RNA–Protein interactions for RNA: ENST00000588454.5

CALR-206, Transcript of calreticulin, humanhuman

TSL 3

Gene CALR, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-206ENST00000588454 LY75O60449 1722 aa15.74■□□□□ 0.11
CALR-206ENST00000588454 GRIN3BO60391 1043 aa15.74■□□□□ 0.11
CALR-206ENST00000588454 SYTL4Q96C24 671 aaPredicted RBP15.74■□□□□ 0.11
CALR-206ENST00000588454 A0A1W2PP64 1363 aa15.74■□□□□ 0.11
CALR-206ENST00000588454 NSD2O96028 1365 aa15.74■□□□□ 0.11
CALR-206ENST00000588454 FAM208AQ9UK61 1670 aaKnown RBP15.73■□□□□ 0.11
CALR-206ENST00000588454 ZCRB1Q8TBF4 217 aaKnown RBP15.73■□□□□ 0.11
CALR-206ENST00000588454 CARD11Q9BXL7 1154 aa15.73■□□□□ 0.11
CALR-206ENST00000588454 SHANK3Q9BYB0 1731 aa15.72■□□□□ 0.11
CALR-206ENST00000588454 YBX3P16989 372 aaKnown RBP eCLIP15.72■□□□□ 0.115e-26■■□□□ 13.1
CALR-206ENST00000588454 IFFO2Q5TF58 517 aa15.72■□□□□ 0.11
CALR-206ENST00000588454 HOXC9P31274 260 aa15.71■□□□□ 0.11
CALR-206ENST00000588454 COL23A1Q86Y22 540 aaPredicted RBP15.71■□□□□ 0.11
CALR-206ENST00000588454 CCNL1Q9UK58 526 aaPredicted RBP15.71■□□□□ 0.11
CALR-206ENST00000588454 MAP3K19Q56UN5 1328 aa15.7■□□□□ 0.1
CALR-206ENST00000588454 DOT1LQ8TEK3 1739 aa15.69■□□□□ 0.1
CALR-206ENST00000588454 COG3Q96JB2 828 aa15.69■□□□□ 0.1
CALR-206ENST00000588454 RGPD2P0DJD1 1756 aa15.68■□□□□ 0.1
CALR-206ENST00000588454 MSH5O43196 834 aa15.68■□□□□ 0.1
CALR-206ENST00000588454 FBLN1P23142 703 aa15.68■□□□□ 0.1
CALR-206ENST00000588454 AMPHP49418 695 aa15.68■□□□□ 0.1
CALR-206ENST00000588454 USP47Q96K76 1375 aa15.67■□□□□ 0.1
CALR-206ENST00000588454 CD2APQ9Y5K6 639 aa15.67■□□□□ 0.1
CALR-206ENST00000588454 MEGF6O75095 1541 aa15.67■□□□□ 0.1
CALR-206ENST00000588454 CGNL1Q0VF96 1302 aa15.67■□□□□ 0.1
CALR-206ENST00000588454 HMGB2P26583 209 aaKnown RBP15.66■□□□□ 0.1
CALR-206ENST00000588454 NBPF6Q5VWK0 638 aa15.66■□□□□ 0.1
CALR-206ENST00000588454 NBPF4Q96M43 638 aa15.66■□□□□ 0.1
CALR-206ENST00000588454 TRIM26Q12899 539 aaPredicted RBP15.65■□□□□ 0.1
CALR-206ENST00000588454 MSL1Q68DK7 614 aa15.65■□□□□ 0.1
CALR-206ENST00000588454 FLAD1Q8NFF5 587 aa15.65■□□□□ 0.1
CALR-206ENST00000588454 TESK2Q96S53 571 aa15.64■□□□□ 0.09
CALR-206ENST00000588454 ATP10DQ9P241 1426 aa15.64■□□□□ 0.09
CALR-206ENST00000588454 RTL1A6NKG5 1358 aa15.62■□□□□ 0.09
CALR-206ENST00000588454 RAPGEF4Q8WZA2 1011 aa15.62■□□□□ 0.09
CALR-206ENST00000588454 GPBP1L1Q9HC44 474 aaPredicted RBP15.62■□□□□ 0.09
CALR-206ENST00000588454 C5P01031 1676 aa15.61■□□□□ 0.09
CALR-206ENST00000588454 SLC24A1O60721 1099 aa15.61■□□□□ 0.09
CALR-206ENST00000588454 TATP17735 454 aaPredicted RBP15.61■□□□□ 0.09
CALR-206ENST00000588454 RRS1Q15050 365 aaKnown RBP15.61■□□□□ 0.09
CALR-206ENST00000588454 USHBP1Q8N6Y0 703 aa15.61■□□□□ 0.09
CALR-206ENST00000588454 TAF1LQ8IZX4 1826 aa15.61■□□□□ 0.09
CALR-206ENST00000588454 ST20-MTHFSA0A0A6YYL1 179 aa15.6■□□□□ 0.09
CALR-206ENST00000588454 FYB1O15117 783 aa15.6■□□□□ 0.09
CALR-206ENST00000588454 ADCY9O60503 1353 aa15.6■□□□□ 0.09
CALR-206ENST00000588454 MPRIPQ6WCQ1 1025 aa15.59■□□□□ 0.09
CALR-206ENST00000588454 PCDH11XQ9BZA7 1347 aa15.59■□□□□ 0.09
CALR-206ENST00000588454 PCDH11YQ9BZA8 1340 aa15.59■□□□□ 0.09
CALR-206ENST00000588454 PALLDQ8WX93 1383 aa15.59■□□□□ 0.09
CALR-206ENST00000588454 HSPA6P17066 643 aa15.58■□□□□ 0.08
CALR-206ENST00000588454 HSP90AB2PQ58FF8 381 aa15.58■□□□□ 0.08
CALR-206ENST00000588454 CYP27B1O15528 508 aa15.57■□□□□ 0.08
CALR-206ENST00000588454 AMIGO3Q86WK7 504 aa15.57■□□□□ 0.08
CALR-206ENST00000588454 SMARCC1Q92922 1105 aaPredicted RBP15.57■□□□□ 0.08
CALR-206ENST00000588454 PCGF6Q9BYE7 350 aa15.57■□□□□ 0.08
CALR-206ENST00000588454 GGNBP2Q9H3C7 697 aa15.57■□□□□ 0.08
CALR-206ENST00000588454 INSRP06213 1382 aa15.57■□□□□ 0.08
CALR-206ENST00000588454 SMG6Q86US8 1419 aaKnown RBP15.57■□□□□ 0.08
CALR-206ENST00000588454 ITGB4P16144 1822 aa15.55■□□□□ 0.08
CALR-206ENST00000588454 C4BP0C0L5 1744 aa15.55■□□□□ 0.08
CALR-206ENST00000588454 ZNF526Q8TF50 670 aaPredicted RBP15.55■□□□□ 0.08
CALR-206ENST00000588454 AK7Q96M32 723 aa15.55■□□□□ 0.08
CALR-206ENST00000588454 UBR3Q6ZT12 1888 aa15.54■□□□□ 0.08
CALR-206ENST00000588454 KIF24Q5T7B8 1368 aa15.54■□□□□ 0.08
CALR-206ENST00000588454 TONSLQ96HA7 1378 aa15.54■□□□□ 0.08
CALR-206ENST00000588454 IGSF1Q8N6C5 1336 aa15.54■□□□□ 0.08
CALR-206ENST00000588454 NKX1-1Q15270 411 aaPredicted RBP15.54■□□□□ 0.08
CALR-206ENST00000588454 PIGBQ92521 554 aa15.54■□□□□ 0.08
CALR-206ENST00000588454 FLT4P35916 1363 aa15.53■□□□□ 0.08
CALR-206ENST00000588454 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.53■□□□□ 0.08
CALR-206ENST00000588454 TOGARAM1Q9Y4F4 1720 aa15.53■□□□□ 0.08
CALR-206ENST00000588454 NSD3Q9BZ95 1437 aa15.52■□□□□ 0.08
CALR-206ENST00000588454 SSFA2P28290 1259 aa15.52■□□□□ 0.08
CALR-206ENST00000588454 SMIM5Q71RC9 77 aa15.52■□□□□ 0.08
CALR-206ENST00000588454 KIF3CO14782 793 aa15.51■□□□□ 0.07
CALR-206ENST00000588454 PHF14O94880 888 aa15.51■□□□□ 0.07
CALR-206ENST00000588454 MAP2P11137 1827 aaKnown RBP15.51■□□□□ 0.07
CALR-206ENST00000588454 LOC102724428A0A0B4J2F2 783 aa15.5■□□□□ 0.07
CALR-206ENST00000588454 SIK1P57059 783 aa15.5■□□□□ 0.07
CALR-206ENST00000588454 LINC00116Q8NCU8 138 aa15.5■□□□□ 0.07
CALR-206ENST00000588454 WWC3Q9ULE0 1092 aa15.5■□□□□ 0.07
CALR-206ENST00000588454 PKD1L3Q7Z443 1732 aa15.49■□□□□ 0.07
CALR-206ENST00000588454 TMF1P82094 1093 aa15.49■□□□□ 0.07
CALR-206ENST00000588454 SPG7Q9UQ90 795 aa15.48■□□□□ 0.07
CALR-206ENST00000588454 EMILIN1Q9Y6C2 1016 aa15.48■□□□□ 0.07
CALR-206ENST00000588454 NCAPD2Q15021 1401 aa15.48■□□□□ 0.07
CALR-206ENST00000588454 ITPK1Q13572 414 aa15.47■□□□□ 0.07
CALR-206ENST00000588454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.47■□□□□ 0.07
CALR-206ENST00000588454 KIF20BQ96Q89 1820 aa15.46■□□□□ 0.07
CALR-206ENST00000588454 TMOD3Q9NYL9 352 aa15.46■□□□□ 0.07
CALR-206ENST00000588454 ASAP1Q9ULH1 1129 aa15.46■□□□□ 0.07
CALR-206ENST00000588454 PCNTO95613 3336 aa15.46■□□□□ 0.06
CALR-206ENST00000588454 CICQ96RK0 1608 aaPredicted RBP15.46■□□□□ 0.06
CALR-206ENST00000588454 GNPATO15228 680 aa15.45■□□□□ 0.06
CALR-206ENST00000588454 MMP10P09238 476 aa15.45■□□□□ 0.06
CALR-206ENST00000588454 ATP6V1AP38606 617 aa15.45■□□□□ 0.06
CALR-206ENST00000588454 APLP1P51693 650 aa15.45■□□□□ 0.06
CALR-206ENST00000588454 CARD14Q9BXL6 1004 aa15.45■□□□□ 0.06
CALR-206ENST00000588454 WASHC2AQ641Q2 1341 aa15.44■□□□□ 0.06
CALR-206ENST00000588454 TGFB2P61812 414 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms