RNA–Protein interactions for RNA: ENST00000586760.1

CALR-202, Transcript of calreticulin, humanhuman

TSL 2

Gene CALR, Length 913 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALR-202ENST00000586760 CCNL1Q9UK58 526 aaPredicted RBP16.45■□□□□ 0.22
CALR-202ENST00000586760 SBF2Q86WG5 1849 aa16.45■□□□□ 0.22
CALR-202ENST00000586760 USP54Q70EL1 1684 aa16.43■□□□□ 0.22
CALR-202ENST00000586760 MSH5O43196 834 aa16.43■□□□□ 0.22
CALR-202ENST00000586760 GPR162Q16538 588 aa16.43■□□□□ 0.22
CALR-202ENST00000586760 HSP90AB2PQ58FF8 381 aa16.43■□□□□ 0.22
CALR-202ENST00000586760 USHBP1Q8N6Y0 703 aa16.43■□□□□ 0.22
CALR-202ENST00000586760 RGPD5Q99666 1765 aa16.43■□□□□ 0.22
CALR-202ENST00000586760 INSRP06213 1382 aa16.42■□□□□ 0.22
CALR-202ENST00000586760 KIF24Q5T7B8 1368 aa16.42■□□□□ 0.22
CALR-202ENST00000586760 MAP3K5Q99683 1374 aa16.41■□□□□ 0.22
CALR-202ENST00000586760 KCNQ4P56696 695 aa16.41■□□□□ 0.22
CALR-202ENST00000586760 KLHL34Q8N239 644 aa16.41■□□□□ 0.22
CALR-202ENST00000586760 PNPLA7Q6ZV29 1317 aa16.41■□□□□ 0.22
CALR-202ENST00000586760 PCDH11XQ9BZA7 1347 aa16.41■□□□□ 0.22
CALR-202ENST00000586760 PCDH11YQ9BZA8 1340 aa16.41■□□□□ 0.22
CALR-202ENST00000586760 WNK3Q9BYP7 1800 aa16.4■□□□□ 0.22
CALR-202ENST00000586760 NHSQ6T4R5 1651 aa16.4■□□□□ 0.22
CALR-202ENST00000586760 FLT4P35916 1363 aa16.4■□□□□ 0.22
CALR-202ENST00000586760 PPM1GO15355 546 aaPredicted RBP16.4■□□□□ 0.22
CALR-202ENST00000586760 FLAD1Q8NFF5 587 aa16.4■□□□□ 0.22
CALR-202ENST00000586760 CASZ1Q86V15 1759 aa16.39■□□□□ 0.21
CALR-202ENST00000586760 SMARCC1Q92922 1105 aaPredicted RBP16.39■□□□□ 0.21
CALR-202ENST00000586760 ZNF784Q8NCA9 323 aaPredicted RBP16.38■□□□□ 0.21
CALR-202ENST00000586760 CARD14Q9BXL6 1004 aa16.38■□□□□ 0.21
CALR-202ENST00000586760 SPG7Q9UQ90 795 aa16.38■□□□□ 0.21
CALR-202ENST00000586760 MPRIPQ6WCQ1 1025 aa16.37■□□□□ 0.21
CALR-202ENST00000586760 CLSPNQ9HAW4 1339 aa16.37■□□□□ 0.21
CALR-202ENST00000586760 LTN1O94822 1766 aa16.36■□□□□ 0.21
CALR-202ENST00000586760 MEGF6O75095 1541 aa16.36■□□□□ 0.21
CALR-202ENST00000586760 PELP1Q8IZL8 1130 aaKnown RBP16.36■□□□□ 0.21
CALR-202ENST00000586760 COL23A1Q86Y22 540 aaPredicted RBP16.35■□□□□ 0.21
CALR-202ENST00000586760 EMILIN1Q9Y6C2 1016 aa16.35■□□□□ 0.21
CALR-202ENST00000586760 NSD2O96028 1365 aa16.35■□□□□ 0.21
CALR-202ENST00000586760 CYP27B1O15528 508 aa16.34■□□□□ 0.21
CALR-202ENST00000586760 GRIN3BO60391 1043 aa16.34■□□□□ 0.21
CALR-202ENST00000586760 POLR3GLQ9BT43 218 aa16.34■□□□□ 0.21
CALR-202ENST00000586760 PCGF6Q9BYE7 350 aa16.34■□□□□ 0.21
CALR-202ENST00000586760 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.34■□□□□ 0.213e-35■□□□□ 9
CALR-202ENST00000586760 WASHC2AQ641Q2 1341 aa16.34■□□□□ 0.21
CALR-202ENST00000586760 NSD3Q9BZ95 1437 aa16.33■□□□□ 0.2
CALR-202ENST00000586760 NKX1-1Q15270 411 aaPredicted RBP16.32■□□□□ 0.2
CALR-202ENST00000586760 PALLDQ8WX93 1383 aa16.32■□□□□ 0.2
CALR-202ENST00000586760 AK7Q96M32 723 aa16.32■□□□□ 0.2
CALR-202ENST00000586760 FAM208AQ9UK61 1670 aaKnown RBP16.32■□□□□ 0.2
CALR-202ENST00000586760 MYOM1P52179 1685 aa16.31■□□□□ 0.2
CALR-202ENST00000586760 BTAF1O14981 1849 aa16.31■□□□□ 0.2
CALR-202ENST00000586760 PAPPAQ13219 1627 aa16.3■□□□□ 0.2
CALR-202ENST00000586760 IFNL2Q8IZJ0 200 aa16.3■□□□□ 0.2
CALR-202ENST00000586760 PIGBQ92521 554 aa16.3■□□□□ 0.2
CALR-202ENST00000586760 EYA1Q99502 592 aa16.3■□□□□ 0.2
CALR-202ENST00000586760 POLKQ9UBT6 870 aa16.3■□□□□ 0.2
CALR-202ENST00000586760 CD2APQ9Y5K6 639 aa16.3■□□□□ 0.2
CALR-202ENST00000586760 KAT6BQ8WYB5 2073 aa16.3■□□□□ 0.2
CALR-202ENST00000586760 EIF4G2P78344 907 aaKnown RBP eCLIP16.29■□□□□ 0.2
CALR-202ENST00000586760 TMOD3Q9NYL9 352 aa16.29■□□□□ 0.2
CALR-202ENST00000586760 MSL1Q68DK7 614 aa16.28■□□□□ 0.2
CALR-202ENST00000586760 NLGN2Q8NFZ4 835 aa16.28■□□□□ 0.2
CALR-202ENST00000586760 TNNT2P45379 298 aaPredicted RBP16.27■□□□□ 0.2
CALR-202ENST00000586760 LOC102724428A0A0B4J2F2 783 aa16.26■□□□□ 0.19
CALR-202ENST00000586760 SIK1P57059 783 aa16.26■□□□□ 0.19
CALR-202ENST00000586760 HSP90AB1P08238 724 aaKnown RBP16.25■□□□□ 0.19
CALR-202ENST00000586760 PHKG2P15735 406 aa16.25■□□□□ 0.19
CALR-202ENST00000586760 SSFA2P28290 1259 aa16.25■□□□□ 0.19
CALR-202ENST00000586760 C1QTNF8P60827 252 aa16.25■□□□□ 0.19
CALR-202ENST00000586760 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.24■□□□□ 0.19
CALR-202ENST00000586760 PHF14O94880 888 aa16.24■□□□□ 0.19
CALR-202ENST00000586760 EIF4A2Q14240 407 aaKnown RBP16.24■□□□□ 0.19
CALR-202ENST00000586760 PLEKHO1Q53GL0 409 aaPredicted RBP16.24■□□□□ 0.19
CALR-202ENST00000586760 PANK3Q9H999 370 aa16.24■□□□□ 0.19
CALR-202ENST00000586760 GIGYF1O75420 1035 aaPredicted RBP16.23■□□□□ 0.19
CALR-202ENST00000586760 ATP6V1AP38606 617 aa16.23■□□□□ 0.19
CALR-202ENST00000586760 ERVV-2B6SEH9 535 aa16.22■□□□□ 0.19
CALR-202ENST00000586760 AMOTQ4VCS5 1084 aa16.22■□□□□ 0.19
CALR-202ENST00000586760 ASAP1Q9ULH1 1129 aa16.22■□□□□ 0.19
CALR-202ENST00000586760 NCAPD2Q15021 1401 aa16.21■□□□□ 0.19
CALR-202ENST00000586760 HSPA5P11021 654 aaKnown RBP16.21■□□□□ 0.19
CALR-202ENST00000586760 YBX3P16989 372 aaKnown RBP eCLIP16.21■□□□□ 0.197e-26■■■□□ 14.6
CALR-202ENST00000586760 MORC1Q86VD1 984 aa16.21■□□□□ 0.19
CALR-202ENST00000586760 DCAF5Q96JK2 942 aa16.21■□□□□ 0.19
CALR-202ENST00000586760 PLEKHG2Q9H7P9 1386 aa16.21■□□□□ 0.19
CALR-202ENST00000586760 SENP3-EIF4A1A0A087X0R7 540 aa16.2■□□□□ 0.18
CALR-202ENST00000586760 GNPATO15228 680 aa16.2■□□□□ 0.18
CALR-202ENST00000586760 LINC00116Q8NCU8 138 aa16.2■□□□□ 0.18
CALR-202ENST00000586760 CCER1Q8TC90 406 aaPredicted RBP16.2■□□□□ 0.18
CALR-202ENST00000586760 ATG3Q9NT62 314 aa16.2■□□□□ 0.18
CALR-202ENST00000586760 TRAPPC3LQ5T215 181 aa16.19■□□□□ 0.18
CALR-202ENST00000586760 RTCBQ9Y3I0 505 aaKnown RBP16.19■□□□□ 0.18
CALR-202ENST00000586760 KNSTRNQ9Y448 316 aa16.19■□□□□ 0.18
CALR-202ENST00000586760 DOT1LQ8TEK3 1739 aa16.19■□□□□ 0.18
CALR-202ENST00000586760 CABP4P57796 275 aa16.18■□□□□ 0.18
CALR-202ENST00000586760 NLGN1Q8N2Q7 840 aa16.18■□□□□ 0.18
CALR-202ENST00000586760 RBM42Q9BTD8 480 aaKnown RBP16.18■□□□□ 0.18
CALR-202ENST00000586760 IGSF1Q8N6C5 1336 aa16.18■□□□□ 0.18
CALR-202ENST00000586760 ITPK1Q13572 414 aa16.17■□□□□ 0.18
CALR-202ENST00000586760 C1orf141Q5JVX7 400 aa16.17■□□□□ 0.18
CALR-202ENST00000586760 ZNF530Q6P9A1 599 aaPredicted RBP16.17■□□□□ 0.18
CALR-202ENST00000586760 MTHFSP49914 203 aa16.16■□□□□ 0.18
CALR-202ENST00000586760 RC3H1Q5TC82 1133 aaKnown RBP16.16■□□□□ 0.18
CALR-202ENST00000586760 LY75O60449 1722 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 141 ms