RNA–Protein interactions for RNA: ENST00000586486.1

PRKCSH-203, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 1 (best)

Gene PRKCSH, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-203ENST00000586486 CDCA7Q9BWT1 371 aaPredicted RBP22.53■■□□□ 1.2
PRKCSH-203ENST00000586486 LRRC37A3O60309 1634 aa22.53■■□□□ 1.2
PRKCSH-203ENST00000586486 SHANK3Q9BYB0 1731 aa22.51■■□□□ 1.19
PRKCSH-203ENST00000586486 TATP17735 454 aaPredicted RBP22.51■■□□□ 1.19
PRKCSH-203ENST00000586486 RUNDC1Q96C34 613 aa22.5■■□□□ 1.19
PRKCSH-203ENST00000586486 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.49■■□□□ 1.19
PRKCSH-203ENST00000586486 TNS2Q63HR2 1409 aa22.49■■□□□ 1.19
PRKCSH-203ENST00000586486 ONECUT3O60422 494 aaPredicted RBP22.49■■□□□ 1.19
PRKCSH-203ENST00000586486 RBM6P78332 1123 aaKnown RBP22.49■■□□□ 1.19
PRKCSH-203ENST00000586486 MAPK8IP3Q9UPT6 1336 aa22.48■■□□□ 1.19
PRKCSH-203ENST00000586486 NEFMP07197 916 aa22.48■■□□□ 1.19
PRKCSH-203ENST00000586486 FAM98CQ17RN3 349 aaKnown RBP22.48■■□□□ 1.19
PRKCSH-203ENST00000586486 AMOTQ4VCS5 1084 aa22.48■■□□□ 1.19
PRKCSH-203ENST00000586486 CCDC146Q8IYE0 955 aa22.48■■□□□ 1.19
PRKCSH-203ENST00000586486 PHACTR3Q96KR7 559 aa22.47■■□□□ 1.19
PRKCSH-203ENST00000586486 PLEKHO1Q53GL0 409 aaPredicted RBP22.46■■□□□ 1.19
PRKCSH-203ENST00000586486 POTEAQ6S8J7 498 aa22.45■■□□□ 1.18
PRKCSH-203ENST00000586486 SPG7Q9UQ90 795 aa22.45■■□□□ 1.18
PRKCSH-203ENST00000586486 ZCRB1Q8TBF4 217 aaKnown RBP22.44■■□□□ 1.18
PRKCSH-203ENST00000586486 DLG5Q8TDM6 1919 aa22.44■■□□□ 1.18
PRKCSH-203ENST00000586486 MTHFSDQ2M296 383 aaKnown RBP22.43■■□□□ 1.18
PRKCSH-203ENST00000586486 GAS2L2Q8NHY3 880 aa22.43■■□□□ 1.18
PRKCSH-203ENST00000586486 RXRBP28702 533 aa22.42■■□□□ 1.18
PRKCSH-203ENST00000586486 PCDH11XQ9BZA7 1347 aa22.42■■□□□ 1.18
PRKCSH-203ENST00000586486 PCDH11YQ9BZA8 1340 aa22.42■■□□□ 1.18
PRKCSH-203ENST00000586486 DDB1Q16531 1140 aa22.42■■□□□ 1.18
PRKCSH-203ENST00000586486 EXOC5O00471 708 aa22.41■■□□□ 1.18
PRKCSH-203ENST00000586486 NFE2L2Q16236 605 aa22.41■■□□□ 1.18
PRKCSH-203ENST00000586486 ADAMTS7Q9UKP4 1686 aa22.4■■□□□ 1.18
PRKCSH-203ENST00000586486 APAF1O14727 1248 aa22.4■■□□□ 1.18
PRKCSH-203ENST00000586486 TMPOP42166 694 aaKnown RBP22.39■■□□□ 1.18
PRKCSH-203ENST00000586486 NCBP3Q53F19 620 aaKnown RBP22.39■■□□□ 1.18
PRKCSH-203ENST00000586486 ZNF530Q6P9A1 599 aaPredicted RBP22.39■■□□□ 1.18
PRKCSH-203ENST00000586486 SEPT12Q8IYM1 358 aa22.39■■□□□ 1.18
PRKCSH-203ENST00000586486 BRWD3Q6RI45 1802 aa22.39■■□□□ 1.18
PRKCSH-203ENST00000586486 RGS12O14924 1447 aa22.38■■□□□ 1.17
PRKCSH-203ENST00000586486 MAP3K5Q99683 1374 aa22.38■■□□□ 1.17
PRKCSH-203ENST00000586486 CYP27B1O15528 508 aa22.38■■□□□ 1.17
PRKCSH-203ENST00000586486 AKAP4Q5JQC9 854 aa22.38■■□□□ 1.17
PRKCSH-203ENST00000586486 VIRMAQ69YN4 1812 aaKnown RBP22.38■■□□□ 1.17
PRKCSH-203ENST00000586486 A0A0G2JS52 829 aa22.37■■□□□ 1.17
PRKCSH-203ENST00000586486 PHKG2P15735 406 aa22.37■■□□□ 1.17
PRKCSH-203ENST00000586486 MYT1Q01538 1121 aa22.37■■□□□ 1.17
PRKCSH-203ENST00000586486 C1orf141Q5JVX7 400 aa22.37■■□□□ 1.17
PRKCSH-203ENST00000586486 IFNL2Q8IZJ0 200 aa22.37■■□□□ 1.17
PRKCSH-203ENST00000586486 NGEFQ8N5V2 710 aa22.37■■□□□ 1.17
PRKCSH-203ENST00000586486 SCN11AQ9UI33 1791 aa22.36■■□□□ 1.17
PRKCSH-203ENST00000586486 GNAT3A8MTJ3 354 aa22.35■■□□□ 1.17
PRKCSH-203ENST00000586486 HTATSF1O43719 755 aaKnown RBP22.35■■□□□ 1.17
PRKCSH-203ENST00000586486 HSP90AB1P08238 724 aaKnown RBP22.34■■□□□ 1.17
PRKCSH-203ENST00000586486 RIPK4P57078 832 aa22.34■■□□□ 1.17
PRKCSH-203ENST00000586486 LMOD3Q0VAK6 560 aa22.34■■□□□ 1.17
PRKCSH-203ENST00000586486 NKX1-1Q15270 411 aaPredicted RBP22.34■■□□□ 1.17
PRKCSH-203ENST00000586486 RRP7AQ9Y3A4 280 aaKnown RBP22.34■■□□□ 1.17
PRKCSH-203ENST00000586486 CCDC27Q2M243 656 aa22.33■■□□□ 1.17
PRKCSH-203ENST00000586486 DDX54Q8TDD1 881 aaKnown RBP22.33■■□□□ 1.17
PRKCSH-203ENST00000586486 TOGARAM1Q9Y4F4 1720 aa22.33■■□□□ 1.16
PRKCSH-203ENST00000586486 KDM6AO15550 1401 aaPredicted RBP22.32■■□□□ 1.16
PRKCSH-203ENST00000586486 PDE3BQ13370 1112 aa22.32■■□□□ 1.16
PRKCSH-203ENST00000586486 MARCH10Q8NA82 808 aaPredicted RBP22.32■■□□□ 1.16
PRKCSH-203ENST00000586486 BCL9O00512 1426 aa22.32■■□□□ 1.16
PRKCSH-203ENST00000586486 MRC1P22897 1456 aa22.31■■□□□ 1.16
PRKCSH-203ENST00000586486 CEMIPQ8WUJ3 1361 aa22.31■■□□□ 1.16
PRKCSH-203ENST00000586486 NEUROD2Q15784 382 aa22.31■■□□□ 1.16
PRKCSH-203ENST00000586486 DCAF5Q96JK2 942 aa22.31■■□□□ 1.16
PRKCSH-203ENST00000586486 TRIM35Q9UPQ4 493 aa22.31■■□□□ 1.16
PRKCSH-203ENST00000586486 DOT1LQ8TEK3 1739 aa22.3■■□□□ 1.16
PRKCSH-203ENST00000586486 HNRNPUQ00839 825 aaKnown RBP eCLIP22.29■■□□□ 1.16
PRKCSH-203ENST00000586486 RTF1Q92541 710 aaKnown RBP22.29■■□□□ 1.16
PRKCSH-203ENST00000586486 SIPA1L3O60292 1781 aaPredicted RBP22.28■■□□□ 1.16
PRKCSH-203ENST00000586486 KRT27Q7Z3Y8 459 aa22.28■■□□□ 1.16
PRKCSH-203ENST00000586486 MPRIPQ6WCQ1 1025 aa22.28■■□□□ 1.16
PRKCSH-203ENST00000586486 RNMTO43148 476 aaKnown RBP22.27■■□□□ 1.16
PRKCSH-203ENST00000586486 WWC1Q8IX03 1113 aa22.27■■□□□ 1.16
PRKCSH-203ENST00000586486 IL17REQ8NFR9 667 aa22.27■■□□□ 1.16
PRKCSH-203ENST00000586486 ZNF521Q96K83 1311 aa22.27■■□□□ 1.15
PRKCSH-203ENST00000586486 SENP3-EIF4A1A0A087X0R7 540 aa22.26■■□□□ 1.15
PRKCSH-203ENST00000586486 ITGB4P16144 1822 aa22.26■■□□□ 1.15
PRKCSH-203ENST00000586486 SBF2Q86WG5 1849 aa22.26■■□□□ 1.15
PRKCSH-203ENST00000586486 MCM10Q7L590 875 aa22.25■■□□□ 1.15
PRKCSH-203ENST00000586486 NHSQ6T4R5 1651 aa22.25■■□□□ 1.15
PRKCSH-203ENST00000586486 LGR6Q9HBX8 967 aa22.24■■□□□ 1.15
PRKCSH-203ENST00000586486 ZBED9Q6R2W3 1325 aa22.24■■□□□ 1.15
PRKCSH-203ENST00000586486 DCTN1Q14203 1278 aa22.24■■□□□ 1.15
PRKCSH-203ENST00000586486 SALL2Q9Y467 1007 aaPredicted RBP22.24■■□□□ 1.15
PRKCSH-203ENST00000586486 ERVV-2B6SEH9 535 aa22.23■■□□□ 1.15
PRKCSH-203ENST00000586486 CALD1Q05682 793 aaKnown RBP22.22■■□□□ 1.15
PRKCSH-203ENST00000586486 WDR63Q8IWG1 891 aa22.21■■□□□ 1.15
PRKCSH-203ENST00000586486 THUMPD2Q9BTF0 503 aaKnown RBP22.21■■□□□ 1.15
PRKCSH-203ENST00000586486 FAM196AQ6ZSG2 479 aa22.2■■□□□ 1.15
PRKCSH-203ENST00000586486 SLC52A2Q9HAB3 445 aa22.2■■□□□ 1.15
PRKCSH-203ENST00000586486 IL16Q14005 1332 aa22.2■■□□□ 1.14
PRKCSH-203ENST00000586486 TEFQ10587 303 aa22.2■■□□□ 1.14
PRKCSH-203ENST00000586486 PAPPAQ13219 1627 aa22.19■■□□□ 1.14
PRKCSH-203ENST00000586486 FAM182BQ5T319 152 aa22.19■■□□□ 1.14
PRKCSH-203ENST00000586486 KDM3BQ7LBC6 1761 aa22.18■■□□□ 1.14
PRKCSH-203ENST00000586486 CABP4P57796 275 aa22.17■■□□□ 1.14
PRKCSH-203ENST00000586486 YTHDC1Q96MU7 727 aaKnown RBP22.17■■□□□ 1.14
PRKCSH-203ENST00000586486 EP400Q96L91 3159 aa22.17■■□□□ 1.14
PRKCSH-203ENST00000586486 KAT6BQ8WYB5 2073 aa22.16■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms