RNA–Protein interactions for RNA: ENST00000588706.1

TUBD1-209, Transcript of tubulin delta 1, humanhuman

TSL 5

Gene TUBD1, Length 576 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-209ENST00000588706 NSD3Q9BZ95 1437 aa13.46□□□□□ -0.26
TUBD1-209ENST00000588706 SHPRHQ149N8 1683 aa13.45□□□□□ -0.26
TUBD1-209ENST00000588706 CT47B1P0C2W7 299 aaPredicted RBP13.45□□□□□ -0.26
TUBD1-209ENST00000588706 NBPF3Q9H094 633 aa13.45□□□□□ -0.26
TUBD1-209ENST00000588706 RABGEF1Q9UJ41 708 aa13.45□□□□□ -0.26
TUBD1-209ENST00000588706 PLEKHH1Q9ULM0 1364 aa13.45□□□□□ -0.26
TUBD1-209ENST00000588706 PACS2Q86VP3 889 aa13.44□□□□□ -0.26
TUBD1-209ENST00000588706 SPNS2Q8IVW8 549 aa13.44□□□□□ -0.26
TUBD1-209ENST00000588706 EXOC6Q8TAG9 804 aa13.44□□□□□ -0.26
TUBD1-209ENST00000588706 PNNQ9H307 717 aaKnown RBP13.44□□□□□ -0.26
TUBD1-209ENST00000588706 HRO43593 1189 aa13.43□□□□□ -0.26
TUBD1-209ENST00000588706 PDE3AQ14432 1141 aa13.43□□□□□ -0.26
TUBD1-209ENST00000588706 PADI6Q6TGC4 694 aa13.43□□□□□ -0.26
TUBD1-209ENST00000588706 MORC1Q86VD1 984 aa13.43□□□□□ -0.26
TUBD1-209ENST00000588706 WDR63Q8IWG1 891 aa13.43□□□□□ -0.26
TUBD1-209ENST00000588706 DDRGK1Q96HY6 314 aa13.43□□□□□ -0.26
TUBD1-209ENST00000588706 IPO9Q96P70 1041 aaKnown RBP13.43□□□□□ -0.26
TUBD1-209ENST00000588706 KIAA1468Q9P260 1216 aa13.43□□□□□ -0.26
TUBD1-209ENST00000588706 TSKSQ9UJT2 592 aa13.43□□□□□ -0.26
TUBD1-209ENST00000588706 NOP58Q9Y2X3 529 aaKnown RBP13.43□□□□□ -0.26
TUBD1-209ENST00000588706 ZMYM3Q14202 1370 aa13.43□□□□□ -0.26
TUBD1-209ENST00000588706 DIP2BQ9P265 1576 aa13.42□□□□□ -0.26
TUBD1-209ENST00000588706 HIC1Q14526 733 aa13.42□□□□□ -0.26
TUBD1-209ENST00000588706 RUNDC1Q96C34 613 aa13.42□□□□□ -0.26
TUBD1-209ENST00000588706 TULP4Q9NRJ4 1543 aa13.42□□□□□ -0.26
TUBD1-209ENST00000588706 IQSEC2Q5JU85 1478 aa13.42□□□□□ -0.26
TUBD1-209ENST00000588706 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
TUBD1-209ENST00000588706 MRPL50Q8N5N7 158 aaKnown RBP13.4□□□□□ -0.26
TUBD1-209ENST00000588706 CARD14Q9BXL6 1004 aa13.4□□□□□ -0.26
TUBD1-209ENST00000588706 ABCC11Q96J66 1382 aa13.4□□□□□ -0.26
TUBD1-209ENST00000588706 ADGRB2O60241 1585 aa13.4□□□□□ -0.26
TUBD1-209ENST00000588706 NBPF26B4DH59 902 aa13.39□□□□□ -0.27
TUBD1-209ENST00000588706 GNPATO15228 680 aa13.39□□□□□ -0.27
TUBD1-209ENST00000588706 GPR37O15354 613 aa13.39□□□□□ -0.27
TUBD1-209ENST00000588706 TERF2IPQ9NYB0 399 aa13.39□□□□□ -0.27
TUBD1-209ENST00000588706 TRAK1Q9UPV9 953 aa13.39□□□□□ -0.27
TUBD1-209ENST00000588706 MYO5BQ9ULV0 1848 aa13.39□□□□□ -0.27
TUBD1-209ENST00000588706 BHMG1C9JSJ3 638 aaPredicted RBP13.38□□□□□ -0.27
TUBD1-209ENST00000588706 PTPRMP28827 1452 aa13.37□□□□□ -0.27
TUBD1-209ENST00000588706 KIF20BQ96Q89 1820 aa13.37□□□□□ -0.27
TUBD1-209ENST00000588706 CRBNQ96SW2 442 aa13.37□□□□□ -0.27
TUBD1-209ENST00000588706 BACH2Q9BYV9 841 aa13.37□□□□□ -0.27
TUBD1-209ENST00000588706 FAM198AQ9UFP1 575 aa13.37□□□□□ -0.27
TUBD1-209ENST00000588706 SALL2Q9Y467 1007 aaPredicted RBP13.37□□□□□ -0.27
TUBD1-209ENST00000588706 KDM2BQ8NHM5 1336 aa13.37□□□□□ -0.27
TUBD1-209ENST00000588706 ATP7BP35670 1465 aa13.36□□□□□ -0.27
TUBD1-209ENST00000588706 KNDC1Q76NI1 1749 aa13.36□□□□□ -0.27
TUBD1-209ENST00000588706 GOLGA8CPA6NN73 597 aa13.36□□□□□ -0.27
TUBD1-209ENST00000588706 APAF1O14727 1248 aa13.36□□□□□ -0.27
TUBD1-209ENST00000588706 HDGFP51858 240 aaKnown RBP13.36□□□□□ -0.27
TUBD1-209ENST00000588706 TTC13Q8NBP0 860 aa13.36□□□□□ -0.27
TUBD1-209ENST00000588706 MYH16Q9H6N6 1097 aa13.36□□□□□ -0.27
TUBD1-209ENST00000588706 SEPT9Q9UHD8 586 aaPredicted RBP13.36□□□□□ -0.27
TUBD1-209ENST00000588706 PNMA3Q9UL41 463 aa13.36□□□□□ -0.27
TUBD1-209ENST00000588706 YTHDC2Q9H6S0 1430 aaKnown RBP13.36□□□□□ -0.27
TUBD1-209ENST00000588706 VIRMAQ69YN4 1812 aaKnown RBP13.36□□□□□ -0.27
TUBD1-209ENST00000588706 ALKQ9UM73 1620 aa13.35□□□□□ -0.27
TUBD1-209ENST00000588706 IDI1Q13907 227 aa13.35□□□□□ -0.27
TUBD1-209ENST00000588706 CDC42BPGQ6DT37 1551 aa13.35□□□□□ -0.27
TUBD1-209ENST00000588706 ARHGEF40Q8TER5 1519 aa13.34□□□□□ -0.27
TUBD1-209ENST00000588706 YEATS2Q9ULM3 1422 aa13.34□□□□□ -0.27
TUBD1-209ENST00000588706 LAPTM4BQ86VI4 370 aa13.34□□□□□ -0.27
TUBD1-209ENST00000588706 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.34□□□□□ -0.27
TUBD1-209ENST00000588706 TATDN2Q93075 761 aa13.34□□□□□ -0.27
TUBD1-209ENST00000588706 USP35Q9P2H5 1018 aa13.34□□□□□ -0.27
TUBD1-209ENST00000588706 IL16Q14005 1332 aa13.34□□□□□ -0.27
TUBD1-209ENST00000588706 MAPK8IP3Q9UPT6 1336 aa13.34□□□□□ -0.27
TUBD1-209ENST00000588706 RAPGEF3O95398 923 aa13.33□□□□□ -0.28
TUBD1-209ENST00000588706 NUDT18Q6ZVK8 323 aa13.33□□□□□ -0.28
TUBD1-209ENST00000588706 HDGFL2Q7Z4V5 671 aaPredicted RBP13.33□□□□□ -0.28
TUBD1-209ENST00000588706 WWC1Q8IX03 1113 aa13.33□□□□□ -0.28
TUBD1-209ENST00000588706 SIRT1Q96EB6 747 aa13.33□□□□□ -0.28
TUBD1-209ENST00000588706 RIMBP3CA6NJZ7 1639 aa13.32□□□□□ -0.28
TUBD1-209ENST00000588706 RIMBP3BA6NNM3 1639 aa13.32□□□□□ -0.28
TUBD1-209ENST00000588706 RIMBP3Q9UFD9 1639 aa13.32□□□□□ -0.28
TUBD1-209ENST00000588706 SMAPO00193 183 aa13.32□□□□□ -0.28
TUBD1-209ENST00000588706 MMRN1Q13201 1228 aa13.32□□□□□ -0.28
TUBD1-209ENST00000588706 FAM98CQ17RN3 349 aaKnown RBP13.31□□□□□ -0.28
TUBD1-209ENST00000588706 PMFBP1Q8TBY8 1022 aa13.31□□□□□ -0.28
TUBD1-209ENST00000588706 RNF166Q96A37 237 aaPredicted RBP13.31□□□□□ -0.28
TUBD1-209ENST00000588706 ZNF428Q96B54 188 aa13.31□□□□□ -0.28
TUBD1-209ENST00000588706 SLC12A5Q9H2X9 1139 aa13.31□□□□□ -0.28
TUBD1-209ENST00000588706 PLSCR2Q9NRY7 297 aa13.31□□□□□ -0.28
TUBD1-209ENST00000588706 SETD1AO15047 1707 aaKnown RBP13.3□□□□□ -0.28
TUBD1-209ENST00000588706 PPM1GO15355 546 aaPredicted RBP13.3□□□□□ -0.28
TUBD1-209ENST00000588706 FECHP22830 423 aa13.3□□□□□ -0.28
TUBD1-209ENST00000588706 FAM161AQ3B820 660 aa13.3□□□□□ -0.28
TUBD1-209ENST00000588706 MTHFSP49914 203 aa13.29□□□□□ -0.28
TUBD1-209ENST00000588706 ZC3H15Q8WU90 426 aaKnown RBP13.29□□□□□ -0.28
TUBD1-209ENST00000588706 CHMP4BQ9H444 224 aaKnown RBP13.29□□□□□ -0.28
TUBD1-209ENST00000588706 A0A1W2PP64 1363 aa13.29□□□□□ -0.28
TUBD1-209ENST00000588706 FAM135BQ49AJ0 1406 aa13.29□□□□□ -0.28
TUBD1-209ENST00000588706 A2ML1A8K2U0 1454 aa13.29□□□□□ -0.28
TUBD1-209ENST00000588706 NEFMP07197 916 aa13.28□□□□□ -0.28
TUBD1-209ENST00000588706 CANXP27824 592 aaKnown RBP13.28□□□□□ -0.28
TUBD1-209ENST00000588706 CALD1Q05682 793 aaKnown RBP13.28□□□□□ -0.28
TUBD1-209ENST00000588706 RTL5Q5HYW3 569 aaPredicted RBP13.28□□□□□ -0.28
TUBD1-209ENST00000588706 TMEM132EQ6IEE7 984 aa13.28□□□□□ -0.28
TUBD1-209ENST00000588706 CCDC146Q8IYE0 955 aa13.28□□□□□ -0.28
TUBD1-209ENST00000588706 RBM46Q8TBY0 533 aaKnown RBP13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms