted RBP eCLIP11.97□□□□□ -0.49
LINC00343-207ENST00000599179 ITPKCQ96DU7 683 aa11.97□□□□□ -0.49
LINC00343-207ENST00000599179 C1QTNF2Q9BXJ5 285 aa11.97□□□□□ -0.49
LINC00343-207ENST00000599179 NR3C2P08235 984 aa11.96□□□□□ -0.49
LINC00343-207ENST00000599179 GRM5P41594 1212 aa11.96□□□□□ -0.49
LINC00343-207ENST00000599179 ZFAND3Q9H8U3 227 aa11.96□□□□□ -0.49
LINC00343-207ENST00000599179 YEATS2Q9ULM3 1422 aa11.95□□□□□ -0.5
LINC00343-207ENST00000599179 MLECQ14165 292 aa11.95□□□□□ -0.5
LINC00343-207ENST00000599179 TRMT44Q8IYL2 757 aaKnown RBP11.95□□□□□ -0.5
LINC00343-207ENST00000599179 ATP10BO94823 1461 aa11.95□□□□□ -0.5
LINC00343-207ENST00000599179 GOLGA3Q08378 1498 aa11.95□□□□□ -0.5
LINC00343-207ENST00000599179 POGZQ7Z3K3 1410 aa11.94□□□□□ -0.5
LINC00343-207ENST00000599179 ABCA9Q8IUA7 1624 aa11.94□□□□□ -0.5
LINC00343-207ENST00000599179 MAN1A2O60476 641 aa11.94□□□□□ -0.5
LINC00343-207ENST00000599179 ERBB4Q15303 1308 aa11.93□□□□□ -0.5
LINC00343-207ENST00000599179 VSIG8P0DPA2 414 aa11.93□□□□□ -0.5
LINC00343-207ENST00000599179 VASH1Q7L8A9 365 aaPredicted RBP11.93□□□□□ -0.5
LINC00343-207ENST00000599179 SH3BP5LQ7L8J4 393 aa11.93□□□□□ -0.5
LINC00343-207ENST00000599179 MEIOBQ8N635 442 aa11.93□□□□□ -0.5
LINC00343-207ENST00000599179 FANCAO15360 1455 aa11.93□□□□□ -0.5
LINC00343-207ENST00000599179 DENND4BO75064 1496 aaPredicted RBP11.92□□□□□ -0.5
LINC00343-207ENST00000599179 FSHRP23945 695 aa11.92□□□□□ -0.5
LINC00343-207ENST00000599179 C6orf118Q5T5N4 469 aa11.92□□□□□ -0.5
LINC00343-207ENST00000599179 LINC00528Q8N1L1 170 aa11.92□□□□□ -0.5
LINC00343-207ENST00000599179 SLC24A3Q9HC58 644 aa11.92□□□□□ -0.5
LINC00343-207ENST00000599179 AKNAQ7Z591 1439 aa11.92□□□□□ -0.5
LINC00343-207ENST00000599179 BMP2P12643 396 aa11.91□□□□□ -0.5
LINC00343-207ENST00000599179 RTL5Q5HYW3 569 aaPredicted RBP11.91□□□□□ -0.5
LINC00343-207ENST00000599179 EMILIN1Q9Y6C2 1016 aa11.91□□□□□ -0.5
LINC00343-207ENST00000599179 MAGEB6P1A0A0J9YX57 407 aa11.9□□□□□ -0.5
LINC00343-207ENST00000599179 CEBPAP49715 358 aaPredicted RBP11.9□□□□□ -0.5
LINC00343-207ENST00000599179 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
LINC00343-207ENST00000599179 SOBPA7XYQ1 873 aa11.89□□□□□ -0.51
LINC00343-207ENST00000599179 LORP23490 312 aaPredicted RBP11.88□□□□□ -0.51
LINC00343-207ENST00000599179 CCDC116Q8IYX3 515 aa11.88□□□□□ -0.51
LINC00343-207ENST00000599179 TSEN34Q9BSV6 310 aaKnown RBP11.88□□□□□ -0.51
LINC00343-207ENST00000599179 TTC37Q6PGP7 1564 aa11.88□□□□□ -0.51
LINC00343-207ENST00000599179 SIGLEC1Q9BZZ2 1709 aa11.87□□□□□ -0.51
LINC00343-207ENST00000599179 ZFYVE16Q7Z3T8 1539 aa11.86□□□□□ -0.51
LINC00343-207ENST00000599179 POLR3EQ9NVU0 708 aa11.86□□□□□ -0.51
LINC00343-207ENST00000599179 CDV3Q9UKY7 258 aaKnown RBP11.86□□□□□ -0.51
LINC00343-207ENST00000599179 PDXDC2PQ6P474 469 aa11.85□□□□□ -0.51
LINC00343-207ENST00000599179 CARD14Q9BXL6 1004 aa11.85□□□□□ -0.51
LINC00343-207ENST00000599179 PGPEP1Q9NXJ5 209 aa11.85□□□□□ -0.51
LINC00343-207ENST00000599179 LTBP4Q8N2S1 1624 aa11.85□□□□□ -0.51
LINC00343-207ENST00000599179 PTPRTO14522 1441 aa11.85□□□□□ -0.51
LINC00343-207ENST00000599179 UHRF1BP1Q6BDS2 1440 aa11.85□□□□□ -0.51
LINC00343-207ENST00000599179 SOS2Q07890 1332 aaPredicted RBP11.85□□□□□ -0.51
LINC00343-207ENST00000599179 STRCQ7RTU9 1775 aa11.84□□□□□ -0.51
LINC00343-207ENST00000599179 ERFEQ4G0M1 354 aa11.84□□□□□ -0.51
LINC00343-207ENST00000599179 ZMYM4Q5VZL5 1548 aa11.84□□□□□ -0.51
LINC00343-207ENST00000599179 ZC3H4Q9UPT8 1303 aaKnown RBP11.84□□□□□ -0.51
LINC00343-207ENST00000599179 RICTORQ6R327 1708 aa11.83□□□□□ -0.52
LINC00343-207ENST00000599179 EFCAB5A4FU69 1503 aa11.83□□□□□ -0.52
LINC00343-207ENST00000599179 ARHGEF12Q9NZN5 1544 aa11.83□□□□□ -0.52
LINC00343-207ENST00000599179 FAM9AQ8IZU1 332 aaPredicted RBP11.83□□□□□ -0.52
LINC00343-207ENST00000599179 PREX1Q8TCU6 1659 aa11.83□□□□□ -0.52
LINC00343-207ENST00000599179 FER1L4A9Z1Z3 1794 aa11.82□□□□□ -0.52
LINC00343-207ENST00000599179 PPFIA3O75145 1194 aa11.82□□□□□ -0.52
LINC00343-207ENST00000599179 CTDSPL2Q05D32 466 aa11.82□□□□□ -0.52
LINC00343-207ENST00000599179 SLC10A4Q96EP9 437 aa11.82□□□□□ -0.52
LINC00343-207ENST00000599179 ARHGAP9Q9BRR9 750 aa11.82□□□□□ -0.52
LINC00343-207ENST00000599179 IQSEC2Q5JU85 1478 aa11.82□□□□□ -0.52
LINC00343-207ENST00000599179 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.81□□□□□ -0.52
LINC00343-207ENST00000599179 FKBPLQ9UIM3 349 aa11.81□□□□□ -0.52
LINC00343-207ENST00000599179 DNMT3LQ9UJW3 386 aa11.81□□□□□ -0.52
LINC00343-207ENST00000599179 MAGI2Q86UL8 1455 aa11.81□□□□□ -0.52
LINC00343-207ENST00000599179 CTTNBP2Q8WZ74 1663 aa11.81□□□□□ -0.52
LINC00343-207ENST00000599179 UBAP1LF5GYI3 381 aa11.8□□□□□ -0.52
LINC00343-207ENST00000599179 DHX9Q08211 1270 aaKnown RBP11.8□□□□□ -0.52
LINC00343-207ENST00000599179 SKIV2LQ15477 1246 aaKnown RBP11.8□□□□□ -0.52
LINC00343-207ENST00000599179 TTLL8A6PVC2 850 aa11.79□□□□□ -0.52
LINC00343-207ENST00000599179 PPP1R26Q5T8A7 1209 aaPredicted RBP11.79□□□□□ -0.52
LINC00343-207ENST00000599179 HECW1Q76N89 1606 aa11.78□□□□□ -0.52
LINC00343-207ENST00000599179 SH3D19Q5HYK7 790 aa11.78□□□□□ -0.52
LINC00343-207ENST00000599179 ZBTB33Q86T24 672 aa11.78□□□□□ -0.52
LINC00343-207ENST00000599179 ATP10AO60312 1499 aa11.77□□□□□ -0.52
LINC00343-207ENST00000599179 NUP153P49790 1475 aaKnown RBP11.77□□□□□ -0.52
LINC00343-207ENST00000599179 Q6ZVU0 165 aa11.77□□□□□ -0.53
LINC00343-207ENST00000599179 PNMA1Q8ND90 353 aa11.77□□□□□ -0.53
LINC00343-207ENST00000599179 DDRGK1Q96HY6 314 aa11.77□□□□□ -0.53
LINC00343-207ENST00000599179 KCTD15Q96SI1 283 aaPredicted RBP11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms