RNA–Protein interactions for RNA: ENST00000588841.1

C19orf53-203, Transcript of chromosome 19 open reading frame 53, humanhuman

TSL 2

Gene C19orf53, Length 499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf53-203ENST00000588841 TATP17735 454 aaPredicted RBP11.25□□□□□ -0.61
C19orf53-203ENST00000588841 RAPGEF4Q8WZA2 1011 aa11.25□□□□□ -0.61
C19orf53-203ENST00000588841 U2SURPO15042 1029 aaKnown RBP11.24□□□□□ -0.61
C19orf53-203ENST00000588841 PDE3BQ13370 1112 aa11.24□□□□□ -0.61
C19orf53-203ENST00000588841 ZCRB1Q8TBF4 217 aaKnown RBP11.24□□□□□ -0.61
C19orf53-203ENST00000588841 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
C19orf53-203ENST00000588841 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.23□□□□□ -0.61
C19orf53-203ENST00000588841 SHANK3Q9BYB0 1731 aa11.23□□□□□ -0.61
C19orf53-203ENST00000588841 BCL9O00512 1426 aa11.22□□□□□ -0.61
C19orf53-203ENST00000588841 CYP27B1O15528 508 aa11.22□□□□□ -0.61
C19orf53-203ENST00000588841 DDX54Q8TDD1 881 aaKnown RBP11.22□□□□□ -0.61
C19orf53-203ENST00000588841 UPF1Q92900 1129 aaKnown RBP eCLIP11.22□□□□□ -0.61
C19orf53-203ENST00000588841 PLEKHG2Q9H7P9 1386 aa11.22□□□□□ -0.61
C19orf53-203ENST00000588841 NUDCQ9Y266 331 aa11.22□□□□□ -0.61
C19orf53-203ENST00000588841 PKD1L3Q7Z443 1732 aa11.21□□□□□ -0.61
C19orf53-203ENST00000588841 EP400Q96L91 3159 aa11.21□□□□□ -0.61
C19orf53-203ENST00000588841 U2AF1L5P0DN76 240 aaPredicted RBP11.21□□□□□ -0.61
C19orf53-203ENST00000588841 U2AF1Q01081 240 aaKnown RBP eCLIP11.21□□□□□ -0.61
C19orf53-203ENST00000588841 FCHSD2O94868 740 aa11.2□□□□□ -0.62
C19orf53-203ENST00000588841 NKX1-1Q15270 411 aaPredicted RBP11.2□□□□□ -0.62
C19orf53-203ENST00000588841 DIEXFQ68CQ4 756 aaKnown RBP11.2□□□□□ -0.62
C19orf53-203ENST00000588841 FAM196AQ6ZSG2 479 aa11.2□□□□□ -0.62
C19orf53-203ENST00000588841 PTF1AQ7RTS3 328 aa11.2□□□□□ -0.62
C19orf53-203ENST00000588841 PHACTR3Q96KR7 559 aa11.2□□□□□ -0.62
C19orf53-203ENST00000588841 PLEKHF1Q96S99 279 aa11.2□□□□□ -0.62
C19orf53-203ENST00000588841 SPG7Q9UQ90 795 aa11.2□□□□□ -0.62
C19orf53-203ENST00000588841 PCDH11XQ9BZA7 1347 aa11.19□□□□□ -0.62
C19orf53-203ENST00000588841 PCDH11YQ9BZA8 1340 aa11.19□□□□□ -0.62
C19orf53-203ENST00000588841 PHKG2P15735 406 aa11.19□□□□□ -0.62
C19orf53-203ENST00000588841 PRKAR2BP31323 418 aa11.19□□□□□ -0.62
C19orf53-203ENST00000588841 MTHFSDQ2M296 383 aaKnown RBP11.19□□□□□ -0.62
C19orf53-203ENST00000588841 AMOTQ4VCS5 1084 aa11.19□□□□□ -0.62
C19orf53-203ENST00000588841 PLEKHO1Q53GL0 409 aaPredicted RBP11.19□□□□□ -0.62
C19orf53-203ENST00000588841 KCNQ2O43526 872 aa11.18□□□□□ -0.62
C19orf53-203ENST00000588841 IFNL2Q8IZJ0 200 aa11.18□□□□□ -0.62
C19orf53-203ENST00000588841 PNISRQ8TF01 805 aaKnown RBP11.18□□□□□ -0.62
C19orf53-203ENST00000588841 ADAMTS8Q9UP79 889 aa11.18□□□□□ -0.62
C19orf53-203ENST00000588841 TRIM37O94972 964 aa11.17□□□□□ -0.62
C19orf53-203ENST00000588841 ZNF530Q6P9A1 599 aaPredicted RBP11.16□□□□□ -0.62
C19orf53-203ENST00000588841 ACSBG1Q96GR2 724 aa11.16□□□□□ -0.62
C19orf53-203ENST00000588841 MRS2Q9HD23 443 aa11.16□□□□□ -0.62
C19orf53-203ENST00000588841 PRIM1P49642 420 aaKnown RBP11.15□□□□□ -0.62
C19orf53-203ENST00000588841 AKAP4Q5JQC9 854 aa11.15□□□□□ -0.62
C19orf53-203ENST00000588841 MIER1Q8N108 512 aa11.15□□□□□ -0.62
C19orf53-203ENST00000588841 BCL11BQ9C0K0 894 aaPredicted RBP11.15□□□□□ -0.62
C19orf53-203ENST00000588841 KDM6AO15550 1401 aaPredicted RBP11.15□□□□□ -0.62
C19orf53-203ENST00000588841 WDR43Q15061 677 aaKnown RBP eCLIP11.14□□□□□ -0.63
C19orf53-203ENST00000588841 CCDC125Q86Z20 511 aa11.14□□□□□ -0.63
C19orf53-203ENST00000588841 LGR6Q9HBX8 967 aa11.14□□□□□ -0.63
C19orf53-203ENST00000588841 TOGARAM1Q9Y4F4 1720 aa11.14□□□□□ -0.63
C19orf53-203ENST00000588841 SBF2Q86WG5 1849 aa11.14□□□□□ -0.63
C19orf53-203ENST00000588841 C1orf141Q5JVX7 400 aa11.13□□□□□ -0.63
C19orf53-203ENST00000588841 MPRIPQ6WCQ1 1025 aa11.13□□□□□ -0.63
C19orf53-203ENST00000588841 CCDC146Q8IYE0 955 aa11.13□□□□□ -0.63
C19orf53-203ENST00000588841 GAS2L2Q8NHY3 880 aa11.13□□□□□ -0.63
C19orf53-203ENST00000588841 DCAF5Q96JK2 942 aa11.13□□□□□ -0.63
C19orf53-203ENST00000588841 TNS1Q9HBL0 1735 aaKnown RBP11.12□□□□□ -0.63
C19orf53-203ENST00000588841 NHSQ6T4R5 1651 aa11.12□□□□□ -0.63
C19orf53-203ENST00000588841 ADAMTS7Q9UKP4 1686 aa11.12□□□□□ -0.63
C19orf53-203ENST00000588841 CCER2I3L3R5 266 aa11.12□□□□□ -0.63
C19orf53-203ENST00000588841 RNMTO43148 476 aaKnown RBP11.12□□□□□ -0.63
C19orf53-203ENST00000588841 HSP90AB1P08238 724 aaKnown RBP11.12□□□□□ -0.63
C19orf53-203ENST00000588841 DEFB132Q7Z7B7 95 aa11.12□□□□□ -0.63
C19orf53-203ENST00000588841 IL17REQ8NFR9 667 aa11.12□□□□□ -0.63
C19orf53-203ENST00000588841 RUNDC1Q96C34 613 aa11.12□□□□□ -0.63
C19orf53-203ENST00000588841 PNNQ9H307 717 aaKnown RBP11.12□□□□□ -0.63
C19orf53-203ENST00000588841 DOT1LQ8TEK3 1739 aa11.12□□□□□ -0.63
C19orf53-203ENST00000588841 GNAT3A8MTJ3 354 aa11.11□□□□□ -0.63
C19orf53-203ENST00000588841 ERVV-2B6SEH9 535 aa11.11□□□□□ -0.63
C19orf53-203ENST00000588841 PLSCR1O15162 318 aa11.11□□□□□ -0.63
C19orf53-203ENST00000588841 APBA3O96018 575 aa11.11□□□□□ -0.63
C19orf53-203ENST00000588841 NFE2L2Q16236 605 aa11.11□□□□□ -0.63
C19orf53-203ENST00000588841 PIGBQ92521 554 aa11.11□□□□□ -0.63
C19orf53-203ENST00000588841 CAMKK2Q96RR4 588 aa11.11□□□□□ -0.63
C19orf53-203ENST00000588841 MAP3K5Q99683 1374 aa11.11□□□□□ -0.63
C19orf53-203ENST00000588841 TMPOP42166 694 aaKnown RBP11.1□□□□□ -0.63
C19orf53-203ENST00000588841 EN1Q05925 392 aaPredicted RBP11.1□□□□□ -0.63
C19orf53-203ENST00000588841 PROM2Q8N271 834 aa11.1□□□□□ -0.63
C19orf53-203ENST00000588841 SYTL4Q96C24 671 aaPredicted RBP11.1□□□□□ -0.63
C19orf53-203ENST00000588841 CEMIPQ8WUJ3 1361 aa11.1□□□□□ -0.63
C19orf53-203ENST00000588841 DCTN1Q14203 1278 aa11.09□□□□□ -0.63
C19orf53-203ENST00000588841 EZH2Q15910 746 aaKnown RBP11.09□□□□□ -0.63
C19orf53-203ENST00000588841 NFATC2IPQ8NCF5 419 aa11.09□□□□□ -0.63
C19orf53-203ENST00000588841 MAPK8IP3Q9UPT6 1336 aa11.09□□□□□ -0.63
C19orf53-203ENST00000588841 MRC1P22897 1456 aa11.08□□□□□ -0.64
C19orf53-203ENST00000588841 APAF1O14727 1248 aa11.08□□□□□ -0.64
C19orf53-203ENST00000588841 HTATSF1O43719 755 aaKnown RBP11.08□□□□□ -0.64
C19orf53-203ENST00000588841 BAG6P46379 1132 aa11.08□□□□□ -0.64
C19orf53-203ENST00000588841 SF3B2Q13435 895 aaKnown RBP11.08□□□□□ -0.64
C19orf53-203ENST00000588841 MCM10Q7L590 875 aa11.08□□□□□ -0.64
C19orf53-203ENST00000588841 SLC52A2Q9HAB3 445 aa11.08□□□□□ -0.64
C19orf53-203ENST00000588841 ATG3Q9NT62 314 aa11.08□□□□□ -0.64
C19orf53-203ENST00000588841 ASAP1Q9ULH1 1129 aa11.08□□□□□ -0.64
C19orf53-203ENST00000588841 TRIM35Q9UPQ4 493 aa11.08□□□□□ -0.64
C19orf53-203ENST00000588841 RRP7AQ9Y3A4 280 aaKnown RBP11.08□□□□□ -0.64
C19orf53-203ENST00000588841 SCN11AQ9UI33 1791 aa11.08□□□□□ -0.64
C19orf53-203ENST00000588841 BTAF1O14981 1849 aa11.07□□□□□ -0.64
C19orf53-203ENST00000588841 ITGB4P16144 1822 aa11.07□□□□□ -0.64
C19orf53-203ENST00000588841 NEFMP07197 916 aa11.07□□□□□ -0.64
C19orf53-203ENST00000588841 RIPK4P57078 832 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 133.8 ms