RNA–Protein interactions for RNA: ENST00000588885.1

RFX1-204, Transcript of regulatory factor X1, humanhuman

TSL 3

Gene RFX1, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-204ENST00000588885 RGPD4Q7Z3J3 1758 aa15.9■□□□□ 0.14
RFX1-204ENST00000588885 TNS2Q63HR2 1409 aa15.9■□□□□ 0.14
RFX1-204ENST00000588885 PEAK1Q9H792 1746 aa15.9■□□□□ 0.14
RFX1-204ENST00000588885 RTL1A6NKG5 1358 aa15.88■□□□□ 0.13
RFX1-204ENST00000588885 PLSCR1O15162 318 aa15.88■□□□□ 0.13
RFX1-204ENST00000588885 PROM2Q8N271 834 aa15.88■□□□□ 0.13
RFX1-204ENST00000588885 ZCRB1Q8TBF4 217 aaKnown RBP15.88■□□□□ 0.13
RFX1-204ENST00000588885 U3KPZ7 1027 aaPredicted RBP15.87■□□□□ 0.13
RFX1-204ENST00000588885 INSRP06213 1382 aa15.87■□□□□ 0.13
RFX1-204ENST00000588885 FLT4P35916 1363 aa15.87■□□□□ 0.13
RFX1-204ENST00000588885 BCL9O00512 1426 aa15.86■□□□□ 0.13
RFX1-204ENST00000588885 MYOM1P52179 1685 aa15.86■□□□□ 0.13
RFX1-204ENST00000588885 RAPGEF4Q8WZA2 1011 aa15.86■□□□□ 0.13
RFX1-204ENST00000588885 POLKQ9UBT6 870 aa15.86■□□□□ 0.13
RFX1-204ENST00000588885 PPP1R1BQ9UD71 204 aaPredicted RBP15.86■□□□□ 0.13
RFX1-204ENST00000588885 SMG6Q86US8 1419 aaKnown RBP15.85■□□□□ 0.13
RFX1-204ENST00000588885 TXNRD1Q16881 649 aa15.85■□□□□ 0.13
RFX1-204ENST00000588885 SYTL4Q96C24 671 aaPredicted RBP15.85■□□□□ 0.13
RFX1-204ENST00000588885 FAM208AQ9UK61 1670 aaKnown RBP15.84■□□□□ 0.13
RFX1-204ENST00000588885 TATP17735 454 aaPredicted RBP15.84■□□□□ 0.13
RFX1-204ENST00000588885 KIF7Q2M1P5 1343 aa15.84■□□□□ 0.13
RFX1-204ENST00000588885 PRIM1P49642 420 aaKnown RBP15.83■□□□□ 0.12
RFX1-204ENST00000588885 ANO8Q9HCE9 1232 aaPredicted RBP15.83■□□□□ 0.12
RFX1-204ENST00000588885 KNSTRNQ9Y448 316 aa15.83■□□□□ 0.12
RFX1-204ENST00000588885 MEGF6O75095 1541 aa15.83■□□□□ 0.12
RFX1-204ENST00000588885 MORC1Q86VD1 984 aa15.82■□□□□ 0.12
RFX1-204ENST00000588885 WASHC2AQ641Q2 1341 aa15.82■□□□□ 0.12
RFX1-204ENST00000588885 CNGB1Q14028 1251 aaPredicted RBP15.81■□□□□ 0.12
RFX1-204ENST00000588885 NCBP3Q53F19 620 aaKnown RBP15.81■□□□□ 0.12
RFX1-204ENST00000588885 KIF24Q5T7B8 1368 aa15.81■□□□□ 0.12
RFX1-204ENST00000588885 EYA1Q99502 592 aa15.81■□□□□ 0.12
RFX1-204ENST00000588885 KIF20BQ96Q89 1820 aa15.8■□□□□ 0.12
RFX1-204ENST00000588885 NHSQ6T4R5 1651 aa15.8■□□□□ 0.12
RFX1-204ENST00000588885 SPON1Q9HCB6 807 aa15.8■□□□□ 0.12
RFX1-204ENST00000588885 BTAF1O14981 1849 aa15.8■□□□□ 0.12
RFX1-204ENST00000588885 RGPD2P0DJD1 1756 aa15.8■□□□□ 0.12
RFX1-204ENST00000588885 EIF4A2Q14240 407 aaKnown RBP15.79■□□□□ 0.12
RFX1-204ENST00000588885 PDGFDQ9GZP0 370 aaPredicted RBP15.79■□□□□ 0.12
RFX1-204ENST00000588885 STK32BQ9NY57 414 aa15.79■□□□□ 0.12
RFX1-204ENST00000588885 KCNQ4P56696 695 aa15.78■□□□□ 0.12
RFX1-204ENST00000588885 CYP27B1O15528 508 aa15.76■□□□□ 0.11
RFX1-204ENST00000588885 SLC15A2Q16348 729 aa15.76■□□□□ 0.11
RFX1-204ENST00000588885 CC2D1BQ5T0F9 858 aaKnown RBP15.76■□□□□ 0.11
RFX1-204ENST00000588885 LRRC4BQ9NT99 713 aa15.76■□□□□ 0.11
RFX1-204ENST00000588885 CASZ1Q86V15 1759 aa15.75■□□□□ 0.11
RFX1-204ENST00000588885 PCDH11XQ9BZA7 1347 aa15.75■□□□□ 0.11
RFX1-204ENST00000588885 PCDH11YQ9BZA8 1340 aa15.75■□□□□ 0.11
RFX1-204ENST00000588885 ZBTB7AO95365 584 aa15.75■□□□□ 0.11
RFX1-204ENST00000588885 AMER1Q5JTC6 1135 aaPredicted RBP15.75■□□□□ 0.11
RFX1-204ENST00000588885 NSD2O96028 1365 aa15.75■□□□□ 0.11
RFX1-204ENST00000588885 SPG7Q9UQ90 795 aa15.74■□□□□ 0.11
RFX1-204ENST00000588885 MPRIPQ6WCQ1 1025 aa15.73■□□□□ 0.11
RFX1-204ENST00000588885 ATF5Q9Y2D1 282 aaPredicted RBP15.73■□□□□ 0.11
RFX1-204ENST00000588885 DOT1LQ8TEK3 1739 aa15.73■□□□□ 0.11
RFX1-204ENST00000588885 PER1O15534 1290 aaPredicted RBP15.72■□□□□ 0.11
RFX1-204ENST00000588885 ZNF827Q17R98 1081 aa15.72■□□□□ 0.11
RFX1-204ENST00000588885 SLC27A3Q5K4L6 730 aa15.7■□□□□ 0.1
RFX1-204ENST00000588885 AEBP1Q8IUX7 1158 aa15.7■□□□□ 0.1
RFX1-204ENST00000588885 CCNL1Q9UK58 526 aaPredicted RBP15.7■□□□□ 0.1
RFX1-204ENST00000588885 MTHFSP49914 203 aa15.69■□□□□ 0.1
RFX1-204ENST00000588885 IGSF1Q8N6C5 1336 aa15.68■□□□□ 0.1
RFX1-204ENST00000588885 MAP2P11137 1827 aaKnown RBP15.68■□□□□ 0.1
RFX1-204ENST00000588885 IFNL2Q8IZJ0 200 aa15.68■□□□□ 0.1
RFX1-204ENST00000588885 PIGBQ92521 554 aa15.68■□□□□ 0.1
RFX1-204ENST00000588885 AKT1S1Q96B36 256 aa15.68■□□□□ 0.1
RFX1-204ENST00000588885 TFCP2L1Q9NZI6 479 aa15.68■□□□□ 0.1
RFX1-204ENST00000588885 NCAPD2Q15021 1401 aa15.68■□□□□ 0.1
RFX1-204ENST00000588885 ZNF316A6NFI3 1004 aaPredicted RBP15.67■□□□□ 0.1
RFX1-204ENST00000588885 PHKG2P15735 406 aa15.67■□□□□ 0.1
RFX1-204ENST00000588885 IL13P35225 146 aa15.67■□□□□ 0.1
RFX1-204ENST00000588885 NKX1-1Q15270 411 aaPredicted RBP15.67■□□□□ 0.1
RFX1-204ENST00000588885 SULT6B1Q6IMI4 303 aa15.67■□□□□ 0.1
RFX1-204ENST00000588885 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.67■□□□□ 0.1
RFX1-204ENST00000588885 SHANK3Q9BYB0 1731 aa15.67■□□□□ 0.1
RFX1-204ENST00000588885 PLEKHO1Q53GL0 409 aaPredicted RBP15.66■□□□□ 0.1
RFX1-204ENST00000588885 YY1P25490 414 aa15.65■□□□□ 0.1
RFX1-204ENST00000588885 ZNF530Q6P9A1 599 aaPredicted RBP15.65■□□□□ 0.1
RFX1-204ENST00000588885 TUBGCP6Q96RT7 1819 aa15.64■□□□□ 0.09
RFX1-204ENST00000588885 PTGER2P43116 358 aa15.64■□□□□ 0.09
RFX1-204ENST00000588885 TMOD3Q9NYL9 352 aa15.64■□□□□ 0.09
RFX1-204ENST00000588885 PALLDQ8WX93 1383 aa15.63■□□□□ 0.09
RFX1-204ENST00000588885 QSER1Q2KHR3 1735 aa15.63■□□□□ 0.09
RFX1-204ENST00000588885 ANKRD26Q9UPS8 1709 aa15.63■□□□□ 0.09
RFX1-204ENST00000588885 CHD4Q14839 1912 aa15.63■□□□□ 0.09
RFX1-204ENST00000588885 HMOX1P09601 288 aa15.63■□□□□ 0.09
RFX1-204ENST00000588885 MTFR1LQ9H019 292 aa15.63■□□□□ 0.09
RFX1-204ENST00000588885 ASAP1Q9ULH1 1129 aa15.63■□□□□ 0.09
RFX1-204ENST00000588885 PAPPAQ13219 1627 aa15.63■□□□□ 0.09
RFX1-204ENST00000588885 LY75O60449 1722 aa15.63■□□□□ 0.09
RFX1-204ENST00000588885 AMOTQ4VCS5 1084 aa15.62■□□□□ 0.09
RFX1-204ENST00000588885 KLHL34Q8N239 644 aa15.62■□□□□ 0.09
RFX1-204ENST00000588885 SMARCC1Q92922 1105 aaPredicted RBP15.62■□□□□ 0.09
RFX1-204ENST00000588885 PNPLA7Q6ZV29 1317 aa15.62■□□□□ 0.09
RFX1-204ENST00000588885 DIAPH1O60610 1272 aaKnown RBP15.61■□□□□ 0.09
RFX1-204ENST00000588885 ITGB4P16144 1822 aa15.6■□□□□ 0.09
RFX1-204ENST00000588885 NPM3O75607 178 aaKnown RBP15.6■□□□□ 0.09
RFX1-204ENST00000588885 C1orf141Q5JVX7 400 aa15.6■□□□□ 0.09
RFX1-204ENST00000588885 SMIM5Q71RC9 77 aa15.6■□□□□ 0.09
RFX1-204ENST00000588885 CABP4P57796 275 aa15.59■□□□□ 0.09
RFX1-204ENST00000588885 COL23A1Q86Y22 540 aaPredicted RBP15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms