RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 SHANK3Q9BYB0 1731 aa20.83■□□□□ 0.92
LRFN3-203ENST00000587257 NSD2O96028 1365 aa20.83■□□□□ 0.92
LRFN3-203ENST00000587257 FAM208AQ9UK61 1670 aaKnown RBP20.83■□□□□ 0.92
LRFN3-203ENST00000587257 GOLGB1Q14789 3259 aaKnown RBP20.81■□□□□ 0.92
LRFN3-203ENST00000587257 MSH5O43196 834 aa20.81■□□□□ 0.92
LRFN3-203ENST00000587257 YBX3P16989 372 aaKnown RBP eCLIP20.81■□□□□ 0.92
LRFN3-203ENST00000587257 CARD11Q9BXL7 1154 aa20.81■□□□□ 0.92
LRFN3-203ENST00000587257 DOT1LQ8TEK3 1739 aa20.79■□□□□ 0.92
LRFN3-203ENST00000587257 ZCRB1Q8TBF4 217 aaKnown RBP20.79■□□□□ 0.92
LRFN3-203ENST00000587257 USP47Q96K76 1375 aa20.79■□□□□ 0.92
LRFN3-203ENST00000587257 MAP3K19Q56UN5 1328 aa20.78■□□□□ 0.92
LRFN3-203ENST00000587257 TUBGCP6Q96RT7 1819 aa20.78■□□□□ 0.92
LRFN3-203ENST00000587257 MEGF6O75095 1541 aa20.78■□□□□ 0.92
LRFN3-203ENST00000587257 HOXC9P31274 260 aa20.77■□□□□ 0.92
LRFN3-203ENST00000587257 AMPHP49418 695 aa20.77■□□□□ 0.92
LRFN3-203ENST00000587257 COL23A1Q86Y22 540 aaPredicted RBP20.77■□□□□ 0.92
LRFN3-203ENST00000587257 COG3Q96JB2 828 aa20.77■□□□□ 0.92
LRFN3-203ENST00000587257 LY75O60449 1722 aa20.77■□□□□ 0.92
LRFN3-203ENST00000587257 ATP10DQ9P241 1426 aa20.77■□□□□ 0.91
LRFN3-203ENST00000587257 MSL1Q68DK7 614 aa20.76■□□□□ 0.91
LRFN3-203ENST00000587257 PUS7Q96PZ0 661 aaKnown RBP20.76■□□□□ 0.91
LRFN3-203ENST00000587257 KAT6BQ8WYB5 2073 aa20.74■□□□□ 0.91
LRFN3-203ENST00000587257 HMGB2P26583 209 aaKnown RBP20.73■□□□□ 0.91
LRFN3-203ENST00000587257 CD2APQ9Y5K6 639 aa20.73■□□□□ 0.91
LRFN3-203ENST00000587257 CGNL1Q0VF96 1302 aa20.73■□□□□ 0.91
LRFN3-203ENST00000587257 RTL1A6NKG5 1358 aa20.72■□□□□ 0.91
LRFN3-203ENST00000587257 GPBP1L1Q9HC44 474 aaPredicted RBP20.72■□□□□ 0.91
LRFN3-203ENST00000587257 CEP350Q5VT06 3117 aa20.71■□□□□ 0.91
LRFN3-203ENST00000587257 FLAD1Q8NFF5 587 aa20.7■□□□□ 0.9
LRFN3-203ENST00000587257 RAPGEF4Q8WZA2 1011 aa20.7■□□□□ 0.9
LRFN3-203ENST00000587257 SMG6Q86US8 1419 aaKnown RBP20.7■□□□□ 0.9
LRFN3-203ENST00000587257 FBLN1P23142 703 aa20.68■□□□□ 0.9
LRFN3-203ENST00000587257 NBPF6Q5VWK0 638 aa20.68■□□□□ 0.9
LRFN3-203ENST00000587257 NBPF4Q96M43 638 aa20.68■□□□□ 0.9
LRFN3-203ENST00000587257 ADCY9O60503 1353 aa20.68■□□□□ 0.9
LRFN3-203ENST00000587257 PALLDQ8WX93 1383 aa20.68■□□□□ 0.9
LRFN3-203ENST00000587257 RRS1Q15050 365 aaKnown RBP20.66■□□□□ 0.9
LRFN3-203ENST00000587257 USHBP1Q8N6Y0 703 aa20.66■□□□□ 0.9
LRFN3-203ENST00000587257 PCDH11XQ9BZA7 1347 aa20.66■□□□□ 0.9
LRFN3-203ENST00000587257 PCDH11YQ9BZA8 1340 aa20.66■□□□□ 0.9
LRFN3-203ENST00000587257 C5P01031 1676 aa20.65■□□□□ 0.9
LRFN3-203ENST00000587257 TATP17735 454 aaPredicted RBP20.65■□□□□ 0.9
LRFN3-203ENST00000587257 ZNF526Q8TF50 670 aaPredicted RBP20.65■□□□□ 0.9
LRFN3-203ENST00000587257 HSPA6P17066 643 aa20.64■□□□□ 0.89
LRFN3-203ENST00000587257 MPRIPQ6WCQ1 1025 aa20.63■□□□□ 0.89
LRFN3-203ENST00000587257 AK7Q96M32 723 aa20.63■□□□□ 0.89
LRFN3-203ENST00000587257 TESK2Q96S53 571 aa20.63■□□□□ 0.89
LRFN3-203ENST00000587257 SLC24A1O60721 1099 aa20.62■□□□□ 0.89
LRFN3-203ENST00000587257 RGPD2P0DJD1 1756 aa20.62■□□□□ 0.89
LRFN3-203ENST00000587257 NSD3Q9BZ95 1437 aa20.61■□□□□ 0.89
LRFN3-203ENST00000587257 TONSLQ96HA7 1378 aa20.61■□□□□ 0.89
LRFN3-203ENST00000587257 IGSF1Q8N6C5 1336 aa20.61■□□□□ 0.89
LRFN3-203ENST00000587257 SMARCC1Q92922 1105 aaPredicted RBP20.61■□□□□ 0.89
LRFN3-203ENST00000587257 INSRP06213 1382 aa20.59■□□□□ 0.89
LRFN3-203ENST00000587257 ST20-MTHFSA0A0A6YYL1 179 aa20.59■□□□□ 0.89
LRFN3-203ENST00000587257 PHF14O94880 888 aa20.59■□□□□ 0.89
LRFN3-203ENST00000587257 GGNBP2Q9H3C7 697 aa20.59■□□□□ 0.89
LRFN3-203ENST00000587257 C4BP0C0L5 1744 aa20.58■□□□□ 0.89
LRFN3-203ENST00000587257 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.58■□□□□ 0.89
LRFN3-203ENST00000587257 FYB1O15117 783 aa20.58■□□□□ 0.89
LRFN3-203ENST00000587257 WWC3Q9ULE0 1092 aa20.58■□□□□ 0.89
LRFN3-203ENST00000587257 FLT4P35916 1363 aa20.58■□□□□ 0.88
LRFN3-203ENST00000587257 CYP27B1O15528 508 aa20.57■□□□□ 0.88
LRFN3-203ENST00000587257 HSP90AB2PQ58FF8 381 aa20.57■□□□□ 0.88
LRFN3-203ENST00000587257 AMIGO3Q86WK7 504 aa20.57■□□□□ 0.88
LRFN3-203ENST00000587257 KIF24Q5T7B8 1368 aa20.57■□□□□ 0.88
LRFN3-203ENST00000587257 SSFA2P28290 1259 aa20.56■□□□□ 0.88
LRFN3-203ENST00000587257 TOGARAM1Q9Y4F4 1720 aa20.54■□□□□ 0.88
LRFN3-203ENST00000587257 TAF1LQ8IZX4 1826 aa20.53■□□□□ 0.88
LRFN3-203ENST00000587257 PIGBQ92521 554 aa20.53■□□□□ 0.88
LRFN3-203ENST00000587257 LOC102724428A0A0B4J2F2 783 aa20.52■□□□□ 0.88
LRFN3-203ENST00000587257 KIF3CO14782 793 aa20.52■□□□□ 0.88
LRFN3-203ENST00000587257 SIK1P57059 783 aa20.52■□□□□ 0.88
LRFN3-203ENST00000587257 SMIM5Q71RC9 77 aa20.52■□□□□ 0.88
LRFN3-203ENST00000587257 GNPATO15228 680 aa20.5■□□□□ 0.87
LRFN3-203ENST00000587257 TMF1P82094 1093 aa20.5■□□□□ 0.87
LRFN3-203ENST00000587257 NKX1-1Q15270 411 aaPredicted RBP20.5■□□□□ 0.87
LRFN3-203ENST00000587257 LINC00116Q8NCU8 138 aa20.5■□□□□ 0.87
LRFN3-203ENST00000587257 CICQ96RK0 1608 aaPredicted RBP20.49■□□□□ 0.87
LRFN3-203ENST00000587257 SPG7Q9UQ90 795 aa20.49■□□□□ 0.87
LRFN3-203ENST00000587257 UBR3Q6ZT12 1888 aa20.48■□□□□ 0.87
LRFN3-203ENST00000587257 PKD1L3Q7Z443 1732 aa20.48■□□□□ 0.87
LRFN3-203ENST00000587257 TMOD3Q9NYL9 352 aa20.48■□□□□ 0.87
LRFN3-203ENST00000587257 NCAPD2Q15021 1401 aa20.47■□□□□ 0.87
LRFN3-203ENST00000587257 MMP10P09238 476 aa20.47■□□□□ 0.87
LRFN3-203ENST00000587257 APLP1P51693 650 aa20.47■□□□□ 0.87
LRFN3-203ENST00000587257 PXDNLA1KZ92 1463 aa20.46■□□□□ 0.87
LRFN3-203ENST00000587257 EMILIN1Q9Y6C2 1016 aa20.46■□□□□ 0.87
LRFN3-203ENST00000587257 ITPK1Q13572 414 aa20.45■□□□□ 0.86
LRFN3-203ENST00000587257 ITGB4P16144 1822 aa20.44■□□□□ 0.86
LRFN3-203ENST00000587257 PPM1GO15355 546 aaPredicted RBP20.44■□□□□ 0.86
LRFN3-203ENST00000587257 TOMM70O94826 608 aa20.44■□□□□ 0.86
LRFN3-203ENST00000587257 ATP6V1AP38606 617 aa20.44■□□□□ 0.86
LRFN3-203ENST00000587257 CDCA8Q53HL2 280 aa20.44■□□□□ 0.86
LRFN3-203ENST00000587257 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.44■□□□□ 0.86
LRFN3-203ENST00000587257 ASAP1Q9ULH1 1129 aa20.44■□□□□ 0.86
LRFN3-203ENST00000587257 KIF20BQ96Q89 1820 aa20.43■□□□□ 0.86
LRFN3-203ENST00000587257 TGFB2P61812 414 aa20.43■□□□□ 0.86
LRFN3-203ENST00000587257 MAP2P11137 1827 aaKnown RBP20.43■□□□□ 0.86
LRFN3-203ENST00000587257 BCS1LQ9Y276 419 aa20.42■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms