RNA–Protein interactions for RNA: ENST00000589727.5

ATP6V0A1-222, Transcript of ATPase H+ transporting V0 subunit a1, human

TSL 5

Gene ATP6V0A1, Length 664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATP6V0A1-222	ENST00000589727	XPC	Q01831	940 aa	Predicted RBP	10.91	□□□□□ -0.66
ATP6V0A1-222	ENST00000589727	COL13A1	Q5TAT6	717 aa	Predicted RBP	10.91	□□□□□ -0.66
ATP6V0A1-222	ENST00000589727	WNT2B	Q93097	391 aa		10.91	□□□□□ -0.66
ATP6V0A1-222	ENST00000589727	KIAA1468	Q9P260	1216 aa		10.91	□□□□□ -0.66
ATP6V0A1-222	ENST00000589727	MARF1	Q9Y4F3	1742 aa	Known RBP	10.91	□□□□□ -0.66
ATP6V0A1-222	ENST00000589727	HAP1	P54257	671 aa	Predicted RBP	10.9	□□□□□ -0.66
ATP6V0A1-222	ENST00000589727	PTPN5	P54829	565 aa		10.9	□□□□□ -0.66
ATP6V0A1-222	ENST00000589727	TNS4	Q8IZW8	715 aa		10.9	□□□□□ -0.66
ATP6V0A1-222	ENST00000589727	FHDC1	Q9C0D6	1143 aa	Predicted RBP	10.9	□□□□□ -0.66
ATP6V0A1-222	ENST00000589727	CEP162	Q5TB80	1403 aa		10.9	□□□□□ -0.66
ATP6V0A1-222	ENST00000589727	CHD4	Q14839	1912 aa		10.9	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	FAM196A	Q6ZSG2	479 aa		10.89	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	ARHGEF1	Q92888	912 aa	Known RBP	10.89	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	TRIM6-TRIM34	B2RNG4	842 aa		10.88	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	PRIM1	P49642	420 aa	Known RBP	10.88	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	THSD4	Q6ZMP0	1018 aa		10.88	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	KCNV2	Q8TDN2	545 aa		10.88	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	LMTK2	Q8IWU2	1503 aa		10.88	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	TNS1	Q9HBL0	1735 aa	Known RBP	10.87	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	NRK	Q7Z2Y5	1582 aa		10.87	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	FOXO3	O43524	673 aa		10.87	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	ZBTB7A	O95365	584 aa		10.87	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	OSBP	P22059	807 aa		10.87	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	GPR162	Q16538	588 aa		10.87	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	ESCO1	Q5FWF5	840 aa		10.87	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	KIF15	Q9NS87	1388 aa		10.87	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	PXDN	Q92626	1479 aa		10.87	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	XRN1	Q8IZH2	1706 aa	Known RBP	10.87	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	ERBIN	Q96RT1	1412 aa		10.86	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	PLA2G2E	Q9NZK7	142 aa		10.86	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	ADGRL2	O95490	1459 aa		10.86	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	LAPTM4B	Q86VI4	370 aa		10.85	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	RRP7BP	Q9NSQ0	103 aa		10.85	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	ANKK1	Q8NFD2	765 aa		10.84	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	SEPT9	Q9UHD8	586 aa	Predicted RBP	10.84	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	MET	P08581	1390 aa		10.84	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	LRPPRC	P42704	1394 aa	Known RBP	10.84	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	TMEM131L	A2VDJ0	1609 aa		10.84	□□□□□ -0.67
ATP6V0A1-222	ENST00000589727	PACS2	Q86VP3	889 aa		10.83	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	NALCN	Q8IZF0	1738 aa		10.83	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	USP32	Q8NFA0	1604 aa		10.83	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	SPATA31A3	Q5VYP0	1347 aa		10.83	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	NUP188	Q5SRE5	1749 aa		10.82	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	CDCA7L	Q96GN5	454 aa		10.82	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	ZFR	Q96KR1	1074 aa	Known RBP	10.82	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	TSKS	Q9UJT2	592 aa		10.82	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	DLC1	Q96QB1	1528 aa		10.82	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	PTPN23	Q9H3S7	1636 aa		10.81	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	PRSS12	P56730	875 aa		10.81	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	CABLES1	Q8TDN4	633 aa		10.81	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	PDGFD	Q9GZP0	370 aa	Predicted RBP	10.81	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	CDHR5	Q9HBB8	845 aa		10.81	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	MYOM1	P52179	1685 aa		10.81	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	RREB1	Q92766	1687 aa		10.81	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	GCC2	Q8IWJ2	1684 aa		10.8	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	MYO5B	Q9ULV0	1848 aa		10.8	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	MLLT3	P42568	568 aa	Predicted RBP	10.8	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	APLP1	P51693	650 aa		10.8	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	GPBP1L1	Q9HC44	474 aa	Predicted RBP	10.8	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	SHANK3	Q9BYB0	1731 aa		10.8	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	NWD2	Q9ULI1	1742 aa		10.79	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	DNAJC5G	Q8N7S2	189 aa		10.79	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	BTG4	Q9NY30	223 aa		10.79	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	SPATA31A5	Q5VU36	1347 aa		10.79	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	SPATA31A7	Q8IWB4	1347 aa		10.79	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	BCAM	P50895	628 aa		10.78	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	GOLGB1	Q14789	3259 aa	Known RBP	10.78	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	ATP10D	Q9P241	1426 aa		10.77	□□□□□ -0.68
ATP6V0A1-222	ENST00000589727	SOWAHB	A6NEL2	793 aa		10.77	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	ARX	Q96QS3	562 aa		10.77	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	PLCH1	Q4KWH8	1693 aa		10.76	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	FAM198A	Q9UFP1	575 aa		10.76	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	MAP3K5	Q99683	1374 aa		10.76	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	PDE3B	Q13370	1112 aa		10.75	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	KRT28	Q7Z3Y7	464 aa		10.75	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	MTFR1L	Q9H019	292 aa		10.75	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	WWC3	Q9ULE0	1092 aa		10.75	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	ROBO2	Q9HCK4	1378 aa		10.75	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	NEXMIF	Q5QGS0	1516 aa		10.74	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	SMAP	O00193	183 aa		10.74	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	LMOD2	Q6P5Q4	547 aa		10.74	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	CCDC144A	A2RUR9	1427 aa		10.74	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	NRXN3	Q9Y4C0	1643 aa		10.73	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	THSD7A	Q9UPZ6	1657 aa		10.73	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	CASZ1	Q86V15	1759 aa		10.73	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	LRCH3	Q96II8	777 aa		10.73	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	NPDC1	Q9NQX5	325 aa	Predicted RBP	10.73	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	PNMA3	Q9UL41	463 aa		10.73	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	ABCC5	O15440	1437 aa		10.73	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	MYOM3	Q5VTT5	1437 aa		10.73	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	NUTM2F	A1L443	756 aa		10.72	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	NBPF26	B4DH59	902 aa		10.72	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	ZNF526	Q8TF50	670 aa	Predicted RBP	10.72	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	TATDN2	Q93075	761 aa		10.72	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	CDKN2AIP	Q9NXV6	580 aa	Predicted RBP	10.72	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	RBM27	Q9P2N5	1060 aa	Known RBP	10.72	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	C3orf80	F5H4A9	247 aa		10.71	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	GRIN3B	O60391	1043 aa		10.71	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	PSME1	Q06323	249 aa		10.71	□□□□□ -0.69
ATP6V0A1-222	ENST00000589727	TNS3	Q68CZ2	1445 aa		10.71	□□□□□ -0.69

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