RNA–Protein interactions for RNA: ENST00000593922.5

IRF3-207, Transcript of interferon regulatory factor 3, humanhuman

TSL 1 (best) BASIC

Gene IRF3, Length 1,494 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-207ENST00000593922 SULT6B1Q6IMI4 303 aa29.53■■■□□ 2.32
IRF3-207ENST00000593922 DDB1Q16531 1140 aa29.52■■■□□ 2.32
IRF3-207ENST00000593922 U2SURPO15042 1029 aaKnown RBP29.51■■■□□ 2.31
IRF3-207ENST00000593922 NUDCQ9Y266 331 aa29.5■■■□□ 2.31
IRF3-207ENST00000593922 TATP17735 454 aaPredicted RBP29.49■■■□□ 2.31
IRF3-207ENST00000593922 YTHDC1Q96MU7 727 aaKnown RBP29.49■■■□□ 2.31
IRF3-207ENST00000593922 HMOX1P09601 288 aa29.48■■■□□ 2.31
IRF3-207ENST00000593922 KRT27Q7Z3Y8 459 aa29.48■■■□□ 2.31
IRF3-207ENST00000593922 SBF2Q86WG5 1849 aa29.47■■■□□ 2.31
IRF3-207ENST00000593922 EXOC5O00471 708 aa29.46■■■□□ 2.31
IRF3-207ENST00000593922 CCDC184Q52MB2 194 aa29.45■■■□□ 2.31
IRF3-207ENST00000593922 U2AF1L5P0DN76 240 aaPredicted RBP29.44■■■□□ 2.3
IRF3-207ENST00000593922 U2AF1Q01081 240 aaKnown RBP eCLIP29.44■■■□□ 2.3
IRF3-207ENST00000593922 PDE3BQ13370 1112 aa29.44■■■□□ 2.3
IRF3-207ENST00000593922 CENPBP07199 599 aaPredicted RBP29.43■■■□□ 2.3
IRF3-207ENST00000593922 ZCRB1Q8TBF4 217 aaKnown RBP29.43■■■□□ 2.3
IRF3-207ENST00000593922 MARCH10Q8NA82 808 aaPredicted RBP29.42■■■□□ 2.3
IRF3-207ENST00000593922 RSPH6AQ9H0K4 717 aa29.42■■■□□ 2.3
IRF3-207ENST00000593922 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP29.42■■■□□ 2.3
IRF3-207ENST00000593922 DOT1LQ8TEK3 1739 aa29.42■■■□□ 2.3
IRF3-207ENST00000593922 VIRMAQ69YN4 1812 aaKnown RBP29.41■■■□□ 2.3
IRF3-207ENST00000593922 BCL9O00512 1426 aa29.41■■■□□ 2.3
IRF3-207ENST00000593922 PCDH11XQ9BZA7 1347 aa29.4■■■□□ 2.3
IRF3-207ENST00000593922 PCDH11YQ9BZA8 1340 aa29.4■■■□□ 2.3
IRF3-207ENST00000593922 TOGARAM1Q9Y4F4 1720 aa29.4■■■□□ 2.3
IRF3-207ENST00000593922 FAM182BQ5T319 152 aa29.4■■■□□ 2.3
IRF3-207ENST00000593922 NHSQ6T4R5 1651 aa29.38■■■□□ 2.29
IRF3-207ENST00000593922 TNS1Q9HBL0 1735 aaKnown RBP29.38■■■□□ 2.29
IRF3-207ENST00000593922 FCHSD2O94868 740 aa29.37■■■□□ 2.29
IRF3-207ENST00000593922 PRKAR2BP31323 418 aa29.37■■■□□ 2.29
IRF3-207ENST00000593922 SPG7Q9UQ90 795 aa29.37■■■□□ 2.29
IRF3-207ENST00000593922 CYP27B1O15528 508 aa29.36■■■□□ 2.29
IRF3-207ENST00000593922 FAM9BQ8IZU0 186 aa29.36■■■□□ 2.29
IRF3-207ENST00000593922 DDX54Q8TDD1 881 aaKnown RBP29.36■■■□□ 2.29
IRF3-207ENST00000593922 AMOTQ4VCS5 1084 aa29.35■■■□□ 2.29
IRF3-207ENST00000593922 PNISRQ8TF01 805 aaKnown RBP29.35■■■□□ 2.29
IRF3-207ENST00000593922 DLG5Q8TDM6 1919 aa29.34■■■□□ 2.29
IRF3-207ENST00000593922 KAT6BQ8WYB5 2073 aa29.34■■■□□ 2.29
IRF3-207ENST00000593922 WDR43Q15061 677 aaKnown RBP eCLIP29.34■■■□□ 2.29
IRF3-207ENST00000593922 PLEKHO1Q53GL0 409 aaPredicted RBP29.34■■■□□ 2.29
IRF3-207ENST00000593922 ADAMTS7Q9UKP4 1686 aa29.33■■■□□ 2.29
IRF3-207ENST00000593922 SCN11AQ9UI33 1791 aa29.33■■■□□ 2.29
IRF3-207ENST00000593922 ITGB4P16144 1822 aa29.33■■■□□ 2.29
IRF3-207ENST00000593922 FAM196AQ6ZSG2 479 aa29.32■■■□□ 2.28
IRF3-207ENST00000593922 PHKG2P15735 406 aa29.3■■■□□ 2.28
IRF3-207ENST00000593922 ZNF530Q6P9A1 599 aaPredicted RBP29.3■■■□□ 2.28
IRF3-207ENST00000593922 PHACTR3Q96KR7 559 aa29.3■■■□□ 2.28
IRF3-207ENST00000593922 PLEKHF1Q96S99 279 aa29.3■■■□□ 2.28
IRF3-207ENST00000593922 ADAMTS8Q9UP79 889 aa29.29■■■□□ 2.28
IRF3-207ENST00000593922 MTHFSDQ2M296 383 aaKnown RBP29.29■■■□□ 2.28
IRF3-207ENST00000593922 IFNL2Q8IZJ0 200 aa29.28■■■□□ 2.28
IRF3-207ENST00000593922 BTAF1O14981 1849 aa29.28■■■□□ 2.28
IRF3-207ENST00000593922 NKX1-1Q15270 411 aaPredicted RBP29.27■■■□□ 2.28
IRF3-207ENST00000593922 KDM6AO15550 1401 aaPredicted RBP29.27■■■□□ 2.28
IRF3-207ENST00000593922 GAS2L2Q8NHY3 880 aa29.24■■■□□ 2.27
IRF3-207ENST00000593922 C1orf141Q5JVX7 400 aa29.23■■■□□ 2.27
IRF3-207ENST00000593922 PNNQ9H307 717 aaKnown RBP29.23■■■□□ 2.27
IRF3-207ENST00000593922 AKAP4Q5JQC9 854 aa29.23■■■□□ 2.27
IRF3-207ENST00000593922 MAP3K5Q99683 1374 aa29.22■■■□□ 2.27
IRF3-207ENST00000593922 RGPD3A6NKT7 1758 aaPredicted RBP29.21■■■□□ 2.27
IRF3-207ENST00000593922 RGPD4Q7Z3J3 1758 aa29.21■■■□□ 2.27
IRF3-207ENST00000593922 MAPK8IP3Q9UPT6 1336 aa29.21■■■□□ 2.27
IRF3-207ENST00000593922 HNRNPUQ00839 825 aaKnown RBP eCLIP29.21■■■□□ 2.272e-8■□□□□ 8.3
IRF3-207ENST00000593922 MRC1P22897 1456 aa29.21■■■□□ 2.27
IRF3-207ENST00000593922 SIPA1L3O60292 1781 aaPredicted RBP29.2■■■□□ 2.27
IRF3-207ENST00000593922 CCDC146Q8IYE0 955 aa29.2■■■□□ 2.26
IRF3-207ENST00000593922 TRIM37O94972 964 aa29.19■■■□□ 2.26
IRF3-207ENST00000593922 HSP90AB1P08238 724 aaKnown RBP29.19■■■□□ 2.26
IRF3-207ENST00000593922 UPF1Q92900 1129 aaKnown RBP eCLIP29.19■■■□□ 2.26
IRF3-207ENST00000593922 ACSBG1Q96GR2 724 aa29.19■■■□□ 2.26
IRF3-207ENST00000593922 NEFMP07197 916 aa29.18■■■□□ 2.26
IRF3-207ENST00000593922 PTF1AQ7RTS3 328 aa29.18■■■□□ 2.26
IRF3-207ENST00000593922 DCAF5Q96JK2 942 aa29.18■■■□□ 2.26
IRF3-207ENST00000593922 KCNQ2O43526 872 aa29.17■■■□□ 2.26
IRF3-207ENST00000593922 RUNDC1Q96C34 613 aa29.17■■■□□ 2.26
IRF3-207ENST00000593922 BCL11BQ9C0K0 894 aaPredicted RBP29.16■■■□□ 2.26
IRF3-207ENST00000593922 NFE2L2Q16236 605 aa29.15■■■□□ 2.26
IRF3-207ENST00000593922 MPRIPQ6WCQ1 1025 aa29.15■■■□□ 2.26
IRF3-207ENST00000593922 GNAT3A8MTJ3 354 aa29.14■■■□□ 2.26
IRF3-207ENST00000593922 PRIM1P49642 420 aaKnown RBP29.13■■■□□ 2.25
IRF3-207ENST00000593922 PAPPAQ13219 1627 aa29.13■■■□□ 2.25
IRF3-207ENST00000593922 CCDC125Q86Z20 511 aa29.12■■■□□ 2.25
IRF3-207ENST00000593922 LY75O60449 1722 aa29.12■■■□□ 2.25
IRF3-207ENST00000593922 CEMIPQ8WUJ3 1361 aa29.12■■■□□ 2.25
IRF3-207ENST00000593922 SOCS7O14512 581 aa29.11■■■□□ 2.25
IRF3-207ENST00000593922 SYTL4Q96C24 671 aaPredicted RBP29.11■■■□□ 2.25
IRF3-207ENST00000593922 RNMTO43148 476 aaKnown RBP29.1■■■□□ 2.25
IRF3-207ENST00000593922 RREB1Q92766 1687 aa29.1■■■□□ 2.25
IRF3-207ENST00000593922 ERVV-2B6SEH9 535 aa29.1■■■□□ 2.25
IRF3-207ENST00000593922 TMPOP42166 694 aaKnown RBP29.1■■■□□ 2.25
IRF3-207ENST00000593922 LGR6Q9HBX8 967 aa29.1■■■□□ 2.25
IRF3-207ENST00000593922 IL17REQ8NFR9 667 aa29.08■■■□□ 2.25
IRF3-207ENST00000593922 HTATSF1O43719 755 aaKnown RBP29.06■■■□□ 2.24
IRF3-207ENST00000593922 TMOD3Q9NYL9 352 aa29.06■■■□□ 2.24
IRF3-207ENST00000593922 ZBED9Q6R2W3 1325 aa29.05■■■□□ 2.24
IRF3-207ENST00000593922 SF3B2Q13435 895 aaKnown RBP29.05■■■□□ 2.24
IRF3-207ENST00000593922 PIGBQ92521 554 aa29.05■■■□□ 2.24
IRF3-207ENST00000593922 RRP7AQ9Y3A4 280 aaKnown RBP29.05■■■□□ 2.24
IRF3-207ENST00000593922 UBR2Q8IWV8 1755 aa29.05■■■□□ 2.24
IRF3-207ENST00000593922 APAF1O14727 1248 aa29.04■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms