RNA–Protein interactions for RNA: ENST00000590723.5

NPC1-209, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

TSL 4

Gene NPC1, Length 755 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-209ENST00000590723 RELBQ01201 579 aa12.75□□□□□ -0.37
NPC1-209ENST00000590723 LAMC3Q9Y6N6 1575 aa12.74□□□□□ -0.37
NPC1-209ENST00000590723 SOS2Q07890 1332 aaPredicted RBP12.74□□□□□ -0.37
NPC1-209ENST00000590723 TTLL8A6PVC2 850 aa12.74□□□□□ -0.37
NPC1-209ENST00000590723 THOC2Q8NI27 1593 aaKnown RBP12.73□□□□□ -0.37
NPC1-209ENST00000590723 MYCP01106 439 aaPredicted RBP12.73□□□□□ -0.37
NPC1-209ENST00000590723 RNF135Q8IUD6 432 aa12.73□□□□□ -0.37
NPC1-209ENST00000590723 NPAS3Q8IXF0 933 aa12.73□□□□□ -0.37
NPC1-209ENST00000590723 AGBL1Q96MI9 1066 aa12.73□□□□□ -0.37
NPC1-209ENST00000590723 ATP5J2-PTCD1G3V325 749 aa12.72□□□□□ -0.37
NPC1-209ENST00000590723 PTGIRP43119 386 aa12.72□□□□□ -0.37
NPC1-209ENST00000590723 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.72□□□□□ -0.37
NPC1-209ENST00000590723 CYP2U1Q7Z449 544 aa12.72□□□□□ -0.37
NPC1-209ENST00000590723 SLC16A10Q8TF71 515 aa12.72□□□□□ -0.37
NPC1-209ENST00000590723 NXF1Q9UBU9 619 aaKnown RBP12.72□□□□□ -0.37
NPC1-209ENST00000590723 ERCC6Q03468 1493 aa12.72□□□□□ -0.37
NPC1-209ENST00000590723 ADD1P35611 737 aaKnown RBP12.71□□□□□ -0.37
NPC1-209ENST00000590723 SIRT1Q96EB6 747 aa12.71□□□□□ -0.37
NPC1-209ENST00000590723 POM121Q96HA1 1249 aa12.71□□□□□ -0.37
NPC1-209ENST00000590723 POLMQ9NP87 494 aaPredicted RBP12.7□□□□□ -0.38
NPC1-209ENST00000590723 DOLKQ9UPQ8 538 aa12.7□□□□□ -0.38
NPC1-209ENST00000590723 TERTO14746 1132 aaKnown RBP12.69□□□□□ -0.38
NPC1-209ENST00000590723 ZNF395Q9H8N7 513 aaPredicted RBP12.69□□□□□ -0.38
NPC1-209ENST00000590723 USP4Q13107 963 aa12.68□□□□□ -0.38
NPC1-209ENST00000590723 MAP7D1Q3KQU3 841 aa12.68□□□□□ -0.38
NPC1-209ENST00000590723 RSF1Q96T23 1441 aaPredicted RBP12.68□□□□□ -0.38
NPC1-209ENST00000590723 CUX2O14529 1486 aa12.67□□□□□ -0.38
NPC1-209ENST00000590723 WFS1O76024 890 aa12.67□□□□□ -0.38
NPC1-209ENST00000590723 TREML4Q6UXN2 200 aa12.67□□□□□ -0.38
NPC1-209ENST00000590723 INSM2Q96T92 566 aaPredicted RBP12.67□□□□□ -0.38
NPC1-209ENST00000590723 DNMT3LQ9UJW3 386 aa12.67□□□□□ -0.38
NPC1-209ENST00000590723 PHTF2Q8N3S3 785 aa12.66□□□□□ -0.38
NPC1-209ENST00000590723 CCDC85AQ96PX6 553 aaPredicted RBP12.66□□□□□ -0.38
NPC1-209ENST00000590723 TOP2AP11388 1531 aaKnown RBP12.66□□□□□ -0.38
NPC1-209ENST00000590723 SOBPA7XYQ1 873 aa12.65□□□□□ -0.38
NPC1-209ENST00000590723 CTSOP43234 321 aaPredicted RBP12.64□□□□□ -0.39
NPC1-209ENST00000590723 SCTRP47872 440 aa12.64□□□□□ -0.39
NPC1-209ENST00000590723 NLRP3Q96P20 1036 aa12.64□□□□□ -0.39
NPC1-209ENST00000590723 PRDM2Q13029 1718 aa12.63□□□□□ -0.39
NPC1-209ENST00000590723 FIGNL2A6NMB9 653 aa12.63□□□□□ -0.39
NPC1-209ENST00000590723 TRAK2O60296 914 aa12.63□□□□□ -0.39
NPC1-209ENST00000590723 GNRH1P01148 92 aa12.63□□□□□ -0.39
NPC1-209ENST00000590723 GPC1P35052 558 aa12.63□□□□□ -0.39
NPC1-209ENST00000590723 ALG2Q9H553 416 aa12.63□□□□□ -0.39
NPC1-209ENST00000590723 CHIC2Q9UKJ5 165 aa12.63□□□□□ -0.39
NPC1-209ENST00000590723 NFX1Q12986 1120 aaKnown RBP12.62□□□□□ -0.39
NPC1-209ENST00000590723 PROSER2Q86WR7 435 aaPredicted RBP12.62□□□□□ -0.39
NPC1-209ENST00000590723 KDF1Q8NAX2 398 aaPredicted RBP12.62□□□□□ -0.39
NPC1-209ENST00000590723 PLPP7Q8NBV4 271 aa12.62□□□□□ -0.39
NPC1-209ENST00000590723 OSBPL3Q9H4L5 887 aa12.62□□□□□ -0.39
NPC1-209ENST00000590723 A0A1W2PRU2 124 aa12.61□□□□□ -0.39
NPC1-209ENST00000590723 MEN1O00255 615 aa12.61□□□□□ -0.39
NPC1-209ENST00000590723 OXLD1Q5BKU9 147 aa12.61□□□□□ -0.39
NPC1-209ENST00000590723 RNF217Q8TC41 542 aa12.61□□□□□ -0.39
NPC1-209ENST00000590723 CDCA7Q9BWT1 371 aaPredicted RBP12.61□□□□□ -0.39
NPC1-209ENST00000590723 LZTS3O60299 673 aaPredicted RBP12.6□□□□□ -0.39
NPC1-209ENST00000590723 RNF144AP50876 292 aaPredicted RBP12.6□□□□□ -0.39
NPC1-209ENST00000590723 CLN3Q13286 438 aa12.6□□□□□ -0.39
NPC1-209ENST00000590723 NFATC2IPQ8NCF5 419 aa12.6□□□□□ -0.39
NPC1-209ENST00000590723 IRF7Q92985 503 aa12.6□□□□□ -0.39
NPC1-209ENST00000590723 CLUAP1Q96AJ1 413 aa12.6□□□□□ -0.39
NPC1-209ENST00000590723 A6NJR5 290 aa12.59□□□□□ -0.39
NPC1-209ENST00000590723 ESCO1Q5FWF5 840 aa12.59□□□□□ -0.39
NPC1-209ENST00000590723 LYSMD3Q7Z3D4 306 aa12.59□□□□□ -0.39
NPC1-209ENST00000590723 H3BM21 787 aa12.58□□□□□ -0.4
NPC1-209ENST00000590723 ARHGEF10LQ9HCE6 1279 aa12.58□□□□□ -0.4
NPC1-209ENST00000590723 PTSQ03393 145 aa12.57□□□□□ -0.4
NPC1-209ENST00000590723 SLC27A3Q5K4L6 730 aa12.57□□□□□ -0.4
NPC1-209ENST00000590723 FOXD4L5Q5VV16 416 aaPredicted RBP12.57□□□□□ -0.4
NPC1-209ENST00000590723 CADPSQ9ULU8 1353 aa12.56□□□□□ -0.4
NPC1-209ENST00000590723 SKIP12755 728 aa12.56□□□□□ -0.4
NPC1-209ENST00000590723 EML3Q32P44 896 aa12.56□□□□□ -0.4
NPC1-209ENST00000590723 GTF2E1P29083 439 aaPredicted RBP12.55□□□□□ -0.4
NPC1-209ENST00000590723 TSGA10IPQ3SY00 556 aa12.55□□□□□ -0.4
NPC1-209ENST00000590723 POM121CA8CG34 1229 aa12.54□□□□□ -0.4
NPC1-209ENST00000590723 PPFIA3O75145 1194 aa12.54□□□□□ -0.4
NPC1-209ENST00000590723 HDGFL1Q5TGJ6 251 aa12.54□□□□□ -0.4
NPC1-209ENST00000590723 FNBP4Q8N3X1 1017 aaPredicted RBP12.54□□□□□ -0.4
NPC1-209ENST00000590723 ESYT1Q9BSJ8 1104 aa12.54□□□□□ -0.4
NPC1-209ENST00000590723 PDS5BQ9NTI5 1447 aa12.54□□□□□ -0.4
NPC1-209ENST00000590723 LCE2AQ5TA79 106 aaPredicted RBP12.53□□□□□ -0.4
NPC1-209ENST00000590723 CNKSR1Q969H4 720 aa12.53□□□□□ -0.4
NPC1-209ENST00000590723 WDR62O43379 1518 aa12.52□□□□□ -0.4
NPC1-209ENST00000590723 VEGFBP49765 207 aa12.52□□□□□ -0.41
NPC1-209ENST00000590723 PRICKLE2Q7Z3G6 844 aa12.52□□□□□ -0.41
NPC1-209ENST00000590723 CCDC155Q8N6L0 562 aa12.51□□□□□ -0.41
NPC1-209ENST00000590723 RAB6BQ9NRW1 208 aa12.51□□□□□ -0.41
NPC1-209ENST00000590723 NOD1Q9Y239 953 aa12.51□□□□□ -0.41
NPC1-209ENST00000590723 CFTRP13569 1480 aa12.51□□□□□ -0.41
NPC1-209ENST00000590723 SLC35F4A4IF30 521 aa12.5□□□□□ -0.41
NPC1-209ENST00000590723 PIK3CDO00329 1044 aa12.5□□□□□ -0.41
NPC1-209ENST00000590723 MRC2Q9UBG0 1479 aa12.5□□□□□ -0.41
NPC1-209ENST00000590723 VSIG8P0DPA2 414 aa12.49□□□□□ -0.41
NPC1-209ENST00000590723 WDR44Q5JSH3 913 aa12.49□□□□□ -0.41
NPC1-209ENST00000590723 XAGE2Q96GT9 111 aa12.49□□□□□ -0.41
NPC1-209ENST00000590723 GRIP2Q9C0E4 1043 aa12.49□□□□□ -0.41
NPC1-209ENST00000590723 USP17L5A8MUK1 530 aa12.48□□□□□ -0.41
NPC1-209ENST00000590723 GLMNQ92990 594 aa12.48□□□□□ -0.41
NPC1-209ENST00000590723 FANCD2Q9BXW9 1451 aa12.47□□□□□ -0.41
NPC1-209ENST00000590723 CEP164Q9UPV0 1460 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms