RNA–Protein interactions for RNA: ENST00000589444.1

PTPN2-209, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

Gene PTPN2, Length 2,264 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-209ENST00000589444 PCDHB13Q9Y5F0 798 aa6.98□□□□□ -1.29
PTPN2-209ENST00000589444 TTC36A6NLP5 189 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 NRDCO43847 1150 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 CD53P19397 219 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 CCDC96Q2M329 555 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 ZKSCAN2Q63HK3 967 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 ICE2Q659A1 982 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 TMEM87AQ8NBN3 555 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 SLAIN1Q8ND83 568 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 ZNF512BQ96KM6 892 aaPredicted RBP6.97□□□□□ -1.29
PTPN2-209ENST00000589444 PCGF6Q9BYE7 350 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 INO80BQ9C086 356 aaPredicted RBP6.97□□□□□ -1.29
PTPN2-209ENST00000589444 COLQQ9Y215 455 aaPredicted RBP6.97□□□□□ -1.29
PTPN2-209ENST00000589444 RPGRIP1LQ68CZ1 1315 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 CLGNO14967 610 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 ATP9BO43861 1147 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 ST18O60284 1047 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 XRCC5P13010 732 aaKnown RBP6.97□□□□□ -1.29
PTPN2-209ENST00000589444 MAPK1P28482 360 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 TUSC1Q2TAM9 212 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 HELBQ8NG08 1087 aaPredicted RBP6.97□□□□□ -1.29
PTPN2-209ENST00000589444 CEP63Q96MT8 703 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 ACBD3Q9H3P7 528 aa6.97□□□□□ -1.29
PTPN2-209ENST00000589444 USP17L8P0C7I0 530 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 SOX11P35716 441 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 MMRN1Q13201 1228 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 RIC3Q7Z5B4 369 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 FRMD6Q96NE9 622 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 FRMD4BQ9Y2L6 1034 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 NUB1Q9Y5A7 615 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 PPP1R12AO14974 1030 aaPredicted RBP6.96□□□□□ -1.3
PTPN2-209ENST00000589444 AMPD3Q01432 767 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 POU5F1BQ06416 359 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 NFE2L2Q16236 605 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 CSPP1Q1MSJ5 1256 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 NBPF11Q86T75 865 aa6.96□□□□□ -1.3
PTPN2-209ENST00000589444 CLP1Q92989 425 aaKnown RBP6.96□□□□□ -1.3
PTPN2-209ENST00000589444 TTF2Q9UNY4 1162 aaKnown RBP6.96□□□□□ -1.3
PTPN2-209ENST00000589444 GPR37L1O60883 481 aa6.95□□□□□ -1.3
PTPN2-209ENST00000589444 ENOX2Q16206 610 aaKnown RBP6.95□□□□□ -1.3
PTPN2-209ENST00000589444 ZSCAN29Q8IWY8 852 aaPredicted RBP6.95□□□□□ -1.3
PTPN2-209ENST00000589444 RNF34Q969K3 372 aa6.95□□□□□ -1.3
PTPN2-209ENST00000589444 RELTQ969Z4 430 aa6.95□□□□□ -1.3
PTPN2-209ENST00000589444 MRFAP1L1Q96HT8 127 aa6.95□□□□□ -1.3
PTPN2-209ENST00000589444 METTL5Q9NRN9 209 aaKnown RBP6.95□□□□□ -1.3
PTPN2-209ENST00000589444 PRKAB1Q9Y478 270 aa6.95□□□□□ -1.3
PTPN2-209ENST00000589444 LDHAP00338 332 aaKnown RBP6.94□□□□□ -1.3
PTPN2-209ENST00000589444 FGAP02671 866 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 TNNI2P48788 182 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 ARID5AQ03989 594 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 ODR4Q5SWX8 454 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 GET4Q7L5D6 327 aaPredicted RBP6.94□□□□□ -1.3
PTPN2-209ENST00000589444 SPNS2Q8IVW8 549 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 PDILTQ8N807 584 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 PRPF38AQ8NAV1 312 aaKnown RBP6.94□□□□□ -1.3
PTPN2-209ENST00000589444 C1orf131Q8NDD1 294 aaKnown RBP6.94□□□□□ -1.3
PTPN2-209ENST00000589444 TSPAN18Q96SJ8 248 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 TRPC6Q9Y210 931 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 KDM4FA0A1W2PPD8 638 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 RGS20O76081 388 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 FANCCQ00597 558 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 ZRSR2Q15696 482 aaKnown RBP6.94□□□□□ -1.3
PTPN2-209ENST00000589444 CASS4Q9NQ75 786 aa6.94□□□□□ -1.3
PTPN2-209ENST00000589444 GPHNQ9NQX3 736 aaPredicted RBP6.94□□□□□ -1.3
PTPN2-209ENST00000589444 PLCG2P16885 1265 aa6.93□□□□□ -1.3
PTPN2-209ENST00000589444 DEKP35659 375 aaKnown RBP6.93□□□□□ -1.3
PTPN2-209ENST00000589444 EFCAB2Q5VUJ9 269 aa6.93□□□□□ -1.3
PTPN2-209ENST00000589444 EGFL7Q9UHF1 273 aa6.93□□□□□ -1.3
PTPN2-209ENST00000589444 DCTN4Q9UJW0 460 aa6.93□□□□□ -1.3
PTPN2-209ENST00000589444 TRIM35Q9UPQ4 493 aa6.93□□□□□ -1.3
PTPN2-209ENST00000589444 SMARCA2P51531 1590 aa6.93□□□□□ -1.3
PTPN2-209ENST00000589444 ATP2B4P23634 1241 aa6.93□□□□□ -1.3
PTPN2-209ENST00000589444 NBPF1Q3BBV0 1214 aa6.93□□□□□ -1.3
PTPN2-209ENST00000589444 CREBRFQ8IUR6 639 aa6.93□□□□□ -1.3
PTPN2-209ENST00000589444 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.93□□□□□ -1.3
PTPN2-209ENST00000589444 SLC39A13Q96H72 371 aa6.93□□□□□ -1.3
PTPN2-209ENST00000589444 ERBB3P21860 1342 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 IFRD1O00458 451 aaPredicted RBP6.92□□□□□ -1.3
PTPN2-209ENST00000589444 POLD1P28340 1107 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 FAM69CQ0P6D2 419 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 TTC39BQ5VTQ0 682 aaPredicted RBP6.92□□□□□ -1.3
PTPN2-209ENST00000589444 MS4A4AQ96JQ5 239 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 APBA2Q99767 749 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 IER2Q9BTL4 223 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 TMX1Q9H3N1 280 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 CABP2Q9NPB3 220 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 ANAPC4Q9UJX5 808 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 MYO15BQ96JP2 1530 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 PPP1R3GB7ZBB8 358 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 MAPRE1Q15691 268 aaKnown RBP6.92□□□□□ -1.3
PTPN2-209ENST00000589444 VPS72Q15906 364 aa6.92□□□□□ -1.3
PTPN2-209ENST00000589444 AVENQ9NQS1 362 aaPredicted RBP6.92□□□□□ -1.3
PTPN2-209ENST00000589444 PLIN1O60240 522 aa6.91□□□□□ -1.3
PTPN2-209ENST00000589444 VDRP11473 427 aa6.91□□□□□ -1.3
PTPN2-209ENST00000589444 COL6A1P12109 1028 aa6.91□□□□□ -1.3
PTPN2-209ENST00000589444 GNALP38405 381 aa6.91□□□□□ -1.3
PTPN2-209ENST00000589444 SEMA3FQ13275 785 aa6.91□□□□□ -1.3
PTPN2-209ENST00000589444 PLEKHG4Q58EX7 1191 aa6.91□□□□□ -1.3
PTPN2-209ENST00000589444 CCDC174Q6PII3 467 aa6.91□□□□□ -1.3
PTPN2-209ENST00000589444 CHMP4BQ9H444 224 aaKnown RBP6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms