RNA–Protein interactions for RNA: ENST00000590599.1

CTDP1-205, Transcript of CTD phosphatase subunit 1, humanhuman

TSL 2

Gene CTDP1, Length 1,762 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-205ENST00000590599 AXIN2Q9Y2T1 843 aa23.6■■□□□ 1.37
CTDP1-205ENST00000590599 FKBP8Q14318 412 aa23.59■■□□□ 1.37
CTDP1-205ENST00000590599 GLI3P10071 1580 aa23.59■■□□□ 1.37
CTDP1-205ENST00000590599 IL16Q14005 1332 aa23.58■■□□□ 1.37
CTDP1-205ENST00000590599 NWD2Q9ULI1 1742 aa23.58■■□□□ 1.37
CTDP1-205ENST00000590599 NBPF6Q5VWK0 638 aa23.58■■□□□ 1.37
CTDP1-205ENST00000590599 USHBP1Q8N6Y0 703 aa23.58■■□□□ 1.37
CTDP1-205ENST00000590599 NBPF4Q96M43 638 aa23.58■■□□□ 1.37
CTDP1-205ENST00000590599 NRAPQ86VF7 1730 aa23.58■■□□□ 1.37
CTDP1-205ENST00000590599 CAMTA1Q9Y6Y1 1673 aa23.58■■□□□ 1.36
CTDP1-205ENST00000590599 UNC5CLQ8IV45 518 aa23.57■■□□□ 1.36
CTDP1-205ENST00000590599 ERBB3P21860 1342 aa23.57■■□□□ 1.36
CTDP1-205ENST00000590599 CALD1Q05682 793 aaKnown RBP23.57■■□□□ 1.36
CTDP1-205ENST00000590599 CHRNA2Q15822 529 aa23.56■■□□□ 1.36
CTDP1-205ENST00000590599 FAM208AQ9UK61 1670 aaKnown RBP23.56■■□□□ 1.36
CTDP1-205ENST00000590599 COL14A1Q05707 1796 aaKnown RBP23.55■■□□□ 1.36
CTDP1-205ENST00000590599 GAS2L2Q8NHY3 880 aa23.55■■□□□ 1.36
CTDP1-205ENST00000590599 PRDM11Q9NQV5 511 aa23.55■■□□□ 1.36
CTDP1-205ENST00000590599 RNF123Q5XPI4 1314 aa23.54■■□□□ 1.36
CTDP1-205ENST00000590599 NCAPD2Q15021 1401 aa23.54■■□□□ 1.36
CTDP1-205ENST00000590599 GJD4Q96KN9 370 aaPredicted RBP23.54■■□□□ 1.36
CTDP1-205ENST00000590599 BTG4Q9NY30 223 aa23.54■■□□□ 1.36
CTDP1-205ENST00000590599 MTHFSDQ2M296 383 aaKnown RBP23.53■■□□□ 1.36
CTDP1-205ENST00000590599 BRWD3Q6RI45 1802 aa23.53■■□□□ 1.36
CTDP1-205ENST00000590599 LMO7Q8WWI1 1683 aa23.53■■□□□ 1.36
CTDP1-205ENST00000590599 FANCIQ9NVI1 1328 aa23.51■■□□□ 1.35
CTDP1-205ENST00000590599 IRX6P78412 446 aaPredicted RBP23.51■■□□□ 1.35
CTDP1-205ENST00000590599 THUMPD2Q9BTF0 503 aaKnown RBP23.51■■□□□ 1.35
CTDP1-205ENST00000590599 CSB-PGBD3P0DP91 1061 aa23.5■■□□□ 1.35
CTDP1-205ENST00000590599 TSR2Q969E8 191 aaKnown RBP23.5■■□□□ 1.35
CTDP1-205ENST00000590599 CCDC9Q9Y3X0 531 aaKnown RBP23.5■■□□□ 1.35
CTDP1-205ENST00000590599 RRP1P56182 461 aaKnown RBP23.49■■□□□ 1.35
CTDP1-205ENST00000590599 NLRP2Q9NX02 1062 aa23.49■■□□□ 1.35
CTDP1-205ENST00000590599 RTF1Q92541 710 aaKnown RBP23.48■■□□□ 1.35
CTDP1-205ENST00000590599 GNAI1P63096 354 aa23.47■■□□□ 1.35
CTDP1-205ENST00000590599 UPF1Q92900 1129 aaKnown RBP eCLIP23.47■■□□□ 1.356e-6■■■■□ 21.9
CTDP1-205ENST00000590599 IFT57Q9NWB7 429 aa23.47■■□□□ 1.35
CTDP1-205ENST00000590599 DCTN1Q14203 1278 aa23.47■■□□□ 1.35
CTDP1-205ENST00000590599 LAS1LQ9Y4W2 734 aaKnown RBP23.47■■□□□ 1.35
CTDP1-205ENST00000590599 VPS72Q15906 364 aa23.46■■□□□ 1.35
CTDP1-205ENST00000590599 MAP3K5Q99683 1374 aa23.45■■□□□ 1.34
CTDP1-205ENST00000590599 HTATSF1O43719 755 aaKnown RBP23.45■■□□□ 1.34
CTDP1-205ENST00000590599 MCM10Q7L590 875 aa23.45■■□□□ 1.34
CTDP1-205ENST00000590599 COL5A2P05997 1499 aaPredicted RBP23.44■■□□□ 1.34
CTDP1-205ENST00000590599 GNAT3A8MTJ3 354 aa23.44■■□□□ 1.34
CTDP1-205ENST00000590599 PLEKHO1Q53GL0 409 aaPredicted RBP23.43■■□□□ 1.34
CTDP1-205ENST00000590599 CFAP44Q96MT7 982 aa23.43■■□□□ 1.34
CTDP1-205ENST00000590599 STRN4Q9NRL3 753 aa23.43■■□□□ 1.34
CTDP1-205ENST00000590599 CT47B1P0C2W7 299 aaPredicted RBP23.42■■□□□ 1.34
CTDP1-205ENST00000590599 EXOSC9Q06265 439 aaKnown RBP23.42■■□□□ 1.34
CTDP1-205ENST00000590599 AMOTQ4VCS5 1084 aa23.42■■□□□ 1.34
CTDP1-205ENST00000590599 WDR17Q8IZU2 1322 aa23.42■■□□□ 1.34
CTDP1-205ENST00000590599 LRRC37A3O60309 1634 aa23.42■■□□□ 1.34
CTDP1-205ENST00000590599 ZNF853P0CG23 659 aa23.42■■□□□ 1.34
CTDP1-205ENST00000590599 RAPGEF4Q8WZA2 1011 aa23.42■■□□□ 1.34
CTDP1-205ENST00000590599 ERICH6BQ5W0A0 696 aa23.41■■□□□ 1.34
CTDP1-205ENST00000590599 FAM98CQ17RN3 349 aaKnown RBP23.4■■□□□ 1.34
CTDP1-205ENST00000590599 SEPT12Q8IYM1 358 aa23.4■■□□□ 1.34
CTDP1-205ENST00000590599 GOLGA6L2Q8N9W4 650 aaPredicted RBP23.4■■□□□ 1.34
CTDP1-205ENST00000590599 MBIPQ9NS73 344 aa23.4■■□□□ 1.34
CTDP1-205ENST00000590599 ZNF530Q6P9A1 599 aaPredicted RBP23.39■■□□□ 1.33
CTDP1-205ENST00000590599 CRB1P82279 1406 aa23.39■■□□□ 1.33
CTDP1-205ENST00000590599 TATP17735 454 aaPredicted RBP23.38■■□□□ 1.33
CTDP1-205ENST00000590599 TOM1L2Q6ZVM7 507 aa23.38■■□□□ 1.33
CTDP1-205ENST00000590599 PLEKHG2Q9H7P9 1386 aa23.38■■□□□ 1.33
CTDP1-205ENST00000590599 USP35Q9P2H5 1018 aa23.37■■□□□ 1.33
CTDP1-205ENST00000590599 MEGF6O75095 1541 aa23.37■■□□□ 1.33
CTDP1-205ENST00000590599 EVA1CP58658 441 aa23.37■■□□□ 1.33
CTDP1-205ENST00000590599 SPATA31A5Q5VU36 1347 aa23.36■■□□□ 1.33
CTDP1-205ENST00000590599 SPATA31A7Q8IWB4 1347 aa23.36■■□□□ 1.33
CTDP1-205ENST00000590599 A0A0G2JS52 829 aa23.36■■□□□ 1.33
CTDP1-205ENST00000590599 PLIN1O60240 522 aa23.36■■□□□ 1.33
CTDP1-205ENST00000590599 RARSP54136 660 aaKnown RBP23.36■■□□□ 1.33
CTDP1-205ENST00000590599 MYT1Q01538 1121 aa23.36■■□□□ 1.33
CTDP1-205ENST00000590599 AKAP4Q5JQC9 854 aa23.36■■□□□ 1.33
CTDP1-205ENST00000590599 C1orf141Q5JVX7 400 aa23.36■■□□□ 1.33
CTDP1-205ENST00000590599 BCAR3O75815 825 aa23.35■■□□□ 1.33
CTDP1-205ENST00000590599 LARP1Q6PKG0 1096 aaKnown RBP23.35■■□□□ 1.33
CTDP1-205ENST00000590599 PARP4Q9UKK3 1724 aaKnown RBP23.35■■□□□ 1.33
CTDP1-205ENST00000590599 CHL1O00533 1208 aa23.34■■□□□ 1.33
CTDP1-205ENST00000590599 ONECUT3O60422 494 aaPredicted RBP23.33■■□□□ 1.33
CTDP1-205ENST00000590599 FAM182BQ5T319 152 aa23.33■■□□□ 1.33
CTDP1-205ENST00000590599 IL17REQ8NFR9 667 aa23.33■■□□□ 1.33
CTDP1-205ENST00000590599 SPG7Q9UQ90 795 aa23.33■■□□□ 1.33
CTDP1-205ENST00000590599 PKD1L3Q7Z443 1732 aa23.33■■□□□ 1.33
CTDP1-205ENST00000590599 CARD10Q9BWT7 1032 aa23.32■■□□□ 1.32
CTDP1-205ENST00000590599 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP23.32■■□□□ 1.32
CTDP1-205ENST00000590599 SPATA31A1Q5TZJ5 1347 aa23.32■■□□□ 1.32
CTDP1-205ENST00000590599 VIRMAQ69YN4 1812 aaKnown RBP23.32■■□□□ 1.32
CTDP1-205ENST00000590599 CEMIPQ8WUJ3 1361 aa23.31■■□□□ 1.32
CTDP1-205ENST00000590599 CANXP27824 592 aaKnown RBP23.31■■□□□ 1.32
CTDP1-205ENST00000590599 THSD7AQ9UPZ6 1657 aa23.31■■□□□ 1.32
CTDP1-205ENST00000590599 ZNF428Q96B54 188 aa23.3■■□□□ 1.32
CTDP1-205ENST00000590599 TSPYL4Q9UJ04 414 aa23.3■■□□□ 1.32
CTDP1-205ENST00000590599 OVOS2A0A0G2JMS6 1433 aa23.3■■□□□ 1.32
CTDP1-205ENST00000590599 BCL2L13Q9BXK5 485 aa23.29■■□□□ 1.32
CTDP1-205ENST00000590599 SMC4Q9NTJ3 1288 aa23.29■■□□□ 1.32
CTDP1-205ENST00000590599 MPRIPQ6WCQ1 1025 aa23.28■■□□□ 1.32
CTDP1-205ENST00000590599 TAF7Q15545 349 aaPredicted RBP23.27■■□□□ 1.32
CTDP1-205ENST00000590599 TWISTNBQ3B726 338 aaPredicted RBP23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms