RNA–Protein interactions for RNA: ENST00000590436.5

TCF3-213, Transcript of transcription factor 3, humanhuman

TSL 5

Gene TCF3, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-213ENST00000590436 RBM6P78332 1123 aaKnown RBP26.42■■□□□ 1.82
TCF3-213ENST00000590436 FAM98CQ17RN3 349 aaKnown RBP26.42■■□□□ 1.82
TCF3-213ENST00000590436 MAPK8IP3Q9UPT6 1336 aa26.41■■□□□ 1.82
TCF3-213ENST00000590436 RUNDC1Q96C34 613 aa26.41■■□□□ 1.82
TCF3-213ENST00000590436 PKD1L3Q7Z443 1732 aa26.4■■□□□ 1.82
TCF3-213ENST00000590436 PLEKHF1Q96S99 279 aa26.4■■□□□ 1.82
TCF3-213ENST00000590436 THSD7AQ9UPZ6 1657 aa26.4■■□□□ 1.82
TCF3-213ENST00000590436 AMOTQ4VCS5 1084 aa26.39■■□□□ 1.82
TCF3-213ENST00000590436 CCDC146Q8IYE0 955 aa26.39■■□□□ 1.82
TCF3-213ENST00000590436 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP26.39■■□□□ 1.82
TCF3-213ENST00000590436 PLEKHO1Q53GL0 409 aaPredicted RBP26.38■■□□□ 1.81
TCF3-213ENST00000590436 LRRC37A3O60309 1634 aa26.37■■□□□ 1.81
TCF3-213ENST00000590436 A0A0G2JS52 829 aa26.37■■□□□ 1.81
TCF3-213ENST00000590436 RXRBP28702 533 aa26.37■■□□□ 1.81
TCF3-213ENST00000590436 MYT1Q01538 1121 aa26.37■■□□□ 1.81
TCF3-213ENST00000590436 SPG7Q9UQ90 795 aa26.37■■□□□ 1.81
TCF3-213ENST00000590436 POTEAQ6S8J7 498 aa26.36■■□□□ 1.81
TCF3-213ENST00000590436 PHACTR3Q96KR7 559 aa26.36■■□□□ 1.81
TCF3-213ENST00000590436 TNS2Q63HR2 1409 aa26.36■■□□□ 1.81
TCF3-213ENST00000590436 ONECUT3O60422 494 aaPredicted RBP26.35■■□□□ 1.81
TCF3-213ENST00000590436 ZCRB1Q8TBF4 217 aaKnown RBP26.35■■□□□ 1.81
TCF3-213ENST00000590436 EXOC5O00471 708 aa26.34■■□□□ 1.81
TCF3-213ENST00000590436 DDB1Q16531 1140 aa26.34■■□□□ 1.81
TCF3-213ENST00000590436 GAS2L2Q8NHY3 880 aa26.34■■□□□ 1.81
TCF3-213ENST00000590436 SHANK3Q9BYB0 1731 aa26.32■■□□□ 1.8
TCF3-213ENST00000590436 PCDH11XQ9BZA7 1347 aa26.32■■□□□ 1.8
TCF3-213ENST00000590436 PCDH11YQ9BZA8 1340 aa26.32■■□□□ 1.8
TCF3-213ENST00000590436 MTHFSDQ2M296 383 aaKnown RBP26.31■■□□□ 1.8
TCF3-213ENST00000590436 ZNF530Q6P9A1 599 aaPredicted RBP26.31■■□□□ 1.8
TCF3-213ENST00000590436 SEPT12Q8IYM1 358 aa26.31■■□□□ 1.8
TCF3-213ENST00000590436 NFE2L2Q16236 605 aa26.3■■□□□ 1.8
TCF3-213ENST00000590436 APAF1O14727 1248 aa26.29■■□□□ 1.8
TCF3-213ENST00000590436 C1orf141Q5JVX7 400 aa26.29■■□□□ 1.8
TCF3-213ENST00000590436 TMPOP42166 694 aaKnown RBP26.27■■□□□ 1.8
TCF3-213ENST00000590436 DLG5Q8TDM6 1919 aa26.27■■□□□ 1.8
TCF3-213ENST00000590436 PDE3BQ13370 1112 aa26.26■■□□□ 1.79
TCF3-213ENST00000590436 IFNL2Q8IZJ0 200 aa26.26■■□□□ 1.79
TCF3-213ENST00000590436 DDX54Q8TDD1 881 aaKnown RBP26.26■■□□□ 1.79
TCF3-213ENST00000590436 RGS12O14924 1447 aa26.25■■□□□ 1.79
TCF3-213ENST00000590436 MAP3K5Q99683 1374 aa26.25■■□□□ 1.79
TCF3-213ENST00000590436 CYP27B1O15528 508 aa26.25■■□□□ 1.79
TCF3-213ENST00000590436 AKAP4Q5JQC9 854 aa26.25■■□□□ 1.79
TCF3-213ENST00000590436 BRWD3Q6RI45 1802 aa26.24■■□□□ 1.79
TCF3-213ENST00000590436 PHKG2P15735 406 aa26.24■■□□□ 1.79
TCF3-213ENST00000590436 NGEFQ8N5V2 710 aa26.24■■□□□ 1.79
TCF3-213ENST00000590436 RRP7AQ9Y3A4 280 aaKnown RBP26.24■■□□□ 1.79
TCF3-213ENST00000590436 GNAT3A8MTJ3 354 aa26.23■■□□□ 1.79
TCF3-213ENST00000590436 HSP90AB1P08238 724 aaKnown RBP26.23■■□□□ 1.79
TCF3-213ENST00000590436 RIPK4P57078 832 aa26.23■■□□□ 1.79
TCF3-213ENST00000590436 LMOD3Q0VAK6 560 aa26.23■■□□□ 1.79
TCF3-213ENST00000590436 NEUROD2Q15784 382 aa26.22■■□□□ 1.79
TCF3-213ENST00000590436 NCBP3Q53F19 620 aaKnown RBP26.21■■□□□ 1.79
TCF3-213ENST00000590436 RTF1Q92541 710 aaKnown RBP26.21■■□□□ 1.79
TCF3-213ENST00000590436 HTATSF1O43719 755 aaKnown RBP26.2■■□□□ 1.78
TCF3-213ENST00000590436 MARCH10Q8NA82 808 aaPredicted RBP26.2■■□□□ 1.78
TCF3-213ENST00000590436 KRT27Q7Z3Y8 459 aa26.19■■□□□ 1.78
TCF3-213ENST00000590436 HNRNPUQ00839 825 aaKnown RBP eCLIP26.18■■□□□ 1.78
TCF3-213ENST00000590436 NKX1-1Q15270 411 aaPredicted RBP26.18■■□□□ 1.78
TCF3-213ENST00000590436 DCAF5Q96JK2 942 aa26.18■■□□□ 1.78
TCF3-213ENST00000590436 VIRMAQ69YN4 1812 aaKnown RBP26.18■■□□□ 1.78
TCF3-213ENST00000590436 SCN11AQ9UI33 1791 aa26.18■■□□□ 1.78
TCF3-213ENST00000590436 SENP3-EIF4A1A0A087X0R7 540 aa26.17■■□□□ 1.78
TCF3-213ENST00000590436 ADAMTS7Q9UKP4 1686 aa26.17■■□□□ 1.78
TCF3-213ENST00000590436 CCDC27Q2M243 656 aa26.16■■□□□ 1.78
TCF3-213ENST00000590436 MPRIPQ6WCQ1 1025 aa26.16■■□□□ 1.78
TCF3-213ENST00000590436 KDM6AO15550 1401 aaPredicted RBP26.15■■□□□ 1.78
TCF3-213ENST00000590436 TRIM35Q9UPQ4 493 aa26.14■■□□□ 1.78
TCF3-213ENST00000590436 SALL2Q9Y467 1007 aaPredicted RBP26.14■■□□□ 1.78
TCF3-213ENST00000590436 RNMTO43148 476 aaKnown RBP26.13■■□□□ 1.77
TCF3-213ENST00000590436 BCL9O00512 1426 aa26.13■■□□□ 1.77
TCF3-213ENST00000590436 DOT1LQ8TEK3 1739 aa26.12■■□□□ 1.77
TCF3-213ENST00000590436 TOGARAM1Q9Y4F4 1720 aa26.12■■□□□ 1.77
TCF3-213ENST00000590436 MCM10Q7L590 875 aa26.12■■□□□ 1.77
TCF3-213ENST00000590436 IL17REQ8NFR9 667 aa26.12■■□□□ 1.77
TCF3-213ENST00000590436 CEMIPQ8WUJ3 1361 aa26.11■■□□□ 1.77
TCF3-213ENST00000590436 DCTN1Q14203 1278 aa26.11■■□□□ 1.77
TCF3-213ENST00000590436 WWC1Q8IX03 1113 aa26.11■■□□□ 1.77
TCF3-213ENST00000590436 CALD1Q05682 793 aaKnown RBP26.1■■□□□ 1.77
TCF3-213ENST00000590436 LGR6Q9HBX8 967 aa26.1■■□□□ 1.77
TCF3-213ENST00000590436 KAT6BQ8WYB5 2073 aa26.1■■□□□ 1.77
TCF3-213ENST00000590436 ERVV-2B6SEH9 535 aa26.09■■□□□ 1.77
TCF3-213ENST00000590436 TEFQ10587 303 aa26.09■■□□□ 1.77
TCF3-213ENST00000590436 FAM196AQ6ZSG2 479 aa26.09■■□□□ 1.77
TCF3-213ENST00000590436 MRC1P22897 1456 aa26.09■■□□□ 1.77
TCF3-213ENST00000590436 FAM182BQ5T319 152 aa26.08■■□□□ 1.77
TCF3-213ENST00000590436 THUMPD2Q9BTF0 503 aaKnown RBP26.08■■□□□ 1.77
TCF3-213ENST00000590436 ITGB4P16144 1822 aa26.07■■□□□ 1.76
TCF3-213ENST00000590436 CABP4P57796 275 aa26.06■■□□□ 1.76
TCF3-213ENST00000590436 YTHDC1Q96MU7 727 aaKnown RBP26.06■■□□□ 1.76
TCF3-213ENST00000590436 SBF2Q86WG5 1849 aa26.06■■□□□ 1.76
TCF3-213ENST00000590436 ZBED9Q6R2W3 1325 aa26.06■■□□□ 1.76
TCF3-213ENST00000590436 NHSQ6T4R5 1651 aa26.06■■□□□ 1.76
TCF3-213ENST00000590436 SIPA1L3O60292 1781 aaPredicted RBP26.05■■□□□ 1.76
TCF3-213ENST00000590436 WDR63Q8IWG1 891 aa26.05■■□□□ 1.76
TCF3-213ENST00000590436 SLC52A2Q9HAB3 445 aa26.05■■□□□ 1.76
TCF3-213ENST00000590436 TMOD3Q9NYL9 352 aa26.04■■□□□ 1.76
TCF3-213ENST00000590436 ZNF521Q96K83 1311 aa26.04■■□□□ 1.76
TCF3-213ENST00000590436 SYTL4Q96C24 671 aaPredicted RBP26.03■■□□□ 1.76
TCF3-213ENST00000590436 ACSBG1Q96GR2 724 aa26.03■■□□□ 1.76
TCF3-213ENST00000590436 IL16Q14005 1332 aa26.03■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms