RNA–Protein interactions for RNA: ENST00000588242.2

GCDH-207, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-207ENST00000588242 MEGF6O75095 1541 aa16.92■□□□□ 0.3
GCDH-207ENST00000588242 TATP17735 454 aaPredicted RBP16.92■□□□□ 0.3
GCDH-207ENST00000588242 AEBP1Q8IUX7 1158 aa16.92■□□□□ 0.3
GCDH-207ENST00000588242 PARP4Q9UKK3 1724 aaKnown RBP16.92■□□□□ 0.3
GCDH-207ENST00000588242 KDRP35968 1356 aa16.91■□□□□ 0.3
GCDH-207ENST00000588242 HMOX1P09601 288 aa16.91■□□□□ 0.3
GCDH-207ENST00000588242 U2AF1L5P0DN76 240 aaPredicted RBP16.91■□□□□ 0.3
GCDH-207ENST00000588242 U2AF1Q01081 240 aaKnown RBP eCLIP16.91■□□□□ 0.3
GCDH-207ENST00000588242 WDR43Q15061 677 aaKnown RBP eCLIP16.91■□□□□ 0.3
GCDH-207ENST00000588242 DDB1Q16531 1140 aa16.91■□□□□ 0.3
GCDH-207ENST00000588242 LRRC37A3O60309 1634 aa16.91■□□□□ 0.3
GCDH-207ENST00000588242 OVOS2A0A0G2JMS6 1433 aa16.9■□□□□ 0.3
GCDH-207ENST00000588242 EXOC5O00471 708 aa16.9■□□□□ 0.3
GCDH-207ENST00000588242 TNS2Q63HR2 1409 aa16.89■□□□□ 0.29
GCDH-207ENST00000588242 NEFLP07196 543 aa16.89■□□□□ 0.29
GCDH-207ENST00000588242 PDE3BQ13370 1112 aa16.89■□□□□ 0.29
GCDH-207ENST00000588242 KRT27Q7Z3Y8 459 aa16.88■□□□□ 0.29
GCDH-207ENST00000588242 ZCRB1Q8TBF4 217 aaKnown RBP16.88■□□□□ 0.29
GCDH-207ENST00000588242 BRWD3Q6RI45 1802 aa16.87■□□□□ 0.29
GCDH-207ENST00000588242 PLEKHG2Q9H7P9 1386 aa16.87■□□□□ 0.29
GCDH-207ENST00000588242 RSPH6AQ9H0K4 717 aa16.86■□□□□ 0.29
GCDH-207ENST00000588242 SPG7Q9UQ90 795 aa16.86■□□□□ 0.29
GCDH-207ENST00000588242 FCHSD2O94868 740 aa16.85■□□□□ 0.29
GCDH-207ENST00000588242 PLEKHO1Q53GL0 409 aaPredicted RBP16.85■□□□□ 0.29
GCDH-207ENST00000588242 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.85■□□□□ 0.29
GCDH-207ENST00000588242 PKD1L3Q7Z443 1732 aa16.84■□□□□ 0.29
GCDH-207ENST00000588242 PRKAR2BP31323 418 aa16.84■□□□□ 0.29
GCDH-207ENST00000588242 AMOTQ4VCS5 1084 aa16.84■□□□□ 0.29
GCDH-207ENST00000588242 DDX54Q8TDD1 881 aaKnown RBP16.84■□□□□ 0.29
GCDH-207ENST00000588242 FAM182BQ5T319 152 aa16.83■□□□□ 0.28
GCDH-207ENST00000588242 MARCH10Q8NA82 808 aaPredicted RBP16.83■□□□□ 0.28
GCDH-207ENST00000588242 PCDH11XQ9BZA7 1347 aa16.83■□□□□ 0.28
GCDH-207ENST00000588242 PCDH11YQ9BZA8 1340 aa16.83■□□□□ 0.28
GCDH-207ENST00000588242 PNNQ9H307 717 aaKnown RBP16.82■□□□□ 0.28
GCDH-207ENST00000588242 SHANK3Q9BYB0 1731 aa16.82■□□□□ 0.28
GCDH-207ENST00000588242 NEFMP07197 916 aa16.81■□□□□ 0.28
GCDH-207ENST00000588242 ADAMTS8Q9UP79 889 aa16.81■□□□□ 0.28
GCDH-207ENST00000588242 CYP27B1O15528 508 aa16.8■□□□□ 0.28
GCDH-207ENST00000588242 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
GCDH-207ENST00000588242 FAM196AQ6ZSG2 479 aa16.79■□□□□ 0.28
GCDH-207ENST00000588242 IFNL2Q8IZJ0 200 aa16.79■□□□□ 0.28
GCDH-207ENST00000588242 PHACTR3Q96KR7 559 aa16.79■□□□□ 0.28
GCDH-207ENST00000588242 SUPT16HQ9Y5B9 1047 aaKnown RBP16.79■□□□□ 0.28
GCDH-207ENST00000588242 MAPK8IP3Q9UPT6 1336 aa16.78■□□□□ 0.28
GCDH-207ENST00000588242 PHKG2P15735 406 aa16.78■□□□□ 0.28
GCDH-207ENST00000588242 MTHFSDQ2M296 383 aaKnown RBP16.78■□□□□ 0.28
GCDH-207ENST00000588242 C1orf141Q5JVX7 400 aa16.78■□□□□ 0.28
GCDH-207ENST00000588242 GAS2L2Q8NHY3 880 aa16.78■□□□□ 0.28
GCDH-207ENST00000588242 PLEKHF1Q96S99 279 aa16.78■□□□□ 0.28
GCDH-207ENST00000588242 NGEFQ8N5V2 710 aa16.77■□□□□ 0.28
GCDH-207ENST00000588242 HSP90AB1P08238 724 aaKnown RBP16.76■□□□□ 0.27
GCDH-207ENST00000588242 FKBP8Q14318 412 aa16.76■□□□□ 0.27
GCDH-207ENST00000588242 CCDC146Q8IYE0 955 aa16.76■□□□□ 0.27
GCDH-207ENST00000588242 BCL9O00512 1426 aa16.76■□□□□ 0.27
GCDH-207ENST00000588242 NKX1-1Q15270 411 aaPredicted RBP16.75■□□□□ 0.27
GCDH-207ENST00000588242 AKAP4Q5JQC9 854 aa16.75■□□□□ 0.27
GCDH-207ENST00000588242 RUNDC1Q96C34 613 aa16.75■□□□□ 0.27
GCDH-207ENST00000588242 ACSBG1Q96GR2 724 aa16.73■□□□□ 0.27
GCDH-207ENST00000588242 DCAF5Q96JK2 942 aa16.73■□□□□ 0.27
GCDH-207ENST00000588242 MAP3K5Q99683 1374 aa16.73■□□□□ 0.27
GCDH-207ENST00000588242 GNAT3A8MTJ3 354 aa16.72■□□□□ 0.27
GCDH-207ENST00000588242 TRIM37O94972 964 aa16.72■□□□□ 0.27
GCDH-207ENST00000588242 NFE2L2Q16236 605 aa16.72■□□□□ 0.27
GCDH-207ENST00000588242 DOT1LQ8TEK3 1739 aa16.72■□□□□ 0.27
GCDH-207ENST00000588242 MPRIPQ6WCQ1 1025 aa16.71■□□□□ 0.27
GCDH-207ENST00000588242 SYTL4Q96C24 671 aaPredicted RBP16.71■□□□□ 0.27
GCDH-207ENST00000588242 KDM6AO15550 1401 aaPredicted RBP16.7■□□□□ 0.26
GCDH-207ENST00000588242 KCNQ2O43526 872 aa16.7■□□□□ 0.26
GCDH-207ENST00000588242 PRIM1P49642 420 aaKnown RBP16.7■□□□□ 0.26
GCDH-207ENST00000588242 ERICH6BQ5W0A0 696 aa16.7■□□□□ 0.26
GCDH-207ENST00000588242 SALL2Q9Y467 1007 aaPredicted RBP16.7■□□□□ 0.26
GCDH-207ENST00000588242 NHSQ6T4R5 1651 aa16.69■□□□□ 0.26
GCDH-207ENST00000588242 SBF2Q86WG5 1849 aa16.69■□□□□ 0.26
GCDH-207ENST00000588242 SENP3-EIF4A1A0A087X0R7 540 aa16.69■□□□□ 0.26
GCDH-207ENST00000588242 TMPOP42166 694 aaKnown RBP16.69■□□□□ 0.26
GCDH-207ENST00000588242 RTF1Q92541 710 aaKnown RBP16.69■□□□□ 0.26
GCDH-207ENST00000588242 BCL11BQ9C0K0 894 aaPredicted RBP16.69■□□□□ 0.26
GCDH-207ENST00000588242 TOGARAM1Q9Y4F4 1720 aa16.69■□□□□ 0.26
GCDH-207ENST00000588242 ERVV-2B6SEH9 535 aa16.68■□□□□ 0.26
GCDH-207ENST00000588242 RNMTO43148 476 aaKnown RBP16.68■□□□□ 0.26
GCDH-207ENST00000588242 SF3B2Q13435 895 aaKnown RBP16.68■□□□□ 0.26
GCDH-207ENST00000588242 UPF1Q92900 1129 aaKnown RBP eCLIP16.68■□□□□ 0.26
GCDH-207ENST00000588242 LGR6Q9HBX8 967 aa16.68■□□□□ 0.26
GCDH-207ENST00000588242 RRP7AQ9Y3A4 280 aaKnown RBP16.68■□□□□ 0.26
GCDH-207ENST00000588242 APAF1O14727 1248 aa16.67■□□□□ 0.26
GCDH-207ENST00000588242 HTATSF1O43719 755 aaKnown RBP16.67■□□□□ 0.26
GCDH-207ENST00000588242 RIPK4P57078 832 aa16.67■□□□□ 0.26
GCDH-207ENST00000588242 CABP4P57796 275 aa16.67■□□□□ 0.26
GCDH-207ENST00000588242 NEUROD2Q15784 382 aa16.67■□□□□ 0.26
GCDH-207ENST00000588242 PTF1AQ7RTS3 328 aa16.67■□□□□ 0.26
GCDH-207ENST00000588242 CCDC125Q86Z20 511 aa16.67■□□□□ 0.26
GCDH-207ENST00000588242 TMOD3Q9NYL9 352 aa16.67■□□□□ 0.26
GCDH-207ENST00000588242 EP400Q96L91 3159 aa16.67■□□□□ 0.26
GCDH-207ENST00000588242 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
GCDH-207ENST00000588242 IL17REQ8NFR9 667 aa16.66■□□□□ 0.26
GCDH-207ENST00000588242 SCN11AQ9UI33 1791 aa16.66■□□□□ 0.26
GCDH-207ENST00000588242 ZNF521Q96K83 1311 aa16.66■□□□□ 0.26
GCDH-207ENST00000588242 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
GCDH-207ENST00000588242 TNS1Q9HBL0 1735 aaKnown RBP16.65■□□□□ 0.26
GCDH-207ENST00000588242 APBA3O96018 575 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms