RNA–Protein interactions for RNA: ENST00000586792.5

ZNF540-204, Transcript of zinc finger protein 540, humanhuman

TSL 3 BASIC

Gene ZNF540, Length 564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF540-204ENST00000586792 H7C1W4 665 aa9.48□□□□□ -0.89
ZNF540-204ENST00000586792 RNF144AP50876 292 aaPredicted RBP9.48□□□□□ -0.89
ZNF540-204ENST00000586792 PRICKLE2Q7Z3G6 844 aa9.48□□□□□ -0.89
ZNF540-204ENST00000586792 K7ELQ4 463 aaPredicted RBP9.47□□□□□ -0.89
ZNF540-204ENST00000586792 ITGB2P05107 769 aa9.47□□□□□ -0.89
ZNF540-204ENST00000586792 PNMA1Q8ND90 353 aa9.47□□□□□ -0.89
ZNF540-204ENST00000586792 ADAM32Q8TC27 787 aa9.47□□□□□ -0.89
ZNF540-204ENST00000586792 TRERF1Q96PN7 1200 aa9.47□□□□□ -0.89
ZNF540-204ENST00000586792 LILRA1O75019 489 aa9.46□□□□□ -0.9
ZNF540-204ENST00000586792 ADD1P35611 737 aaKnown RBP9.46□□□□□ -0.9
ZNF540-204ENST00000586792 ERVH48-1M5A8F1 160 aa9.45□□□□□ -0.9
ZNF540-204ENST00000586792 RAB15P59190 212 aa9.45□□□□□ -0.9
ZNF540-204ENST00000586792 RIPOR1Q6ZS17 1223 aa9.45□□□□□ -0.9
ZNF540-204ENST00000586792 ALYREFQ86V81 257 aaKnown RBP9.45□□□□□ -0.9
ZNF540-204ENST00000586792 DZIP3Q86Y13 1208 aaKnown RBP9.45□□□□□ -0.9
ZNF540-204ENST00000586792 KDF1Q8NAX2 398 aaPredicted RBP9.45□□□□□ -0.9
ZNF540-204ENST00000586792 LRRN4Q8WUT4 740 aa9.45□□□□□ -0.9
ZNF540-204ENST00000586792 GPR25O00155 361 aa9.44□□□□□ -0.9
ZNF540-204ENST00000586792 GPC1P35052 558 aa9.44□□□□□ -0.9
ZNF540-204ENST00000586792 PDE4DQ08499 809 aa9.44□□□□□ -0.9
ZNF540-204ENST00000586792 NR6A1Q15406 480 aa9.44□□□□□ -0.9
ZNF540-204ENST00000586792 DBN1Q16643 649 aa9.44□□□□□ -0.9
ZNF540-204ENST00000586792 PPP2R2DQ66LE6 453 aa9.44□□□□□ -0.9
ZNF540-204ENST00000586792 ACDQ96AP0 544 aa9.44□□□□□ -0.9
ZNF540-204ENST00000586792 OCSTAMPQ9BR26 566 aa9.44□□□□□ -0.9
ZNF540-204ENST00000586792 POLR3EQ9NVU0 708 aa9.44□□□□□ -0.9
ZNF540-204ENST00000586792 RHOQP17081 205 aa9.43□□□□□ -0.9
ZNF540-204ENST00000586792 DYRK1BQ9Y463 629 aa9.43□□□□□ -0.9
ZNF540-204ENST00000586792 MX2P20592 715 aa9.42□□□□□ -0.9
ZNF540-204ENST00000586792 SEPT12Q8IYM1 358 aa9.42□□□□□ -0.9
ZNF540-204ENST00000586792 GTPBP3Q969Y2 492 aaKnown RBP9.41□□□□□ -0.9
ZNF540-204ENST00000586792 ESPNB1AK53 854 aa9.4□□□□□ -0.9
ZNF540-204ENST00000586792 OIP5O43482 229 aa9.4□□□□□ -0.9
ZNF540-204ENST00000586792 BAG6P46379 1132 aa9.4□□□□□ -0.9
ZNF540-204ENST00000586792 ATP5J2-PTCD1G3V325 749 aa9.39□□□□□ -0.91
ZNF540-204ENST00000586792 GAS2L1Q99501 681 aaPredicted RBP9.39□□□□□ -0.91
ZNF540-204ENST00000586792 MKL2Q9ULH7 1088 aa9.39□□□□□ -0.91
ZNF540-204ENST00000586792 MAP2K3P46734 347 aa9.38□□□□□ -0.91
ZNF540-204ENST00000586792 Q8N3U1 123 aa9.38□□□□□ -0.91
ZNF540-204ENST00000586792 KRTAP4-8Q9BYQ9 185 aa9.38□□□□□ -0.91
ZNF540-204ENST00000586792 CYLDQ9NQC7 956 aa9.38□□□□□ -0.91
ZNF540-204ENST00000586792 CCDC125Q86Z20 511 aa9.37□□□□□ -0.91
ZNF540-204ENST00000586792 MEN1O00255 615 aa9.36□□□□□ -0.91
ZNF540-204ENST00000586792 SLC27A3Q5K4L6 730 aa9.36□□□□□ -0.91
ZNF540-204ENST00000586792 OXCT2Q9BYC2 517 aaPredicted RBP9.36□□□□□ -0.91
ZNF540-204ENST00000586792 KRBA1A5PL33 1030 aa9.35□□□□□ -0.91
ZNF540-204ENST00000586792 WDR44Q5JSH3 913 aa9.35□□□□□ -0.91
ZNF540-204ENST00000586792 NLRP3Q96P20 1036 aa9.35□□□□□ -0.91
ZNF540-204ENST00000586792 POU4F2Q12837 409 aa9.34□□□□□ -0.91
ZNF540-204ENST00000586792 NUCKS1Q9H1E3 243 aaKnown RBP9.34□□□□□ -0.91
ZNF540-204ENST00000586792 A0A1W2PRU2 124 aa9.33□□□□□ -0.92
ZNF540-204ENST00000586792 PIK3R2O00459 728 aa9.33□□□□□ -0.92
ZNF540-204ENST00000586792 SNRPNP63162 240 aaKnown RBP9.33□□□□□ -0.92
ZNF540-204ENST00000586792 SKIV2LQ15477 1246 aaKnown RBP9.33□□□□□ -0.92
ZNF540-204ENST00000586792 CFHR5Q9BXR6 569 aa9.33□□□□□ -0.92
ZNF540-204ENST00000586792 FURINP09958 794 aa9.32□□□□□ -0.92
ZNF540-204ENST00000586792 NBPF10Q6P3W6 841 aaKnown RBP9.32□□□□□ -0.92
ZNF540-204ENST00000586792 NBPF15Q8N660 670 aa9.32□□□□□ -0.92
ZNF540-204ENST00000586792 PSMG3-AS1Q96PY0 264 aa9.32□□□□□ -0.92
ZNF540-204ENST00000586792 GDF2Q9UK05 429 aaPredicted RBP9.32□□□□□ -0.92
ZNF540-204ENST00000586792 ATP1B4Q9UN42 357 aaPredicted RBP9.32□□□□□ -0.92
ZNF540-204ENST00000586792 AP1G2O75843 785 aa9.31□□□□□ -0.92
ZNF540-204ENST00000586792 F11P03951 625 aa9.31□□□□□ -0.92
ZNF540-204ENST00000586792 GRIP2Q9C0E4 1043 aa9.31□□□□□ -0.92
ZNF540-204ENST00000586792 RRAGCQ9HB90 399 aa9.31□□□□□ -0.92
ZNF540-204ENST00000586792 PHF24Q9UPV7 400 aa9.31□□□□□ -0.92
ZNF540-204ENST00000586792 SPATA31C2B4DYI2 1134 aa9.3□□□□□ -0.92
ZNF540-204ENST00000586792 TIMMDC1Q9NPL8 285 aa9.3□□□□□ -0.92
ZNF540-204ENST00000586792 TAS1R3Q7RTX0 852 aa9.29□□□□□ -0.92
ZNF540-204ENST00000586792 RB1CC1Q8TDY2 1594 aa9.29□□□□□ -0.92
ZNF540-204ENST00000586792 CC2D2BQ6DHV5 1058 aa9.28□□□□□ -0.92
ZNF540-204ENST00000586792 EPS8L1Q8TE68 723 aa9.28□□□□□ -0.92
ZNF540-204ENST00000586792 EDARADDQ8WWZ3 215 aa9.28□□□□□ -0.92
ZNF540-204ENST00000586792 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.28□□□□□ -0.92
ZNF540-204ENST00000586792 SHISA8B8ZZ34 492 aa9.27□□□□□ -0.93
ZNF540-204ENST00000586792 COL8A1P27658 744 aa9.27□□□□□ -0.93
ZNF540-204ENST00000586792 ERVK-9P63128 1117 aa9.27□□□□□ -0.93
ZNF540-204ENST00000586792 CLN3Q13286 438 aa9.27□□□□□ -0.93
ZNF540-204ENST00000586792 RNF20Q5VTR2 975 aa9.27□□□□□ -0.93
ZNF540-204ENST00000586792 CYP2U1Q7Z449 544 aa9.27□□□□□ -0.93
ZNF540-204ENST00000586792 GOLGA6L1Q8N7Z2 621 aa9.27□□□□□ -0.93
ZNF540-204ENST00000586792 KLRG1Q96E93 195 aa9.27□□□□□ -0.93
ZNF540-204ENST00000586792 WASLO00401 505 aaPredicted RBP9.26□□□□□ -0.93
ZNF540-204ENST00000586792 SLC24A1O60721 1099 aa9.26□□□□□ -0.93
ZNF540-204ENST00000586792 SH3D19Q5HYK7 790 aa9.26□□□□□ -0.93
ZNF540-204ENST00000586792 GIGYF1O75420 1035 aaPredicted RBP9.25□□□□□ -0.93
ZNF540-204ENST00000586792 GRIN2CQ14957 1233 aa9.25□□□□□ -0.93
ZNF540-204ENST00000586792 ESF1Q9H501 851 aaKnown RBP9.25□□□□□ -0.93
ZNF540-204ENST00000586792 PROCA1Q8NCQ7 364 aaPredicted RBP9.24□□□□□ -0.93
ZNF540-204ENST00000586792 SLC24A3Q9HC58 644 aa9.24□□□□□ -0.93
ZNF540-204ENST00000586792 NACADO15069 1562 aa9.24□□□□□ -0.93
ZNF540-204ENST00000586792 USP17L8P0C7I0 530 aa9.23□□□□□ -0.93
ZNF540-204ENST00000586792 AMPD1P23109 780 aa9.23□□□□□ -0.93
ZNF540-204ENST00000586792 LBRQ14739 615 aaKnown RBP9.23□□□□□ -0.93
ZNF540-204ENST00000586792 FBXO31Q5XUX0 539 aaPredicted RBP9.23□□□□□ -0.93
ZNF540-204ENST00000586792 HMX1Q9NP08 348 aaPredicted RBP9.23□□□□□ -0.93
ZNF540-204ENST00000586792 PCDHB9Q9Y5E1 797 aa9.23□□□□□ -0.93
ZNF540-204ENST00000586792 ZBBXA8MT70 800 aa9.22□□□□□ -0.93
ZNF540-204ENST00000586792 GNB5O14775 395 aa9.22□□□□□ -0.93
ZNF540-204ENST00000586792 MCCD1P59942 119 aaPredicted RBP9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms