RNA–Protein interactions for RNA: ENST00000589455.5

LINC01140-209, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-209ENST00000589455 COG3Q96JB2 828 aa22.22■■□□□ 1.15
LINC01140-209ENST00000589455 CCNL1Q9UK58 526 aaPredicted RBP22.22■■□□□ 1.15
LINC01140-209ENST00000589455 NSD2O96028 1365 aa22.22■■□□□ 1.15
LINC01140-209ENST00000589455 QSER1Q2KHR3 1735 aa22.21■■□□□ 1.15
LINC01140-209ENST00000589455 LTN1O94822 1766 aa22.21■■□□□ 1.15
LINC01140-209ENST00000589455 SLC24A1O60721 1099 aa22.21■■□□□ 1.15
LINC01140-209ENST00000589455 CGNL1Q0VF96 1302 aa22.21■■□□□ 1.15
LINC01140-209ENST00000589455 MAP3K19Q56UN5 1328 aa22.21■■□□□ 1.15
LINC01140-209ENST00000589455 COL24A1Q17RW2 1714 aa22.2■■□□□ 1.14
LINC01140-209ENST00000589455 AMPHP49418 695 aa22.2■■□□□ 1.14
LINC01140-209ENST00000589455 COL23A1Q86Y22 540 aaPredicted RBP22.19■■□□□ 1.14
LINC01140-209ENST00000589455 USP47Q96K76 1375 aa22.18■■□□□ 1.14
LINC01140-209ENST00000589455 YBX3P16989 372 aaKnown RBP eCLIP22.17■■□□□ 1.14
LINC01140-209ENST00000589455 IFFO2Q5TF58 517 aa22.17■■□□□ 1.14
LINC01140-209ENST00000589455 FLAD1Q8NFF5 587 aa22.17■■□□□ 1.14
LINC01140-209ENST00000589455 CD2APQ9Y5K6 639 aa22.17■■□□□ 1.14
LINC01140-209ENST00000589455 KAT6BQ8WYB5 2073 aa22.16■■□□□ 1.14
LINC01140-209ENST00000589455 MSH5O43196 834 aa22.16■■□□□ 1.14
LINC01140-209ENST00000589455 GOLGB1Q14789 3259 aaKnown RBP22.16■■□□□ 1.14
LINC01140-209ENST00000589455 FAM208AQ9UK61 1670 aaKnown RBP22.16■■□□□ 1.14
LINC01140-209ENST00000589455 RTL1A6NKG5 1358 aa22.14■■□□□ 1.14
LINC01140-209ENST00000589455 NBPF6Q5VWK0 638 aa22.13■■□□□ 1.13
LINC01140-209ENST00000589455 RAPGEF4Q8WZA2 1011 aa22.13■■□□□ 1.13
LINC01140-209ENST00000589455 NBPF4Q96M43 638 aa22.13■■□□□ 1.13
LINC01140-209ENST00000589455 MEGF6O75095 1541 aa22.12■■□□□ 1.13
LINC01140-209ENST00000589455 TESK2Q96S53 571 aa22.12■■□□□ 1.13
LINC01140-209ENST00000589455 LY75O60449 1722 aa22.1■■□□□ 1.13
LINC01140-209ENST00000589455 FBLN1P23142 703 aa22.1■■□□□ 1.13
LINC01140-209ENST00000589455 SHANK3Q9BYB0 1731 aa22.1■■□□□ 1.13
LINC01140-209ENST00000589455 TATP17735 454 aaPredicted RBP22.09■■□□□ 1.13
LINC01140-209ENST00000589455 MSL1Q68DK7 614 aa22.08■■□□□ 1.13
LINC01140-209ENST00000589455 PCDH11XQ9BZA7 1347 aa22.07■■□□□ 1.12
LINC01140-209ENST00000589455 PCDH11YQ9BZA8 1340 aa22.07■■□□□ 1.12
LINC01140-209ENST00000589455 SMG6Q86US8 1419 aaKnown RBP22.07■■□□□ 1.12
LINC01140-209ENST00000589455 ATP10DQ9P241 1426 aa22.07■■□□□ 1.12
LINC01140-209ENST00000589455 GPBP1L1Q9HC44 474 aaPredicted RBP22.07■■□□□ 1.12
LINC01140-209ENST00000589455 DOT1LQ8TEK3 1739 aa22.06■■□□□ 1.12
LINC01140-209ENST00000589455 CEP350Q5VT06 3117 aa22.06■■□□□ 1.12
LINC01140-209ENST00000589455 ST20-MTHFSA0A0A6YYL1 179 aa22.06■■□□□ 1.12
LINC01140-209ENST00000589455 FYB1O15117 783 aa22.06■■□□□ 1.12
LINC01140-209ENST00000589455 RRS1Q15050 365 aaKnown RBP22.06■■□□□ 1.12
LINC01140-209ENST00000589455 SMARCC1Q92922 1105 aaPredicted RBP22.06■■□□□ 1.12
LINC01140-209ENST00000589455 PALLDQ8WX93 1383 aa22.05■■□□□ 1.12
LINC01140-209ENST00000589455 TONSLQ96HA7 1378 aa22.05■■□□□ 1.12
LINC01140-209ENST00000589455 KIF24Q5T7B8 1368 aa22.04■■□□□ 1.12
LINC01140-209ENST00000589455 USHBP1Q8N6Y0 703 aa22.04■■□□□ 1.12
LINC01140-209ENST00000589455 TUBGCP6Q96RT7 1819 aa22.03■■□□□ 1.12
LINC01140-209ENST00000589455 INSRP06213 1382 aa22.03■■□□□ 1.12
LINC01140-209ENST00000589455 MPRIPQ6WCQ1 1025 aa22.03■■□□□ 1.12
LINC01140-209ENST00000589455 ADCY9O60503 1353 aa22.02■■□□□ 1.12
LINC01140-209ENST00000589455 HSPA6P17066 643 aa22.01■■□□□ 1.11
LINC01140-209ENST00000589455 HSP90AB2PQ58FF8 381 aa22.01■■□□□ 1.11
LINC01140-209ENST00000589455 AK7Q96M32 723 aa22.01■■□□□ 1.11
LINC01140-209ENST00000589455 GGNBP2Q9H3C7 697 aa22.01■■□□□ 1.11
LINC01140-209ENST00000589455 NSD3Q9BZ95 1437 aa22■■□□□ 1.11
LINC01140-209ENST00000589455 CYP27B1O15528 508 aa22■■□□□ 1.11
LINC01140-209ENST00000589455 FLT4P35916 1363 aa21.99■■□□□ 1.11
LINC01140-209ENST00000589455 NKX1-1Q15270 411 aaPredicted RBP21.98■■□□□ 1.11
LINC01140-209ENST00000589455 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP21.97■■□□□ 1.11
LINC01140-209ENST00000589455 SSFA2P28290 1259 aa21.97■■□□□ 1.11
LINC01140-209ENST00000589455 TMF1P82094 1093 aa21.97■■□□□ 1.11
LINC01140-209ENST00000589455 PIGBQ92521 554 aa21.96■■□□□ 1.11
LINC01140-209ENST00000589455 IGSF1Q8N6C5 1336 aa21.96■■□□□ 1.11
LINC01140-209ENST00000589455 C5P01031 1676 aa21.95■■□□□ 1.1
LINC01140-209ENST00000589455 CDCA8Q53HL2 280 aa21.94■■□□□ 1.1
LINC01140-209ENST00000589455 AMIGO3Q86WK7 504 aa21.94■■□□□ 1.1
LINC01140-209ENST00000589455 LOC102724428A0A0B4J2F2 783 aa21.93■■□□□ 1.1
LINC01140-209ENST00000589455 SIK1P57059 783 aa21.93■■□□□ 1.1
LINC01140-209ENST00000589455 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.93■■□□□ 1.1
LINC01140-209ENST00000589455 SPG7Q9UQ90 795 aa21.93■■□□□ 1.1
LINC01140-209ENST00000589455 RGPD2P0DJD1 1756 aa21.92■■□□□ 1.1
LINC01140-209ENST00000589455 PHF14O94880 888 aa21.92■■□□□ 1.1
LINC01140-209ENST00000589455 ZNF526Q8TF50 670 aaPredicted RBP21.92■■□□□ 1.1
LINC01140-209ENST00000589455 C4BP0C0L5 1744 aa21.9■■□□□ 1.1
LINC01140-209ENST00000589455 NCAPD2Q15021 1401 aa21.89■■□□□ 1.1
LINC01140-209ENST00000589455 KIF3CO14782 793 aa21.89■■□□□ 1.09
LINC01140-209ENST00000589455 LINC00116Q8NCU8 138 aa21.89■■□□□ 1.09
LINC01140-209ENST00000589455 TMOD3Q9NYL9 352 aa21.88■■□□□ 1.09
LINC01140-209ENST00000589455 WASHC2AQ641Q2 1341 aa21.86■■□□□ 1.09
LINC01140-209ENST00000589455 GNPATO15228 680 aa21.86■■□□□ 1.09
LINC01140-209ENST00000589455 TGFB2P61812 414 aa21.86■■□□□ 1.09
LINC01140-209ENST00000589455 SMIM5Q71RC9 77 aa21.86■■□□□ 1.09
LINC01140-209ENST00000589455 EMILIN1Q9Y6C2 1016 aa21.86■■□□□ 1.09
LINC01140-209ENST00000589455 TAF1LQ8IZX4 1826 aa21.85■■□□□ 1.09
LINC01140-209ENST00000589455 ATP6V1AP38606 617 aa21.85■■□□□ 1.09
LINC01140-209ENST00000589455 IFNL2Q8IZJ0 200 aa21.85■■□□□ 1.09
LINC01140-209ENST00000589455 CARD14Q9BXL6 1004 aa21.85■■□□□ 1.09
LINC01140-209ENST00000589455 ASAP1Q9ULH1 1129 aa21.85■■□□□ 1.09
LINC01140-209ENST00000589455 MMP10P09238 476 aa21.84■■□□□ 1.09
LINC01140-209ENST00000589455 APLP1P51693 650 aa21.84■■□□□ 1.09
LINC01140-209ENST00000589455 ITPK1Q13572 414 aa21.84■■□□□ 1.09
LINC01140-209ENST00000589455 NLGN1Q8N2Q7 840 aa21.84■■□□□ 1.09
LINC01140-209ENST00000589455 WWC3Q9ULE0 1092 aa21.84■■□□□ 1.09
LINC01140-209ENST00000589455 PLEKHG2Q9H7P9 1386 aa21.83■■□□□ 1.08
LINC01140-209ENST00000589455 PPM1GO15355 546 aaPredicted RBP21.82■■□□□ 1.08
LINC01140-209ENST00000589455 TOMM70O94826 608 aa21.82■■□□□ 1.08
LINC01140-209ENST00000589455 PHKG2P15735 406 aa21.82■■□□□ 1.08
LINC01140-209ENST00000589455 TRAPPC3LQ5T215 181 aa21.82■■□□□ 1.08
LINC01140-209ENST00000589455 EYA1Q99502 592 aa21.82■■□□□ 1.08
LINC01140-209ENST00000589455 TOGARAM1Q9Y4F4 1720 aa21.81■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms