RNA–Protein interactions for RNA: ENST00000596860.1

SNRPA-202, Transcript of small nuclear ribonucleoprotein polypeptide A, humanhuman

TSL 2

Gene SNRPA, Length 336 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA-202ENST00000596860 ATRNO75882 1429 aa11.57□□□□□ -0.56
SNRPA-202ENST00000596860 SPATA31A1Q5TZJ5 1347 aa11.57□□□□□ -0.56
SNRPA-202ENST00000596860 SPATA31A5Q5VU36 1347 aa11.57□□□□□ -0.56
SNRPA-202ENST00000596860 SPATA31A7Q8IWB4 1347 aa11.57□□□□□ -0.56
SNRPA-202ENST00000596860 TATP17735 454 aaPredicted RBP11.56□□□□□ -0.56
SNRPA-202ENST00000596860 NFE2L2Q16236 605 aa11.56□□□□□ -0.56
SNRPA-202ENST00000596860 PLEKHO1Q53GL0 409 aaPredicted RBP11.56□□□□□ -0.56
SNRPA-202ENST00000596860 TCP11L2Q8N4U5 519 aa11.56□□□□□ -0.56
SNRPA-202ENST00000596860 C8orf37Q96NL8 207 aa11.56□□□□□ -0.56
SNRPA-202ENST00000596860 ADAMTS7Q9UKP4 1686 aa11.55□□□□□ -0.56
SNRPA-202ENST00000596860 APAF1O14727 1248 aa11.55□□□□□ -0.56
SNRPA-202ENST00000596860 IL2RBP14784 551 aa11.55□□□□□ -0.56
SNRPA-202ENST00000596860 TMPOP42166 694 aaKnown RBP11.55□□□□□ -0.56
SNRPA-202ENST00000596860 RBM6P78332 1123 aaKnown RBP11.55□□□□□ -0.56
SNRPA-202ENST00000596860 PDE3BQ13370 1112 aa11.55□□□□□ -0.56
SNRPA-202ENST00000596860 STRN4Q9NRL3 753 aa11.55□□□□□ -0.56
SNRPA-202ENST00000596860 USP21Q9UK80 565 aa11.55□□□□□ -0.56
SNRPA-202ENST00000596860 AFF2P51816 1311 aa11.55□□□□□ -0.56
SNRPA-202ENST00000596860 ZNF521Q96K83 1311 aa11.55□□□□□ -0.56
SNRPA-202ENST00000596860 MEGF6O75095 1541 aa11.55□□□□□ -0.56
SNRPA-202ENST00000596860 HNRNPUQ00839 825 aaKnown RBP eCLIP11.54□□□□□ -0.56
SNRPA-202ENST00000596860 CALD1Q05682 793 aaKnown RBP11.54□□□□□ -0.56
SNRPA-202ENST00000596860 PHACTR3Q96KR7 559 aa11.54□□□□□ -0.56
SNRPA-202ENST00000596860 TRPC5Q9UL62 973 aaPredicted RBP11.54□□□□□ -0.56
SNRPA-202ENST00000596860 SPG7Q9UQ90 795 aa11.54□□□□□ -0.56
SNRPA-202ENST00000596860 SHANK3Q9BYB0 1731 aa11.54□□□□□ -0.56
SNRPA-202ENST00000596860 VIRMAQ69YN4 1812 aaKnown RBP11.53□□□□□ -0.56
SNRPA-202ENST00000596860 HSP90AB1P08238 724 aaKnown RBP11.53□□□□□ -0.56
SNRPA-202ENST00000596860 WDR63Q8IWG1 891 aa11.53□□□□□ -0.56
SNRPA-202ENST00000596860 CCDC146Q8IYE0 955 aa11.53□□□□□ -0.56
SNRPA-202ENST00000596860 IL16Q14005 1332 aa11.53□□□□□ -0.56
SNRPA-202ENST00000596860 THSD7AQ9UPZ6 1657 aa11.52□□□□□ -0.56
SNRPA-202ENST00000596860 SCN11AQ9UI33 1791 aa11.52□□□□□ -0.57
SNRPA-202ENST00000596860 ONECUT3O60422 494 aaPredicted RBP11.52□□□□□ -0.57
SNRPA-202ENST00000596860 MTHFSDQ2M296 383 aaKnown RBP11.52□□□□□ -0.57
SNRPA-202ENST00000596860 AKAP4Q5JQC9 854 aa11.52□□□□□ -0.57
SNRPA-202ENST00000596860 USHBP1Q8N6Y0 703 aa11.52□□□□□ -0.57
SNRPA-202ENST00000596860 PCDH11XQ9BZA7 1347 aa11.52□□□□□ -0.57
SNRPA-202ENST00000596860 PCDH11YQ9BZA8 1340 aa11.52□□□□□ -0.57
SNRPA-202ENST00000596860 LRRC37A3O60309 1634 aa11.52□□□□□ -0.57
SNRPA-202ENST00000596860 MAP3K5Q99683 1374 aa11.52□□□□□ -0.57
SNRPA-202ENST00000596860 TNS2Q63HR2 1409 aa11.52□□□□□ -0.57
SNRPA-202ENST00000596860 GLI3P10071 1580 aa11.51□□□□□ -0.57
SNRPA-202ENST00000596860 RIPK4P57078 832 aa11.51□□□□□ -0.57
SNRPA-202ENST00000596860 WWC1Q8IX03 1113 aa11.51□□□□□ -0.57
SNRPA-202ENST00000596860 QTRT2Q9H974 415 aaKnown RBP11.51□□□□□ -0.57
SNRPA-202ENST00000596860 BABAM1Q9NWV8 329 aa11.51□□□□□ -0.57
SNRPA-202ENST00000596860 GNAT3A8MTJ3 354 aa11.5□□□□□ -0.57
SNRPA-202ENST00000596860 NKX1-1Q15270 411 aaPredicted RBP11.5□□□□□ -0.57
SNRPA-202ENST00000596860 IFNL2Q8IZJ0 200 aa11.5□□□□□ -0.57
SNRPA-202ENST00000596860 ZCRB1Q8TBF4 217 aaKnown RBP11.5□□□□□ -0.57
SNRPA-202ENST00000596860 GJD4Q96KN9 370 aaPredicted RBP11.5□□□□□ -0.57
SNRPA-202ENST00000596860 TRIM35Q9UPQ4 493 aa11.5□□□□□ -0.57
SNRPA-202ENST00000596860 CEMIPQ8WUJ3 1361 aa11.5□□□□□ -0.57
SNRPA-202ENST00000596860 C1orf141Q5JVX7 400 aa11.49□□□□□ -0.57
SNRPA-202ENST00000596860 ZNF530Q6P9A1 599 aaPredicted RBP11.49□□□□□ -0.57
SNRPA-202ENST00000596860 BCL9O00512 1426 aa11.49□□□□□ -0.57
SNRPA-202ENST00000596860 MRC1P22897 1456 aa11.49□□□□□ -0.57
SNRPA-202ENST00000596860 SIPA1L3O60292 1781 aaPredicted RBP11.49□□□□□ -0.57
SNRPA-202ENST00000596860 E9PSI1 815 aa11.48□□□□□ -0.57
SNRPA-202ENST00000596860 PHKG2P15735 406 aa11.48□□□□□ -0.57
SNRPA-202ENST00000596860 GOLGA2Q08379 1002 aa11.48□□□□□ -0.57
SNRPA-202ENST00000596860 RTF1Q92541 710 aaKnown RBP11.48□□□□□ -0.57
SNRPA-202ENST00000596860 RGS12O14924 1447 aa11.48□□□□□ -0.57
SNRPA-202ENST00000596860 EXOC5O00471 708 aa11.47□□□□□ -0.57
SNRPA-202ENST00000596860 CCDC125Q86Z20 511 aa11.47□□□□□ -0.57
SNRPA-202ENST00000596860 DCAF5Q96JK2 942 aa11.47□□□□□ -0.57
SNRPA-202ENST00000596860 CYP27B1O15528 508 aa11.46□□□□□ -0.57
SNRPA-202ENST00000596860 DDB1Q16531 1140 aa11.46□□□□□ -0.57
SNRPA-202ENST00000596860 TRMT2AQ8IZ69 625 aaKnown RBP11.46□□□□□ -0.57
SNRPA-202ENST00000596860 IFT57Q9NWB7 429 aa11.46□□□□□ -0.57
SNRPA-202ENST00000596860 CCDC9Q9Y3X0 531 aaKnown RBP11.46□□□□□ -0.57
SNRPA-202ENST00000596860 ERVV-2B6SEH9 535 aa11.45□□□□□ -0.58
SNRPA-202ENST00000596860 ZNF853P0CG23 659 aa11.45□□□□□ -0.58
SNRPA-202ENST00000596860 GNAI1P63096 354 aa11.45□□□□□ -0.58
SNRPA-202ENST00000596860 NEUROD2Q15784 382 aa11.45□□□□□ -0.58
SNRPA-202ENST00000596860 CFAP44Q96MT7 982 aa11.45□□□□□ -0.58
SNRPA-202ENST00000596860 MYH16Q9H6N6 1097 aa11.45□□□□□ -0.58
SNRPA-202ENST00000596860 USP35Q9P2H5 1018 aa11.45□□□□□ -0.58
SNRPA-202ENST00000596860 RRP7AQ9Y3A4 280 aaKnown RBP11.45□□□□□ -0.58
SNRPA-202ENST00000596860 KDM3BQ7LBC6 1761 aa11.44□□□□□ -0.58
SNRPA-202ENST00000596860 SOS1Q07889 1333 aaPredicted RBP11.44□□□□□ -0.58
SNRPA-202ENST00000596860 RNMTO43148 476 aaKnown RBP11.44□□□□□ -0.58
SNRPA-202ENST00000596860 CT47B1P0C2W7 299 aaPredicted RBP11.44□□□□□ -0.58
SNRPA-202ENST00000596860 SLFN5Q08AF3 891 aa11.44□□□□□ -0.58
SNRPA-202ENST00000596860 YTHDC1Q96MU7 727 aaKnown RBP11.44□□□□□ -0.58
SNRPA-202ENST00000596860 KDM6AO15550 1401 aaPredicted RBP11.43□□□□□ -0.58
SNRPA-202ENST00000596860 CENPBP07199 599 aaPredicted RBP11.43□□□□□ -0.58
SNRPA-202ENST00000596860 IL17REQ8NFR9 667 aa11.43□□□□□ -0.58
SNRPA-202ENST00000596860 ITGB4P16144 1822 aa11.42□□□□□ -0.58
SNRPA-202ENST00000596860 CHL1O00533 1208 aa11.42□□□□□ -0.58
SNRPA-202ENST00000596860 TAF7Q15545 349 aaPredicted RBP11.42□□□□□ -0.58
SNRPA-202ENST00000596860 FAM98CQ17RN3 349 aaKnown RBP11.42□□□□□ -0.58
SNRPA-202ENST00000596860 TOGARAM1Q9Y4F4 1720 aa11.42□□□□□ -0.58
SNRPA-202ENST00000596860 CACNA1FO60840 1977 aa11.41□□□□□ -0.58
SNRPA-202ENST00000596860 TEFQ10587 303 aa11.41□□□□□ -0.58
SNRPA-202ENST00000596860 DUSP27Q5VZP5 1158 aa11.41□□□□□ -0.58
SNRPA-202ENST00000596860 ZNF428Q96B54 188 aa11.41□□□□□ -0.58
SNRPA-202ENST00000596860 CHMP4AQ9BY43 222 aa11.41□□□□□ -0.58
SNRPA-202ENST00000596860 SLC52A2Q9HAB3 445 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms