RNA–Protein interactions for RNA: ENST00000596403.1

SIPA1L3-207, Transcript of signal induced proliferation associated 1 like 3, humanhuman

TSL 3

Gene SIPA1L3, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIPA1L3-207ENST00000596403 HOXC9P31274 260 aa20.53■□□□□ 0.88
SIPA1L3-207ENST00000596403 CCNL1Q9UK58 526 aaPredicted RBP20.53■□□□□ 0.88
SIPA1L3-207ENST00000596403 LTN1O94822 1766 aa20.52■□□□□ 0.88
SIPA1L3-207ENST00000596403 MSH5O43196 834 aa20.52■□□□□ 0.88
SIPA1L3-207ENST00000596403 KAT6BQ8WYB5 2073 aa20.52■□□□□ 0.87
SIPA1L3-207ENST00000596403 MAP3K19Q56UN5 1328 aa20.52■□□□□ 0.87
SIPA1L3-207ENST00000596403 USP47Q96K76 1375 aa20.51■□□□□ 0.87
SIPA1L3-207ENST00000596403 RAPGEF4Q8WZA2 1011 aa20.51■□□□□ 0.87
SIPA1L3-207ENST00000596403 FLAD1Q8NFF5 587 aa20.5■□□□□ 0.87
SIPA1L3-207ENST00000596403 FAM208AQ9UK61 1670 aaKnown RBP20.5■□□□□ 0.87
SIPA1L3-207ENST00000596403 SMG6Q86US8 1419 aaKnown RBP20.5■□□□□ 0.87
SIPA1L3-207ENST00000596403 RTL1A6NKG5 1358 aa20.49■□□□□ 0.87
SIPA1L3-207ENST00000596403 CHD4Q14839 1912 aa20.49■□□□□ 0.87
SIPA1L3-207ENST00000596403 TATP17735 454 aaPredicted RBP20.46■□□□□ 0.87
SIPA1L3-207ENST00000596403 ST20-MTHFSA0A0A6YYL1 179 aa20.45■□□□□ 0.86
SIPA1L3-207ENST00000596403 KCNQ4P56696 695 aa20.45■□□□□ 0.86
SIPA1L3-207ENST00000596403 TMF1P82094 1093 aa20.43■□□□□ 0.86
SIPA1L3-207ENST00000596403 CDCA8Q53HL2 280 aa20.43■□□□□ 0.86
SIPA1L3-207ENST00000596403 TESK2Q96S53 571 aa20.43■□□□□ 0.86
SIPA1L3-207ENST00000596403 QSER1Q2KHR3 1735 aa20.43■□□□□ 0.86
SIPA1L3-207ENST00000596403 PCDH11XQ9BZA7 1347 aa20.43■□□□□ 0.86
SIPA1L3-207ENST00000596403 PCDH11YQ9BZA8 1340 aa20.43■□□□□ 0.86
SIPA1L3-207ENST00000596403 NLGN2Q8NFZ4 835 aa20.42■□□□□ 0.86
SIPA1L3-207ENST00000596403 CD2APQ9Y5K6 639 aa20.42■□□□□ 0.86
SIPA1L3-207ENST00000596403 NSD2O96028 1365 aa20.42■□□□□ 0.86
SIPA1L3-207ENST00000596403 NBPF6Q5VWK0 638 aa20.41■□□□□ 0.86
SIPA1L3-207ENST00000596403 COL23A1Q86Y22 540 aaPredicted RBP20.41■□□□□ 0.86
SIPA1L3-207ENST00000596403 SMARCC1Q92922 1105 aaPredicted RBP20.41■□□□□ 0.86
SIPA1L3-207ENST00000596403 NBPF4Q96M43 638 aa20.41■□□□□ 0.86
SIPA1L3-207ENST00000596403 MEGF6O75095 1541 aa20.4■□□□□ 0.86
SIPA1L3-207ENST00000596403 RRS1Q15050 365 aaKnown RBP20.4■□□□□ 0.86
SIPA1L3-207ENST00000596403 KIF24Q5T7B8 1368 aa20.4■□□□□ 0.86
SIPA1L3-207ENST00000596403 FYB1O15117 783 aa20.38■□□□□ 0.85
SIPA1L3-207ENST00000596403 FBLN1P23142 703 aa20.38■□□□□ 0.85
SIPA1L3-207ENST00000596403 GGNBP2Q9H3C7 697 aa20.38■□□□□ 0.85
SIPA1L3-207ENST00000596403 UTRNP46939 3433 aa20.38■□□□□ 0.85
SIPA1L3-207ENST00000596403 NSD3Q9BZ95 1437 aa20.37■□□□□ 0.85
SIPA1L3-207ENST00000596403 INSRP06213 1382 aa20.37■□□□□ 0.85
SIPA1L3-207ENST00000596403 AK7Q96M32 723 aa20.37■□□□□ 0.85
SIPA1L3-207ENST00000596403 FLT4P35916 1363 aa20.36■□□□□ 0.85
SIPA1L3-207ENST00000596403 PALLDQ8WX93 1383 aa20.36■□□□□ 0.85
SIPA1L3-207ENST00000596403 YBX3P16989 372 aaKnown RBP eCLIP20.36■□□□□ 0.85
SIPA1L3-207ENST00000596403 MSL1Q68DK7 614 aa20.36■□□□□ 0.85
SIPA1L3-207ENST00000596403 MPRIPQ6WCQ1 1025 aa20.36■□□□□ 0.85
SIPA1L3-207ENST00000596403 USHBP1Q8N6Y0 703 aa20.36■□□□□ 0.85
SIPA1L3-207ENST00000596403 DOT1LQ8TEK3 1739 aa20.36■□□□□ 0.85
SIPA1L3-207ENST00000596403 LY75O60449 1722 aa20.35■□□□□ 0.85
SIPA1L3-207ENST00000596403 COL24A1Q17RW2 1714 aa20.35■□□□□ 0.85
SIPA1L3-207ENST00000596403 GPBP1L1Q9HC44 474 aaPredicted RBP20.34■□□□□ 0.85
SIPA1L3-207ENST00000596403 HSP90AB2PQ58FF8 381 aa20.33■□□□□ 0.85
SIPA1L3-207ENST00000596403 SPG7Q9UQ90 795 aa20.33■□□□□ 0.85
SIPA1L3-207ENST00000596403 ATP10DQ9P241 1426 aa20.29■□□□□ 0.84
SIPA1L3-207ENST00000596403 CYP27B1O15528 508 aa20.29■□□□□ 0.84
SIPA1L3-207ENST00000596403 SSFA2P28290 1259 aa20.29■□□□□ 0.84
SIPA1L3-207ENST00000596403 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.27■□□□□ 0.84
SIPA1L3-207ENST00000596403 TUBGCP6Q96RT7 1819 aa20.26■□□□□ 0.83
SIPA1L3-207ENST00000596403 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.26■□□□□ 0.83
SIPA1L3-207ENST00000596403 PHF14O94880 888 aa20.26■□□□□ 0.83
SIPA1L3-207ENST00000596403 NKX1-1Q15270 411 aaPredicted RBP20.26■□□□□ 0.83
SIPA1L3-207ENST00000596403 TMOD3Q9NYL9 352 aa20.26■□□□□ 0.83
SIPA1L3-207ENST00000596403 SHANK3Q9BYB0 1731 aa20.25■□□□□ 0.83
SIPA1L3-207ENST00000596403 PPM1GO15355 546 aaPredicted RBP20.25■□□□□ 0.83
SIPA1L3-207ENST00000596403 PIGBQ92521 554 aa20.25■□□□□ 0.83
SIPA1L3-207ENST00000596403 LOC102724428A0A0B4J2F2 783 aa20.24■□□□□ 0.83
SIPA1L3-207ENST00000596403 SIK1P57059 783 aa20.24■□□□□ 0.83
SIPA1L3-207ENST00000596403 IFFO2Q5TF58 517 aa20.24■□□□□ 0.83
SIPA1L3-207ENST00000596403 IGSF1Q8N6C5 1336 aa20.24■□□□□ 0.83
SIPA1L3-207ENST00000596403 C5P01031 1676 aa20.23■□□□□ 0.83
SIPA1L3-207ENST00000596403 RGPD2P0DJD1 1756 aa20.22■□□□□ 0.83
SIPA1L3-207ENST00000596403 IFNL2Q8IZJ0 200 aa20.22■□□□□ 0.83
SIPA1L3-207ENST00000596403 EMILIN1Q9Y6C2 1016 aa20.22■□□□□ 0.83
SIPA1L3-207ENST00000596403 WASHC2AQ641Q2 1341 aa20.22■□□□□ 0.83
SIPA1L3-207ENST00000596403 HSPA6P17066 643 aa20.21■□□□□ 0.83
SIPA1L3-207ENST00000596403 GNPATO15228 680 aa20.2■□□□□ 0.82
SIPA1L3-207ENST00000596403 ATP6V1AP38606 617 aa20.2■□□□□ 0.82
SIPA1L3-207ENST00000596403 ADCY9O60503 1353 aa20.2■□□□□ 0.82
SIPA1L3-207ENST00000596403 ZNF526Q8TF50 670 aaPredicted RBP20.19■□□□□ 0.82
SIPA1L3-207ENST00000596403 PLEKHG2Q9H7P9 1386 aa20.19■□□□□ 0.82
SIPA1L3-207ENST00000596403 C4BP0C0L5 1744 aa20.19■□□□□ 0.82
SIPA1L3-207ENST00000596403 NLGN1Q8N2Q7 840 aa20.18■□□□□ 0.82
SIPA1L3-207ENST00000596403 HSP90AB1P08238 724 aaKnown RBP20.17■□□□□ 0.82
SIPA1L3-207ENST00000596403 LINC00116Q8NCU8 138 aa20.17■□□□□ 0.82
SIPA1L3-207ENST00000596403 EYA1Q99502 592 aa20.17■□□□□ 0.82
SIPA1L3-207ENST00000596403 RTCBQ9Y3I0 505 aaKnown RBP20.17■□□□□ 0.82
SIPA1L3-207ENST00000596403 NCAPD2Q15021 1401 aa20.17■□□□□ 0.82
SIPA1L3-207ENST00000596403 PHKG2P15735 406 aa20.16■□□□□ 0.82
SIPA1L3-207ENST00000596403 TGFB2P61812 414 aa20.16■□□□□ 0.82
SIPA1L3-207ENST00000596403 TRAPPC3LQ5T215 181 aa20.16■□□□□ 0.82
SIPA1L3-207ENST00000596403 CARD14Q9BXL6 1004 aa20.16■□□□□ 0.82
SIPA1L3-207ENST00000596403 ASAP1Q9ULH1 1129 aa20.15■□□□□ 0.82
SIPA1L3-207ENST00000596403 MMP10P09238 476 aa20.14■□□□□ 0.81
SIPA1L3-207ENST00000596403 ADRA2BP18089 450 aa20.14■□□□□ 0.81
SIPA1L3-207ENST00000596403 TIMELESSQ9UNS1 1208 aa20.14■□□□□ 0.81
SIPA1L3-207ENST00000596403 KIF20BQ96Q89 1820 aa20.13■□□□□ 0.81
SIPA1L3-207ENST00000596403 ERVV-2B6SEH9 535 aa20.13■□□□□ 0.81
SIPA1L3-207ENST00000596403 AMIGO3Q86WK7 504 aa20.13■□□□□ 0.81
SIPA1L3-207ENST00000596403 WWC3Q9ULE0 1092 aa20.13■□□□□ 0.81
SIPA1L3-207ENST00000596403 TAF1LQ8IZX4 1826 aa20.13■□□□□ 0.81
SIPA1L3-207ENST00000596403 ITPK1Q13572 414 aa20.12■□□□□ 0.81
SIPA1L3-207ENST00000596403 ATG3Q9NT62 314 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms