RNA–Protein interactions for RNA: ENST00000587547.1

NEDD4L-218, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4L, Length 889 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4L-218ENST00000587547 ATP7BP35670 1465 aa11.74□□□□□ -0.53
NEDD4L-218ENST00000587547 LRRC37A3O60309 1634 aa11.74□□□□□ -0.53
NEDD4L-218ENST00000587547 C11orf95C9JLR9 678 aaPredicted RBP11.73□□□□□ -0.53
NEDD4L-218ENST00000587547 COL5A2P05997 1499 aaPredicted RBP11.73□□□□□ -0.53
NEDD4L-218ENST00000587547 TESK2Q96S53 571 aa11.73□□□□□ -0.53
NEDD4L-218ENST00000587547 TSPYL2Q9H2G4 693 aaPredicted RBP11.73□□□□□ -0.53
NEDD4L-218ENST00000587547 CPDO75976 1380 aa11.72□□□□□ -0.53
NEDD4L-218ENST00000587547 WASLO00401 505 aaPredicted RBP11.72□□□□□ -0.53
NEDD4L-218ENST00000587547 TXNRD1Q16881 649 aa11.72□□□□□ -0.53
NEDD4L-218ENST00000587547 POLR3GLQ9BT43 218 aa11.72□□□□□ -0.53
NEDD4L-218ENST00000587547 SBNO2Q9Y2G9 1366 aa11.71□□□□□ -0.53
NEDD4L-218ENST00000587547 TMF1P82094 1093 aa11.71□□□□□ -0.53
NEDD4L-218ENST00000587547 GOLGB1Q14789 3259 aaKnown RBP11.7□□□□□ -0.54
NEDD4L-218ENST00000587547 EVC2Q86UK5 1308 aa11.7□□□□□ -0.54
NEDD4L-218ENST00000587547 DDB1Q16531 1140 aa11.7□□□□□ -0.54
NEDD4L-218ENST00000587547 MARCH10Q8NA82 808 aaPredicted RBP11.7□□□□□ -0.54
NEDD4L-218ENST00000587547 TOPAZ1Q8N9V7 1692 aa11.7□□□□□ -0.54
NEDD4L-218ENST00000587547 CRB1P82279 1406 aa11.69□□□□□ -0.54
NEDD4L-218ENST00000587547 USP19O94966 1318 aa11.69□□□□□ -0.54
NEDD4L-218ENST00000587547 SRPK2P78362 688 aaKnown RBP11.69□□□□□ -0.54
NEDD4L-218ENST00000587547 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
NEDD4L-218ENST00000587547 CDK19Q9BWU1 502 aa11.69□□□□□ -0.54
NEDD4L-218ENST00000587547 CABP2Q9NPB3 220 aa11.69□□□□□ -0.54
NEDD4L-218ENST00000587547 PRKAR2AP13861 404 aaKnown RBP11.68□□□□□ -0.54
NEDD4L-218ENST00000587547 NUDT16Q96DE0 195 aaKnown RBP11.68□□□□□ -0.54
NEDD4L-218ENST00000587547 BCL9O00512 1426 aa11.68□□□□□ -0.54
NEDD4L-218ENST00000587547 AATKQ6ZMQ8 1374 aa11.67□□□□□ -0.54
NEDD4L-218ENST00000587547 AKAP12Q02952 1782 aa11.67□□□□□ -0.54
NEDD4L-218ENST00000587547 ZNF316A6NFI3 1004 aaPredicted RBP11.67□□□□□ -0.54
NEDD4L-218ENST00000587547 PRKCSHP14314 528 aaPredicted RBP11.67□□□□□ -0.54
NEDD4L-218ENST00000587547 HSPA6P17066 643 aa11.66□□□□□ -0.54
NEDD4L-218ENST00000587547 ABTB2Q8N961 1025 aa11.66□□□□□ -0.54
NEDD4L-218ENST00000587547 NLGN2Q8NFZ4 835 aa11.66□□□□□ -0.54
NEDD4L-218ENST00000587547 PAPPAQ13219 1627 aa11.66□□□□□ -0.54
NEDD4L-218ENST00000587547 POLR3AO14802 1390 aaPredicted RBP11.66□□□□□ -0.54
NEDD4L-218ENST00000587547 CCDC7Q96M83 1385 aa11.66□□□□□ -0.54
NEDD4L-218ENST00000587547 ACEP12821 1306 aa11.65□□□□□ -0.54
NEDD4L-218ENST00000587547 KIF7Q2M1P5 1343 aa11.65□□□□□ -0.54
NEDD4L-218ENST00000587547 ZBTB7CA1YPR0 619 aa11.65□□□□□ -0.54
NEDD4L-218ENST00000587547 GCP02774 474 aa11.65□□□□□ -0.54
NEDD4L-218ENST00000587547 FXR2P51116 673 aaKnown RBP eCLIP11.65□□□□□ -0.54
NEDD4L-218ENST00000587547 ZNF827Q17R98 1081 aa11.65□□□□□ -0.54
NEDD4L-218ENST00000587547 CDCA8Q53HL2 280 aa11.65□□□□□ -0.54
NEDD4L-218ENST00000587547 ATP10DQ9P241 1426 aa11.65□□□□□ -0.54
NEDD4L-218ENST00000587547 WASHC2AQ641Q2 1341 aa11.64□□□□□ -0.55
NEDD4L-218ENST00000587547 YBX3P16989 372 aaKnown RBP eCLIP11.64□□□□□ -0.55
NEDD4L-218ENST00000587547 TOM1L2Q6ZVM7 507 aa11.64□□□□□ -0.55
NEDD4L-218ENST00000587547 ZNF467Q7Z7K2 595 aaPredicted RBP11.64□□□□□ -0.55
NEDD4L-218ENST00000587547 TMC1Q8TDI8 760 aa11.64□□□□□ -0.55
NEDD4L-218ENST00000587547 MON2Q7Z3U7 1717 aa11.63□□□□□ -0.55
NEDD4L-218ENST00000587547 WNK3Q9BYP7 1800 aa11.63□□□□□ -0.55
NEDD4L-218ENST00000587547 PPIP5K1Q6PFW1 1433 aa11.62□□□□□ -0.55
NEDD4L-218ENST00000587547 RYDENQ9NUL5 291 aaKnown RBP11.62□□□□□ -0.55
NEDD4L-218ENST00000587547 KIF20BQ96Q89 1820 aa11.61□□□□□ -0.55
NEDD4L-218ENST00000587547 AXIN2Q9Y2T1 843 aa11.61□□□□□ -0.55
NEDD4L-218ENST00000587547 CCDC61Q9Y6R9 512 aa11.61□□□□□ -0.55
NEDD4L-218ENST00000587547 NLRP13Q86W25 1043 aa11.6□□□□□ -0.55
NEDD4L-218ENST00000587547 ACSBG1Q96GR2 724 aa11.6□□□□□ -0.55
NEDD4L-218ENST00000587547 PUS7Q96PZ0 661 aaKnown RBP11.6□□□□□ -0.55
NEDD4L-218ENST00000587547 GPBP1L1Q9HC44 474 aaPredicted RBP11.6□□□□□ -0.55
NEDD4L-218ENST00000587547 LRRC4BQ9NT99 713 aa11.6□□□□□ -0.55
NEDD4L-218ENST00000587547 CABP1Q9NZU7 370 aa11.6□□□□□ -0.55
NEDD4L-218ENST00000587547 PCDHB8Q9UN66 801 aa11.6□□□□□ -0.55
NEDD4L-218ENST00000587547 PCDHB13Q9Y5F0 798 aa11.6□□□□□ -0.55
NEDD4L-218ENST00000587547 WDR17Q8IZU2 1322 aa11.6□□□□□ -0.55
NEDD4L-218ENST00000587547 PLEKHG3A1L390 1219 aa11.59□□□□□ -0.55
NEDD4L-218ENST00000587547 ZNF526Q8TF50 670 aaPredicted RBP11.59□□□□□ -0.55
NEDD4L-218ENST00000587547 CDCA7Q9BWT1 371 aaPredicted RBP11.59□□□□□ -0.55
NEDD4L-218ENST00000587547 SLC12A5Q9H2X9 1139 aa11.59□□□□□ -0.55
NEDD4L-218ENST00000587547 NHSQ6T4R5 1651 aa11.59□□□□□ -0.55
NEDD4L-218ENST00000587547 ADCY9O60503 1353 aa11.58□□□□□ -0.56
NEDD4L-218ENST00000587547 GRIN3BO60391 1043 aa11.58□□□□□ -0.56
NEDD4L-218ENST00000587547 POLD1P28340 1107 aa11.58□□□□□ -0.56
NEDD4L-218ENST00000587547 PDAP1Q13442 181 aaKnown RBP11.58□□□□□ -0.56
NEDD4L-218ENST00000587547 COL18A1P39060 1754 aa11.58□□□□□ -0.56
NEDD4L-218ENST00000587547 SLIT3O75094 1523 aa11.57□□□□□ -0.56
NEDD4L-218ENST00000587547 DDX10Q13206 875 aaKnown RBP11.57□□□□□ -0.56
NEDD4L-218ENST00000587547 TNS2Q63HR2 1409 aa11.57□□□□□ -0.56
NEDD4L-218ENST00000587547 COL24A1Q17RW2 1714 aa11.57□□□□□ -0.56
NEDD4L-218ENST00000587547 PNPLA7Q6ZV29 1317 aa11.57□□□□□ -0.56
NEDD4L-218ENST00000587547 A0A1W2PP64 1363 aa11.56□□□□□ -0.56
NEDD4L-218ENST00000587547 TPRNQ4KMQ1 711 aa11.56□□□□□ -0.56
NEDD4L-218ENST00000587547 HDGFL2Q7Z4V5 671 aaPredicted RBP11.56□□□□□ -0.56
NEDD4L-218ENST00000587547 SLC16A10Q8TF71 515 aa11.56□□□□□ -0.56
NEDD4L-218ENST00000587547 TERF2IPQ9NYB0 399 aa11.56□□□□□ -0.56
NEDD4L-218ENST00000587547 CD163L1Q9NR16 1453 aa11.56□□□□□ -0.56
NEDD4L-218ENST00000587547 BRD4O60885 1362 aaPredicted RBP11.55□□□□□ -0.56
NEDD4L-218ENST00000587547 ANKRD26Q9UPS8 1709 aa11.55□□□□□ -0.56
NEDD4L-218ENST00000587547 USP6P35125 1406 aa11.55□□□□□ -0.56
NEDD4L-218ENST00000587547 CPSF1Q10570 1443 aaKnown RBP11.55□□□□□ -0.56
NEDD4L-218ENST00000587547 EXOC5O00471 708 aa11.55□□□□□ -0.56
NEDD4L-218ENST00000587547 NLRP6P59044 892 aa11.55□□□□□ -0.56
NEDD4L-218ENST00000587547 NBR1Q14596 966 aa11.55□□□□□ -0.56
NEDD4L-218ENST00000587547 CARD10Q9BWT7 1032 aa11.55□□□□□ -0.56
NEDD4L-218ENST00000587547 PANK3Q9H999 370 aa11.55□□□□□ -0.56
NEDD4L-218ENST00000587547 KTN1Q86UP2 1357 aaKnown RBP11.54□□□□□ -0.56
NEDD4L-218ENST00000587547 ANKRD36BQ8N2N9 1353 aa11.54□□□□□ -0.56
NEDD4L-218ENST00000587547 BTAF1O14981 1849 aa11.54□□□□□ -0.56
NEDD4L-218ENST00000587547 COL13A1Q5TAT6 717 aaPredicted RBP11.54□□□□□ -0.56
NEDD4L-218ENST00000587547 CHRDL2Q6WN34 429 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms