RNA–Protein interactions for RNA: ENST00000588935.1

CNN1-208, Transcript of calponin 1, humanhuman

TSL 5

Gene CNN1, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-208ENST00000588935 WDR43Q15061 677 aaKnown RBP eCLIP19.47■□□□□ 0.71
CNN1-208ENST00000588935 ZCRB1Q8TBF4 217 aaKnown RBP19.47■□□□□ 0.71
CNN1-208ENST00000588935 RGPD1P0DJD0 1748 aa19.46■□□□□ 0.71
CNN1-208ENST00000588935 DISP2A7MBM2 1401 aa19.46■□□□□ 0.71
CNN1-208ENST00000588935 KRT27Q7Z3Y8 459 aa19.46■□□□□ 0.71
CNN1-208ENST00000588935 PRKAR2BP31323 418 aa19.45■□□□□ 0.7
CNN1-208ENST00000588935 THSD7AQ9UPZ6 1657 aa19.44■□□□□ 0.7
CNN1-208ENST00000588935 PLEKHO1Q53GL0 409 aaPredicted RBP19.43■□□□□ 0.7
CNN1-208ENST00000588935 MARCH10Q8NA82 808 aaPredicted RBP19.43■□□□□ 0.7
CNN1-208ENST00000588935 RSPH6AQ9H0K4 717 aa19.43■□□□□ 0.7
CNN1-208ENST00000588935 ADAMTS8Q9UP79 889 aa19.43■□□□□ 0.7
CNN1-208ENST00000588935 SPG7Q9UQ90 795 aa19.43■□□□□ 0.7
CNN1-208ENST00000588935 NCAPD2Q15021 1401 aa19.42■□□□□ 0.7
CNN1-208ENST00000588935 CCDC146Q8IYE0 955 aa19.42■□□□□ 0.7
CNN1-208ENST00000588935 PARP4Q9UKK3 1724 aaKnown RBP19.42■□□□□ 0.7
CNN1-208ENST00000588935 OVOS2A0A0G2JMS6 1433 aa19.42■□□□□ 0.7
CNN1-208ENST00000588935 LRRC37A3O60309 1634 aa19.41■□□□□ 0.7
CNN1-208ENST00000588935 FCHSD2O94868 740 aa19.41■□□□□ 0.7
CNN1-208ENST00000588935 FAM9BQ8IZU0 186 aa19.41■□□□□ 0.7
CNN1-208ENST00000588935 PHACTR3Q96KR7 559 aa19.41■□□□□ 0.7
CNN1-208ENST00000588935 KDRP35968 1356 aa19.41■□□□□ 0.7
CNN1-208ENST00000588935 ZNF530Q6P9A1 599 aaPredicted RBP19.4■□□□□ 0.7
CNN1-208ENST00000588935 SENP3-EIF4A1A0A087X0R7 540 aa19.39■□□□□ 0.69
CNN1-208ENST00000588935 MTHFSDQ2M296 383 aaKnown RBP19.39■□□□□ 0.69
CNN1-208ENST00000588935 PNISRQ8TF01 805 aaKnown RBP19.39■□□□□ 0.69
CNN1-208ENST00000588935 CYP27B1O15528 508 aa19.38■□□□□ 0.69
CNN1-208ENST00000588935 NEFMP07197 916 aa19.38■□□□□ 0.69
CNN1-208ENST00000588935 AMOTQ4VCS5 1084 aa19.38■□□□□ 0.69
CNN1-208ENST00000588935 TNS2Q63HR2 1409 aa19.38■□□□□ 0.69
CNN1-208ENST00000588935 ACSBG1Q96GR2 724 aa19.37■□□□□ 0.69
CNN1-208ENST00000588935 PCDH11XQ9BZA7 1347 aa19.36■□□□□ 0.69
CNN1-208ENST00000588935 PCDH11YQ9BZA8 1340 aa19.36■□□□□ 0.69
CNN1-208ENST00000588935 CCER2I3L3R5 266 aa19.36■□□□□ 0.69
CNN1-208ENST00000588935 C1orf141Q5JVX7 400 aa19.36■□□□□ 0.69
CNN1-208ENST00000588935 IFNL2Q8IZJ0 200 aa19.36■□□□□ 0.69
CNN1-208ENST00000588935 PNNQ9H307 717 aaKnown RBP19.36■□□□□ 0.69
CNN1-208ENST00000588935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.36■□□□□ 0.69
CNN1-208ENST00000588935 MAPK8IP3Q9UPT6 1336 aa19.35■□□□□ 0.69
CNN1-208ENST00000588935 PLEKHF1Q96S99 279 aa19.35■□□□□ 0.69
CNN1-208ENST00000588935 SHANK3Q9BYB0 1731 aa19.34■□□□□ 0.69
CNN1-208ENST00000588935 PHKG2P15735 406 aa19.34■□□□□ 0.69
CNN1-208ENST00000588935 FAM196AQ6ZSG2 479 aa19.34■□□□□ 0.69
CNN1-208ENST00000588935 PKD1L3Q7Z443 1732 aa19.34■□□□□ 0.69
CNN1-208ENST00000588935 NEUROD2Q15784 382 aa19.33■□□□□ 0.68
CNN1-208ENST00000588935 MPRIPQ6WCQ1 1025 aa19.33■□□□□ 0.68
CNN1-208ENST00000588935 SYTL4Q96C24 671 aaPredicted RBP19.33■□□□□ 0.68
CNN1-208ENST00000588935 RRP7AQ9Y3A4 280 aaKnown RBP19.33■□□□□ 0.68
CNN1-208ENST00000588935 TRIM37O94972 964 aa19.32■□□□□ 0.68
CNN1-208ENST00000588935 GAS2L2Q8NHY3 880 aa19.32■□□□□ 0.68
CNN1-208ENST00000588935 RUNDC1Q96C34 613 aa19.32■□□□□ 0.68
CNN1-208ENST00000588935 KCNQ2O43526 872 aa19.31■□□□□ 0.68
CNN1-208ENST00000588935 PTF1AQ7RTS3 328 aa19.31■□□□□ 0.68
CNN1-208ENST00000588935 PRIM1P49642 420 aaKnown RBP19.3■□□□□ 0.68
CNN1-208ENST00000588935 AKAP4Q5JQC9 854 aa19.3■□□□□ 0.68
CNN1-208ENST00000588935 LGR6Q9HBX8 967 aa19.3■□□□□ 0.68
CNN1-208ENST00000588935 GNAT3A8MTJ3 354 aa19.28■□□□□ 0.68
CNN1-208ENST00000588935 APAF1O14727 1248 aa19.28■□□□□ 0.68
CNN1-208ENST00000588935 NFE2L2Q16236 605 aa19.28■□□□□ 0.68
CNN1-208ENST00000588935 HSP90AB1P08238 724 aaKnown RBP19.27■□□□□ 0.68
CNN1-208ENST00000588935 RIPK4P57078 832 aa19.27■□□□□ 0.68
CNN1-208ENST00000588935 DCTN1Q14203 1278 aa19.27■□□□□ 0.68
CNN1-208ENST00000588935 NKX1-1Q15270 411 aaPredicted RBP19.27■□□□□ 0.68
CNN1-208ENST00000588935 SALL2Q9Y467 1007 aaPredicted RBP19.27■□□□□ 0.68
CNN1-208ENST00000588935 SBF2Q86WG5 1849 aa19.26■□□□□ 0.67
CNN1-208ENST00000588935 RNMTO43148 476 aaKnown RBP19.26■□□□□ 0.67
CNN1-208ENST00000588935 TMPOP42166 694 aaKnown RBP19.26■□□□□ 0.67
CNN1-208ENST00000588935 RTF1Q92541 710 aaKnown RBP19.26■□□□□ 0.67
CNN1-208ENST00000588935 DCAF5Q96JK2 942 aa19.26■□□□□ 0.67
CNN1-208ENST00000588935 DLG5Q8TDM6 1919 aa19.25■□□□□ 0.67
CNN1-208ENST00000588935 MAP3K5Q99683 1374 aa19.25■□□□□ 0.67
CNN1-208ENST00000588935 MCM10Q7L590 875 aa19.25■□□□□ 0.67
CNN1-208ENST00000588935 IL17REQ8NFR9 667 aa19.25■□□□□ 0.67
CNN1-208ENST00000588935 CABP4P57796 275 aa19.24■□□□□ 0.67
CNN1-208ENST00000588935 SF3B2Q13435 895 aaKnown RBP19.24■□□□□ 0.67
CNN1-208ENST00000588935 UPF1Q92900 1129 aaKnown RBP eCLIP19.24■□□□□ 0.67
CNN1-208ENST00000588935 DOT1LQ8TEK3 1739 aa19.24■□□□□ 0.67
CNN1-208ENST00000588935 VIRMAQ69YN4 1812 aaKnown RBP19.23■□□□□ 0.67
CNN1-208ENST00000588935 PLEKHG2Q9H7P9 1386 aa19.23■□□□□ 0.67
CNN1-208ENST00000588935 APBA3O96018 575 aa19.23■□□□□ 0.67
CNN1-208ENST00000588935 THUMPD2Q9BTF0 503 aaKnown RBP19.23■□□□□ 0.67
CNN1-208ENST00000588935 KDM6AO15550 1401 aaPredicted RBP19.23■□□□□ 0.67
CNN1-208ENST00000588935 NFATC2IPQ8NCF5 419 aa19.22■□□□□ 0.67
CNN1-208ENST00000588935 BCL11BQ9C0K0 894 aaPredicted RBP19.22■□□□□ 0.67
CNN1-208ENST00000588935 TMOD3Q9NYL9 352 aa19.22■□□□□ 0.67
CNN1-208ENST00000588935 ITGB4P16144 1822 aa19.22■□□□□ 0.67
CNN1-208ENST00000588935 PIGBQ92521 554 aa19.21■□□□□ 0.67
CNN1-208ENST00000588935 TOGARAM1Q9Y4F4 1720 aa19.21■□□□□ 0.67
CNN1-208ENST00000588935 SCN11AQ9UI33 1791 aa19.2■□□□□ 0.66
CNN1-208ENST00000588935 ERVV-2B6SEH9 535 aa19.2■□□□□ 0.66
CNN1-208ENST00000588935 DEFB132Q7Z7B7 95 aa19.2■□□□□ 0.66
CNN1-208ENST00000588935 BCL9O00512 1426 aa19.19■□□□□ 0.66
CNN1-208ENST00000588935 TEFQ10587 303 aa19.19■□□□□ 0.66
CNN1-208ENST00000588935 HTATSF1O43719 755 aaKnown RBP19.18■□□□□ 0.66
CNN1-208ENST00000588935 SLC52A2Q9HAB3 445 aa19.18■□□□□ 0.66
CNN1-208ENST00000588935 EN1Q05925 392 aaPredicted RBP19.17■□□□□ 0.66
CNN1-208ENST00000588935 ASAP1Q9ULH1 1129 aa19.17■□□□□ 0.66
CNN1-208ENST00000588935 TRIM35Q9UPQ4 493 aa19.17■□□□□ 0.66
CNN1-208ENST00000588935 NHSQ6T4R5 1651 aa19.17■□□□□ 0.66
CNN1-208ENST00000588935 BTAF1O14981 1849 aa19.16■□□□□ 0.66
CNN1-208ENST00000588935 LMOD3Q0VAK6 560 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms