RNA–Protein interactions for RNA: ENST00000590187.2

NCAN-204, Transcript of neurocan, humanhuman

TSL 1 (best)

Gene NCAN, Length 2,361 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCAN-204ENST00000590187 PDE3BQ13370 1112 aa20.83■□□□□ 0.93
NCAN-204ENST00000590187 PARP4Q9UKK3 1724 aaKnown RBP20.82■□□□□ 0.92
NCAN-204ENST00000590187 IRX6P78412 446 aaPredicted RBP20.82■□□□□ 0.92
NCAN-204ENST00000590187 FAM182BQ5T319 152 aa20.81■□□□□ 0.92
NCAN-204ENST00000590187 RSPH6AQ9H0K4 717 aa20.81■□□□□ 0.92
NCAN-204ENST00000590187 LRRC37A3O60309 1634 aa20.8■□□□□ 0.92
NCAN-204ENST00000590187 GLIPR1L2Q4G1C9 344 aa20.8■□□□□ 0.92
NCAN-204ENST00000590187 CDCA7Q9BWT1 371 aaPredicted RBP20.8■□□□□ 0.92
NCAN-204ENST00000590187 DDB1Q16531 1140 aa20.8■□□□□ 0.92
NCAN-204ENST00000590187 UPF1Q92900 1129 aaKnown RBP eCLIP20.8■□□□□ 0.92
NCAN-204ENST00000590187 USHBP1Q8N6Y0 703 aa20.79■□□□□ 0.92
NCAN-204ENST00000590187 ZBTB47Q9UFB7 747 aaPredicted RBP20.78■□□□□ 0.92
NCAN-204ENST00000590187 NPC1L1Q9UHC9 1359 aa20.78■□□□□ 0.92
NCAN-204ENST00000590187 IL2RBP14784 551 aa20.78■□□□□ 0.92
NCAN-204ENST00000590187 ZMYND15Q9H091 742 aa20.77■□□□□ 0.92
NCAN-204ENST00000590187 DISP2A7MBM2 1401 aa20.77■□□□□ 0.92
NCAN-204ENST00000590187 NBPF6Q5VWK0 638 aa20.77■□□□□ 0.91
NCAN-204ENST00000590187 NBPF4Q96M43 638 aa20.77■□□□□ 0.91
NCAN-204ENST00000590187 EXOC5O00471 708 aa20.75■□□□□ 0.91
NCAN-204ENST00000590187 ANP32AP39687 249 aaKnown RBP20.75■□□□□ 0.91
NCAN-204ENST00000590187 BRPF3Q9ULD4 1205 aa20.73■□□□□ 0.91
NCAN-204ENST00000590187 EIF4A2Q14240 407 aaKnown RBP20.73■□□□□ 0.91
NCAN-204ENST00000590187 MTHFSP49914 203 aa20.72■□□□□ 0.91
NCAN-204ENST00000590187 TNS2Q63HR2 1409 aa20.72■□□□□ 0.91
NCAN-204ENST00000590187 SF3B2Q13435 895 aaKnown RBP20.72■□□□□ 0.91
NCAN-204ENST00000590187 FAM196AQ6ZSG2 479 aa20.72■□□□□ 0.91
NCAN-204ENST00000590187 RAPGEF4Q8WZA2 1011 aa20.72■□□□□ 0.91
NCAN-204ENST00000590187 OVOS2A0A0G2JMS6 1433 aa20.7■□□□□ 0.9
NCAN-204ENST00000590187 MEGF6O75095 1541 aa20.7■□□□□ 0.9
NCAN-204ENST00000590187 EYA1Q99502 592 aa20.7■□□□□ 0.9
NCAN-204ENST00000590187 TATP17735 454 aaPredicted RBP20.69■□□□□ 0.9
NCAN-204ENST00000590187 MARCH10Q8NA82 808 aaPredicted RBP20.68■□□□□ 0.9
NCAN-204ENST00000590187 CCDC125Q86Z20 511 aa20.68■□□□□ 0.9
NCAN-204ENST00000590187 RGPD1P0DJD0 1748 aa20.68■□□□□ 0.9
NCAN-204ENST00000590187 DDX54Q8TDD1 881 aaKnown RBP20.67■□□□□ 0.9
NCAN-204ENST00000590187 TRIM37O94972 964 aa20.67■□□□□ 0.9
NCAN-204ENST00000590187 VSIG10Q8N0Z9 540 aa20.65■□□□□ 0.9
NCAN-204ENST00000590187 ZCRB1Q8TBF4 217 aaKnown RBP20.65■□□□□ 0.9
NCAN-204ENST00000590187 EP400Q96L91 3159 aa20.64■□□□□ 0.9
NCAN-204ENST00000590187 B4GALNT3Q6L9W6 998 aa20.64■□□□□ 0.89
NCAN-204ENST00000590187 PPP2R1AP30153 589 aa20.64■□□□□ 0.89
NCAN-204ENST00000590187 NEFMP07197 916 aa20.63■□□□□ 0.89
NCAN-204ENST00000590187 IGSF1Q8N6C5 1336 aa20.63■□□□□ 0.89
NCAN-204ENST00000590187 DIAPH1O60610 1272 aaKnown RBP20.63■□□□□ 0.89
NCAN-204ENST00000590187 CFAP53Q96M91 514 aa20.63■□□□□ 0.89
NCAN-204ENST00000590187 TNS1Q9HBL0 1735 aaKnown RBP20.62■□□□□ 0.89
NCAN-204ENST00000590187 NCAPD2Q15021 1401 aa20.62■□□□□ 0.89
NCAN-204ENST00000590187 IL13P35225 146 aa20.62■□□□□ 0.89
NCAN-204ENST00000590187 SHANK3Q9BYB0 1731 aa20.62■□□□□ 0.89
NCAN-204ENST00000590187 SBF2Q86WG5 1849 aa20.61■□□□□ 0.89
NCAN-204ENST00000590187 BAG6P46379 1132 aa20.61■□□□□ 0.89
NCAN-204ENST00000590187 DEFB132Q7Z7B7 95 aa20.61■□□□□ 0.89
NCAN-204ENST00000590187 PARD3Q8TEW0 1356 aa20.6■□□□□ 0.89
NCAN-204ENST00000590187 ACSBG1Q96GR2 724 aa20.6■□□□□ 0.89
NCAN-204ENST00000590187 SULT6B1Q6IMI4 303 aa20.59■□□□□ 0.89
NCAN-204ENST00000590187 U2SURPO15042 1029 aaKnown RBP20.59■□□□□ 0.89
NCAN-204ENST00000590187 APBA3O96018 575 aa20.59■□□□□ 0.89
NCAN-204ENST00000590187 AEBP1Q8IUX7 1158 aa20.59■□□□□ 0.89
NCAN-204ENST00000590187 PCDH11XQ9BZA7 1347 aa20.59■□□□□ 0.89
NCAN-204ENST00000590187 PCDH11YQ9BZA8 1340 aa20.59■□□□□ 0.89
NCAN-204ENST00000590187 PKD1L3Q7Z443 1732 aa20.59■□□□□ 0.89
NCAN-204ENST00000590187 SPG7Q9UQ90 795 aa20.58■□□□□ 0.89
NCAN-204ENST00000590187 COL3A1P02461 1466 aaPredicted RBP20.58■□□□□ 0.88
NCAN-204ENST00000590187 HMOX1P09601 288 aa20.57■□□□□ 0.88
NCAN-204ENST00000590187 RALBP1Q15311 655 aa20.56■□□□□ 0.88
NCAN-204ENST00000590187 KAT6BQ8WYB5 2073 aa20.56■□□□□ 0.88
NCAN-204ENST00000590187 BCL9O00512 1426 aa20.56■□□□□ 0.88
NCAN-204ENST00000590187 EN1Q05925 392 aaPredicted RBP20.56■□□□□ 0.88
NCAN-204ENST00000590187 DOT1LQ8TEK3 1739 aa20.55■□□□□ 0.88
NCAN-204ENST00000590187 NHSQ6T4R5 1651 aa20.55■□□□□ 0.88
NCAN-204ENST00000590187 HNRNPUQ00839 825 aaKnown RBP eCLIP20.55■□□□□ 0.88
NCAN-204ENST00000590187 FAM43AQ8N2R8 423 aa20.55■□□□□ 0.88
NCAN-204ENST00000590187 SYTL4Q96C24 671 aaPredicted RBP20.54■□□□□ 0.88
NCAN-204ENST00000590187 BCL11BQ9C0K0 894 aaPredicted RBP20.54■□□□□ 0.88
NCAN-204ENST00000590187 KCNQ2O43526 872 aa20.54■□□□□ 0.88
NCAN-204ENST00000590187 PTF1AQ7RTS3 328 aa20.54■□□□□ 0.88
NCAN-204ENST00000590187 GSE1Q14687 1217 aa20.53■□□□□ 0.88
NCAN-204ENST00000590187 NUDCQ9Y266 331 aa20.53■□□□□ 0.88
NCAN-204ENST00000590187 PLEKHO1Q53GL0 409 aaPredicted RBP20.53■□□□□ 0.88
NCAN-204ENST00000590187 CYP27B1O15528 508 aa20.52■□□□□ 0.88
NCAN-204ENST00000590187 KDRP35968 1356 aa20.51■□□□□ 0.87
NCAN-204ENST00000590187 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.51■□□□□ 0.87
NCAN-204ENST00000590187 EZH2Q15910 746 aaKnown RBP20.51■□□□□ 0.87
NCAN-204ENST00000590187 MYBBP1AQ9BQG0 1328 aaKnown RBP20.5■□□□□ 0.87
NCAN-204ENST00000590187 AMOTQ4VCS5 1084 aa20.5■□□□□ 0.87
NCAN-204ENST00000590187 ZNF530Q6P9A1 599 aaPredicted RBP20.5■□□□□ 0.87
NCAN-204ENST00000590187 IFNL2Q8IZJ0 200 aa20.5■□□□□ 0.87
NCAN-204ENST00000590187 PRIM1P49642 420 aaKnown RBP20.49■□□□□ 0.87
NCAN-204ENST00000590187 BTAF1O14981 1849 aa20.49■□□□□ 0.87
NCAN-204ENST00000590187 LAS1LQ9Y4W2 734 aaKnown RBP20.49■□□□□ 0.87
NCAN-204ENST00000590187 U2AF1L5P0DN76 240 aaPredicted RBP20.48■□□□□ 0.87
NCAN-204ENST00000590187 PHKG2P15735 406 aa20.48■□□□□ 0.87
NCAN-204ENST00000590187 U2AF1Q01081 240 aaKnown RBP eCLIP20.48■□□□□ 0.87
NCAN-204ENST00000590187 PLEKHG2Q9H7P9 1386 aa20.48■□□□□ 0.87
NCAN-204ENST00000590187 C1orf141Q5JVX7 400 aa20.48■□□□□ 0.87
NCAN-204ENST00000590187 CAMKK2Q96RR4 588 aa20.46■□□□□ 0.87
NCAN-204ENST00000590187 PRKRIP1Q9H875 184 aaPredicted RBP20.46■□□□□ 0.87
NCAN-204ENST00000590187 TOGARAM1Q9Y4F4 1720 aa20.46■□□□□ 0.87
NCAN-204ENST00000590187 RGPD3A6NKT7 1758 aaPredicted RBP20.44■□□□□ 0.86
NCAN-204ENST00000590187 RGPD4Q7Z3J3 1758 aa20.44■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms