RNA–Protein interactions for RNA: ENST00000593361.5

DDX49-202, Transcript of DEAD-box helicase 49, humanhuman

TSL 3

Gene DDX49, Length 557 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX49-202ENST00000593361 TNS2Q63HR2 1409 aa17.25■□□□□ 0.35
DDX49-202ENST00000593361 CDCA7Q9BWT1 371 aaPredicted RBP17.25■□□□□ 0.35
DDX49-202ENST00000593361 BRWD3Q6RI45 1802 aa17.25■□□□□ 0.35
DDX49-202ENST00000593361 TATP17735 454 aaPredicted RBP17.24■□□□□ 0.35
DDX49-202ENST00000593361 RSPH6AQ9H0K4 717 aa17.24■□□□□ 0.35
DDX49-202ENST00000593361 PLEKHG2Q9H7P9 1386 aa17.24■□□□□ 0.35
DDX49-202ENST00000593361 ONECUT3O60422 494 aaPredicted RBP17.22■□□□□ 0.35
DDX49-202ENST00000593361 PRKAR2BP31323 418 aa17.22■□□□□ 0.35
DDX49-202ENST00000593361 SEPT12Q8IYM1 358 aa17.22■□□□□ 0.35
DDX49-202ENST00000593361 PNISRQ8TF01 805 aaKnown RBP17.22■□□□□ 0.35
DDX49-202ENST00000593361 FCHSD2O94868 740 aa17.21■□□□□ 0.35
DDX49-202ENST00000593361 ADAMTS8Q9UP79 889 aa17.21■□□□□ 0.35
DDX49-202ENST00000593361 DDB1Q16531 1140 aa17.2■□□□□ 0.34
DDX49-202ENST00000593361 EXOC5O00471 708 aa17.18■□□□□ 0.34
DDX49-202ENST00000593361 ZCRB1Q8TBF4 217 aaKnown RBP17.18■□□□□ 0.34
DDX49-202ENST00000593361 PCDH11XQ9BZA7 1347 aa17.18■□□□□ 0.34
DDX49-202ENST00000593361 PCDH11YQ9BZA8 1340 aa17.18■□□□□ 0.34
DDX49-202ENST00000593361 PLEKHO1Q53GL0 409 aaPredicted RBP17.17■□□□□ 0.34
DDX49-202ENST00000593361 FAM9BQ8IZU0 186 aa17.17■□□□□ 0.34
DDX49-202ENST00000593361 PLEKHF1Q96S99 279 aa17.17■□□□□ 0.34
DDX49-202ENST00000593361 PNNQ9H307 717 aaKnown RBP17.17■□□□□ 0.34
DDX49-202ENST00000593361 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.17■□□□□ 0.34
DDX49-202ENST00000593361 SPG7Q9UQ90 795 aa17.17■□□□□ 0.34
DDX49-202ENST00000593361 EP400Q96L91 3159 aa17.17■□□□□ 0.34
DDX49-202ENST00000593361 MAPK8IP3Q9UPT6 1336 aa17.17■□□□□ 0.34
DDX49-202ENST00000593361 NEFMP07197 916 aa17.16■□□□□ 0.34
DDX49-202ENST00000593361 AMOTQ4VCS5 1084 aa17.16■□□□□ 0.34
DDX49-202ENST00000593361 CCDC146Q8IYE0 955 aa17.16■□□□□ 0.34
DDX49-202ENST00000593361 PHACTR3Q96KR7 559 aa17.16■□□□□ 0.34
DDX49-202ENST00000593361 DLG5Q8TDM6 1919 aa17.15■□□□□ 0.34
DDX49-202ENST00000593361 VIRMAQ69YN4 1812 aaKnown RBP17.15■□□□□ 0.34
DDX49-202ENST00000593361 PDE3BQ13370 1112 aa17.15■□□□□ 0.34
DDX49-202ENST00000593361 ZNF530Q6P9A1 599 aaPredicted RBP17.15■□□□□ 0.34
DDX49-202ENST00000593361 MTHFSDQ2M296 383 aaKnown RBP17.14■□□□□ 0.33
DDX49-202ENST00000593361 KRT27Q7Z3Y8 459 aa17.14■□□□□ 0.33
DDX49-202ENST00000593361 DDX54Q8TDD1 881 aaKnown RBP17.14■□□□□ 0.33
DDX49-202ENST00000593361 RUNDC1Q96C34 613 aa17.14■□□□□ 0.33
DDX49-202ENST00000593361 CYP27B1O15528 508 aa17.13■□□□□ 0.33
DDX49-202ENST00000593361 GAS2L2Q8NHY3 880 aa17.13■□□□□ 0.33
DDX49-202ENST00000593361 DOT1LQ8TEK3 1739 aa17.13■□□□□ 0.33
DDX49-202ENST00000593361 KAT6BQ8WYB5 2073 aa17.12■□□□□ 0.33
DDX49-202ENST00000593361 MARCH10Q8NA82 808 aaPredicted RBP17.12■□□□□ 0.33
DDX49-202ENST00000593361 TOGARAM1Q9Y4F4 1720 aa17.12■□□□□ 0.33
DDX49-202ENST00000593361 SCN11AQ9UI33 1791 aa17.11■□□□□ 0.33
DDX49-202ENST00000593361 PHKG2P15735 406 aa17.11■□□□□ 0.33
DDX49-202ENST00000593361 C1orf141Q5JVX7 400 aa17.11■□□□□ 0.33
DDX49-202ENST00000593361 IFNL2Q8IZJ0 200 aa17.11■□□□□ 0.33
DDX49-202ENST00000593361 MAP3K5Q99683 1374 aa17.11■□□□□ 0.33
DDX49-202ENST00000593361 SBF2Q86WG5 1849 aa17.1■□□□□ 0.33
DDX49-202ENST00000593361 FAM182BQ5T319 152 aa17.1■□□□□ 0.33
DDX49-202ENST00000593361 YTHDC1Q96MU7 727 aaKnown RBP17.1■□□□□ 0.33
DDX49-202ENST00000593361 NFE2L2Q16236 605 aa17.09■□□□□ 0.33
DDX49-202ENST00000593361 AKAP4Q5JQC9 854 aa17.09■□□□□ 0.33
DDX49-202ENST00000593361 KDM6AO15550 1401 aaPredicted RBP17.09■□□□□ 0.33
DDX49-202ENST00000593361 ADAMTS7Q9UKP4 1686 aa17.09■□□□□ 0.33
DDX49-202ENST00000593361 BCL9O00512 1426 aa17.08■□□□□ 0.32
DDX49-202ENST00000593361 ITGB4P16144 1822 aa17.07■□□□□ 0.32
DDX49-202ENST00000593361 NHSQ6T4R5 1651 aa17.07■□□□□ 0.32
DDX49-202ENST00000593361 APAF1O14727 1248 aa17.07■□□□□ 0.32
DDX49-202ENST00000593361 HSP90AB1P08238 724 aaKnown RBP17.07■□□□□ 0.32
DDX49-202ENST00000593361 TMPOP42166 694 aaKnown RBP17.07■□□□□ 0.32
DDX49-202ENST00000593361 RRP7AQ9Y3A4 280 aaKnown RBP17.07■□□□□ 0.32
DDX49-202ENST00000593361 GNAT3A8MTJ3 354 aa17.06■□□□□ 0.32
DDX49-202ENST00000593361 NKX1-1Q15270 411 aaPredicted RBP17.06■□□□□ 0.32
DDX49-202ENST00000593361 NEUROD2Q15784 382 aa17.05■□□□□ 0.32
DDX49-202ENST00000593361 MPRIPQ6WCQ1 1025 aa17.05■□□□□ 0.32
DDX49-202ENST00000593361 FAM196AQ6ZSG2 479 aa17.05■□□□□ 0.32
DDX49-202ENST00000593361 DCAF5Q96JK2 942 aa17.05■□□□□ 0.32
DDX49-202ENST00000593361 MRC1P22897 1456 aa17.05■□□□□ 0.32
DDX49-202ENST00000593361 SENP3-EIF4A1A0A087X0R7 540 aa17.04■□□□□ 0.32
DDX49-202ENST00000593361 RIPK4P57078 832 aa17.04■□□□□ 0.32
DDX49-202ENST00000593361 RTF1Q92541 710 aaKnown RBP17.04■□□□□ 0.32
DDX49-202ENST00000593361 SIPA1L3O60292 1781 aaPredicted RBP17.03■□□□□ 0.32
DDX49-202ENST00000593361 LMOD3Q0VAK6 560 aa17.03■□□□□ 0.32
DDX49-202ENST00000593361 ILDR2Q71H61 639 aa17.03■□□□□ 0.32
DDX49-202ENST00000593361 ACSBG1Q96GR2 724 aa17.03■□□□□ 0.32
DDX49-202ENST00000593361 TNS1Q9HBL0 1735 aaKnown RBP17.02■□□□□ 0.32
DDX49-202ENST00000593361 RNMTO43148 476 aaKnown RBP17.02■□□□□ 0.32
DDX49-202ENST00000593361 HTATSF1O43719 755 aaKnown RBP17.02■□□□□ 0.32
DDX49-202ENST00000593361 BTAF1O14981 1849 aa17.02■□□□□ 0.31
DDX49-202ENST00000593361 CEMIPQ8WUJ3 1361 aa17.02■□□□□ 0.31
DDX49-202ENST00000593361 DCTN1Q14203 1278 aa17.01■□□□□ 0.31
DDX49-202ENST00000593361 MCM10Q7L590 875 aa17.01■□□□□ 0.31
DDX49-202ENST00000593361 LGR6Q9HBX8 967 aa17.01■□□□□ 0.31
DDX49-202ENST00000593361 IL17REQ8NFR9 667 aa17■□□□□ 0.31
DDX49-202ENST00000593361 SYTL4Q96C24 671 aaPredicted RBP17■□□□□ 0.31
DDX49-202ENST00000593361 TRIM35Q9UPQ4 493 aa17■□□□□ 0.31
DDX49-202ENST00000593361 ERVV-2B6SEH9 535 aa16.99■□□□□ 0.31
DDX49-202ENST00000593361 PRIM1P49642 420 aaKnown RBP16.99■□□□□ 0.31
DDX49-202ENST00000593361 THUMPD2Q9BTF0 503 aaKnown RBP16.99■□□□□ 0.31
DDX49-202ENST00000593361 KCNQ2O43526 872 aa16.98■□□□□ 0.31
DDX49-202ENST00000593361 TRIM37O94972 964 aa16.98■□□□□ 0.31
DDX49-202ENST00000593361 SLC52A2Q9HAB3 445 aa16.98■□□□□ 0.31
DDX49-202ENST00000593361 TMOD3Q9NYL9 352 aa16.98■□□□□ 0.31
DDX49-202ENST00000593361 SALL2Q9Y467 1007 aaPredicted RBP16.98■□□□□ 0.31
DDX49-202ENST00000593361 PAPPAQ13219 1627 aa16.98■□□□□ 0.31
DDX49-202ENST00000593361 CENPBP07199 599 aaPredicted RBP16.97■□□□□ 0.31
DDX49-202ENST00000593361 CABP4P57796 275 aa16.97■□□□□ 0.31
DDX49-202ENST00000593361 TEFQ10587 303 aa16.97■□□□□ 0.31
DDX49-202ENST00000593361 CCDC27Q2M243 656 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms