RNA–Protein interactions for RNA: ENST00000591955.1

NPC1-213, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 561 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-213ENST00000591955 GPAT2Q6NUI2 795 aa8.05□□□□□ -1.12
NPC1-213ENST00000591955 SVOPQ8N4V2 548 aa8.05□□□□□ -1.12
NPC1-213ENST00000591955 C1QTNF2Q9BXJ5 285 aa8.05□□□□□ -1.12
NPC1-213ENST00000591955 TTLL8A6PVC2 850 aa8.04□□□□□ -1.12
NPC1-213ENST00000591955 RSBN1LQ6PCB5 846 aaPredicted RBP8.04□□□□□ -1.12
NPC1-213ENST00000591955 MAP4K5Q9Y4K4 846 aa8.04□□□□□ -1.12
NPC1-213ENST00000591955 CLIP1P30622 1438 aa8.03□□□□□ -1.12
NPC1-213ENST00000591955 ANP32CO43423 234 aa8.03□□□□□ -1.12
NPC1-213ENST00000591955 FSHRP23945 695 aa8.03□□□□□ -1.12
NPC1-213ENST00000591955 IRS1P35568 1242 aa8.03□□□□□ -1.12
NPC1-213ENST00000591955 PLCB2Q00722 1185 aa8.03□□□□□ -1.12
NPC1-213ENST00000591955 WHAMMQ8TF30 809 aa8.03□□□□□ -1.12
NPC1-213ENST00000591955 PPP4R2Q9NY27 417 aa8.03□□□□□ -1.12
NPC1-213ENST00000591955 PCDHB15Q9Y5E8 787 aa8.03□□□□□ -1.12
NPC1-213ENST00000591955 RRBP1Q9P2E9 1410 aaKnown RBP8.03□□□□□ -1.12
NPC1-213ENST00000591955 ANP32AP39687 249 aaKnown RBP8.02□□□□□ -1.13
NPC1-213ENST00000591955 FOXK2Q01167 660 aa8.02□□□□□ -1.13
NPC1-213ENST00000591955 KANK3Q6NY19 840 aa8.02□□□□□ -1.13
NPC1-213ENST00000591955 SH3RF1Q7Z6J0 888 aa8.02□□□□□ -1.13
NPC1-213ENST00000591955 CCDC155Q8N6L0 562 aa8.02□□□□□ -1.13
NPC1-213ENST00000591955 EMILIN1Q9Y6C2 1016 aa8.02□□□□□ -1.13
NPC1-213ENST00000591955 FHAD1B1AJZ9 1412 aa8.02□□□□□ -1.13
NPC1-213ENST00000591955 TRMT44Q8IYL2 757 aaKnown RBP8.01□□□□□ -1.13
NPC1-213ENST00000591955 TBC1D2Q9BYX2 928 aa8.01□□□□□ -1.13
NPC1-213ENST00000591955 COL17A1Q9UMD9 1497 aaPredicted RBP8□□□□□ -1.13
NPC1-213ENST00000591955 CUL7Q14999 1698 aa8□□□□□ -1.13
NPC1-213ENST00000591955 SLC35F4A4IF30 521 aa8□□□□□ -1.13
NPC1-213ENST00000591955 UBTFP17480 764 aaKnown RBP8□□□□□ -1.13
NPC1-213ENST00000591955 BEGAINQ9BUH8 593 aa8□□□□□ -1.13
NPC1-213ENST00000591955 ZBTB3Q9H5J0 574 aa8□□□□□ -1.13
NPC1-213ENST00000591955 BIVM-ERCC5R4GMW8 1640 aa8□□□□□ -1.13
NPC1-213ENST00000591955 FIGNL2A6NMB9 653 aa7.99□□□□□ -1.13
NPC1-213ENST00000591955 PER1O15534 1290 aaPredicted RBP7.99□□□□□ -1.13
NPC1-213ENST00000591955 TTLL12Q14166 644 aaPredicted RBP7.99□□□□□ -1.13
NPC1-213ENST00000591955 DIXDC1Q155Q3 683 aa7.99□□□□□ -1.13
NPC1-213ENST00000591955 AMHR2Q16671 573 aa7.99□□□□□ -1.13
NPC1-213ENST00000591955 GIGYF2Q6Y7W6 1299 aaKnown RBP7.99□□□□□ -1.13
NPC1-213ENST00000591955 VASH1Q7L8A9 365 aaPredicted RBP7.99□□□□□ -1.13
NPC1-213ENST00000591955 CCDC116Q8IYX3 515 aa7.99□□□□□ -1.13
NPC1-213ENST00000591955 RSPH6AQ9H0K4 717 aa7.99□□□□□ -1.13
NPC1-213ENST00000591955 ERICH3Q5RHP9 1530 aa7.98□□□□□ -1.13
NPC1-213ENST00000591955 PPM1GO15355 546 aaPredicted RBP7.98□□□□□ -1.13
NPC1-213ENST00000591955 SPINT1O43278 529 aa7.98□□□□□ -1.13
NPC1-213ENST00000591955 PRPF38BQ5VTL8 546 aaKnown RBP7.98□□□□□ -1.13
NPC1-213ENST00000591955 Q6ZVU0 165 aa7.98□□□□□ -1.13
NPC1-213ENST00000591955 SH3BP5LQ7L8J4 393 aa7.98□□□□□ -1.13
NPC1-213ENST00000591955 ARMC2Q8NEN0 867 aa7.98□□□□□ -1.13
NPC1-213ENST00000591955 BCANQ96GW7 911 aa7.98□□□□□ -1.13
NPC1-213ENST00000591955 EIF5BO60841 1220 aaKnown RBP7.97□□□□□ -1.13
NPC1-213ENST00000591955 ITGA6P23229 1130 aa7.97□□□□□ -1.13
NPC1-213ENST00000591955 MARSP56192 900 aaKnown RBP7.97□□□□□ -1.13
NPC1-213ENST00000591955 VWA5B2Q8N398 1253 aa7.97□□□□□ -1.13
NPC1-213ENST00000591955 SCARF2Q96GP6 870 aaPredicted RBP7.97□□□□□ -1.13
NPC1-213ENST00000591955 KDM2AQ9Y2K7 1162 aa7.97□□□□□ -1.13
NPC1-213ENST00000591955 ABCC2Q92887 1545 aa7.97□□□□□ -1.13
NPC1-213ENST00000591955 TOP2BQ02880 1626 aa7.96□□□□□ -1.13
NPC1-213ENST00000591955 XP32Q5T750 250 aa7.96□□□□□ -1.14
NPC1-213ENST00000591955 SV2AQ7L0J3 742 aa7.96□□□□□ -1.14
NPC1-213ENST00000591955 MAP3K4Q9Y6R4 1608 aa7.96□□□□□ -1.14
NPC1-213ENST00000591955 MAP3K1Q13233 1512 aa7.95□□□□□ -1.14
NPC1-213ENST00000591955 CBLBQ13191 982 aa7.95□□□□□ -1.14
NPC1-213ENST00000591955 NBPF14Q5TI25 921 aa7.95□□□□□ -1.14
NPC1-213ENST00000591955 CABLES1Q8TDN4 633 aa7.95□□□□□ -1.14
NPC1-213ENST00000591955 IPO9Q96P70 1041 aaKnown RBP7.95□□□□□ -1.14
NPC1-213ENST00000591955 GLI2P10070 1586 aa7.94□□□□□ -1.14
NPC1-213ENST00000591955 PPP1R26Q5T8A7 1209 aaPredicted RBP7.94□□□□□ -1.14
NPC1-213ENST00000591955 FBXO41Q8TF61 875 aa7.94□□□□□ -1.14
NPC1-213ENST00000591955 CCDC136Q96JN2 1154 aa7.94□□□□□ -1.14
NPC1-213ENST00000591955 PGPEP1Q9NXJ5 209 aa7.94□□□□□ -1.14
NPC1-213ENST00000591955 WASHC2AQ641Q2 1341 aa7.94□□□□□ -1.14
NPC1-213ENST00000591955 LMTK3Q96Q04 1460 aa7.94□□□□□ -1.14
NPC1-213ENST00000591955 CDC14CA4D256 554 aa7.93□□□□□ -1.14
NPC1-213ENST00000591955 PPP1R15AO75807 674 aaPredicted RBP7.93□□□□□ -1.14
NPC1-213ENST00000591955 ADAMTS2O95450 1211 aa7.93□□□□□ -1.14
NPC1-213ENST00000591955 RIC3Q7Z5B4 369 aa7.93□□□□□ -1.14
NPC1-213ENST00000591955 ASXL2Q76L83 1435 aa7.93□□□□□ -1.14
NPC1-213ENST00000591955 MAGEB6P1A0A0J9YX57 407 aa7.92□□□□□ -1.14
NPC1-213ENST00000591955 LYPD4Q6UWN0 246 aa7.92□□□□□ -1.14
NPC1-213ENST00000591955 BARGINQ6ZT62 677 aa7.92□□□□□ -1.14
NPC1-213ENST00000591955 WASHC2CQ9Y4E1 1318 aa7.92□□□□□ -1.14
NPC1-213ENST00000591955 SLC24A1O60721 1099 aa7.91□□□□□ -1.14
NPC1-213ENST00000591955 CTSOP43234 321 aaPredicted RBP7.91□□□□□ -1.14
NPC1-213ENST00000591955 ERFEQ4G0M1 354 aa7.91□□□□□ -1.14
NPC1-213ENST00000591955 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.91□□□□□ -1.14
NPC1-213ENST00000591955 CCNB3Q8WWL7 1395 aa7.91□□□□□ -1.14
NPC1-213ENST00000591955 SENP3-EIF4A1A0A087X0R7 540 aa7.9□□□□□ -1.14
NPC1-213ENST00000591955 ADAM23O75077 832 aa7.9□□□□□ -1.14
NPC1-213ENST00000591955 SRSF11Q05519 484 aaKnown RBP7.9□□□□□ -1.14
NPC1-213ENST00000591955 DDRGK1Q96HY6 314 aa7.9□□□□□ -1.14
NPC1-213ENST00000591955 ZCCHC11Q5TAX3 1644 aaKnown RBP7.89□□□□□ -1.15
NPC1-213ENST00000591955 EPRSP07814 1512 aaKnown RBP7.89□□□□□ -1.15
NPC1-213ENST00000591955 CSPP1Q1MSJ5 1256 aa7.89□□□□□ -1.15
NPC1-213ENST00000591955 GPKOWQ92917 476 aaPredicted RBP eCLIP7.89□□□□□ -1.15
NPC1-213ENST00000591955 PKNOX2Q96KN3 472 aa7.89□□□□□ -1.15
NPC1-213ENST00000591955 CARD14Q9BXL6 1004 aa7.89□□□□□ -1.15
NPC1-213ENST00000591955 MSTNO14793 375 aa7.88□□□□□ -1.15
NPC1-213ENST00000591955 ZMYND10O75800 440 aa7.88□□□□□ -1.15
NPC1-213ENST00000591955 CELA2BP08218 269 aaPredicted RBP7.88□□□□□ -1.15
NPC1-213ENST00000591955 MAP3K10Q02779 954 aa7.88□□□□□ -1.15
NPC1-213ENST00000591955 QPCTQ16769 361 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 455.1 ms