RNA–Protein interactions for RNA: ENST00000585953.5

RPRD1A-204, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

TSL 3

Gene RPRD1A, Length 2,357 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-204ENST00000585953 MRPL14Q6P1L8 145 aaKnown RBP4.9□□□□□ -1.63
RPRD1A-204ENST00000585953 TBC1D9Q6ZT07 1266 aa4.9□□□□□ -1.63
RPRD1A-204ENST00000585953 NFATC2IPQ8NCF5 419 aa4.9□□□□□ -1.63
RPRD1A-204ENST00000585953 CCDC85AQ96PX6 553 aaPredicted RBP4.9□□□□□ -1.63
RPRD1A-204ENST00000585953 PPP1R12CQ9BZL4 782 aa4.9□□□□□ -1.63
RPRD1A-204ENST00000585953 SERPINA10Q9UK55 444 aa4.9□□□□□ -1.63
RPRD1A-204ENST00000585953 CHIC2Q9UKJ5 165 aa4.9□□□□□ -1.63
RPRD1A-204ENST00000585953 PALM3A6NDB9 673 aaPredicted RBP4.89□□□□□ -1.63
RPRD1A-204ENST00000585953 ATP9BO43861 1147 aa4.89□□□□□ -1.63
RPRD1A-204ENST00000585953 SKIP12755 728 aa4.89□□□□□ -1.63
RPRD1A-204ENST00000585953 NNTQ13423 1086 aa4.89□□□□□ -1.63
RPRD1A-204ENST00000585953 GPAT2Q6NUI2 795 aa4.89□□□□□ -1.63
RPRD1A-204ENST00000585953 PLPP7Q8NBV4 271 aa4.89□□□□□ -1.63
RPRD1A-204ENST00000585953 ERVH48-1M5A8F1 160 aa4.88□□□□□ -1.63
RPRD1A-204ENST00000585953 TSGA10IPQ3SY00 556 aa4.88□□□□□ -1.63
RPRD1A-204ENST00000585953 CFAP70Q5T0N1 1121 aa4.88□□□□□ -1.63
RPRD1A-204ENST00000585953 CCDC116Q8IYX3 515 aa4.88□□□□□ -1.63
RPRD1A-204ENST00000585953 TFIP11Q9UBB9 837 aaKnown RBP4.88□□□□□ -1.63
RPRD1A-204ENST00000585953 MAFBQ9Y5Q3 323 aaPredicted RBP4.88□□□□□ -1.63
RPRD1A-204ENST00000585953 USP17L5A8MUK1 530 aa4.87□□□□□ -1.63
RPRD1A-204ENST00000585953 KANK3Q6NY19 840 aa4.87□□□□□ -1.63
RPRD1A-204ENST00000585953 CCDC125Q86Z20 511 aa4.87□□□□□ -1.63
RPRD1A-204ENST00000585953 ARID3AQ99856 593 aa4.87□□□□□ -1.63
RPRD1A-204ENST00000585953 KRTAP4-8Q9BYQ9 185 aa4.87□□□□□ -1.63
RPRD1A-204ENST00000585953 DOLKQ9UPQ8 538 aa4.87□□□□□ -1.63
RPRD1A-204ENST00000585953 PCDHB11Q9Y5F2 797 aa4.87□□□□□ -1.63
RPRD1A-204ENST00000585953 DHX9Q08211 1270 aaKnown RBP4.87□□□□□ -1.63
RPRD1A-204ENST00000585953 MAP7D1Q3KQU3 841 aa4.87□□□□□ -1.63
RPRD1A-204ENST00000585953 PPP1R26Q5T8A7 1209 aaPredicted RBP4.87□□□□□ -1.63
RPRD1A-204ENST00000585953 USP17L3A6NCW0 530 aa4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 USP17L4A6NCW7 530 aa4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 PPFIA3O75145 1194 aa4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 USP17L2Q6R6M4 530 aa4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 USP17L1Q7RTZ2 530 aa4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 PLEKHM2Q8IWE5 1019 aa4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 CDCA7Q9BWT1 371 aaPredicted RBP4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 TMPRSS4Q9NRS4 437 aa4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 LMOD1P29536 600 aaPredicted RBP4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 NCOA4Q13772 614 aa4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 DEPDC4Q8N2C3 294 aa4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 ZNF784Q8NCA9 323 aaPredicted RBP4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 PURBQ96QR8 312 aaKnown RBP4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 KLF16Q9BXK1 252 aaPredicted RBP4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 EMILIN1Q9Y6C2 1016 aa4.86□□□□□ -1.63
RPRD1A-204ENST00000585953 OXLD1Q5BKU9 147 aa4.85□□□□□ -1.63
RPRD1A-204ENST00000585953 MAN1A2O60476 641 aa4.85□□□□□ -1.63
RPRD1A-204ENST00000585953 SCTRP47872 440 aa4.85□□□□□ -1.63
RPRD1A-204ENST00000585953 ERVK-9P63128 1117 aa4.85□□□□□ -1.63
RPRD1A-204ENST00000585953 ITPKCQ96DU7 683 aa4.85□□□□□ -1.63
RPRD1A-204ENST00000585953 PGPEP1Q9NXJ5 209 aa4.85□□□□□ -1.63
RPRD1A-204ENST00000585953 LZTS3O60299 673 aaPredicted RBP4.84□□□□□ -1.63
RPRD1A-204ENST00000585953 LILRA1O75019 489 aa4.84□□□□□ -1.63
RPRD1A-204ENST00000585953 ZIC2O95409 532 aaPredicted RBP4.84□□□□□ -1.63
RPRD1A-204ENST00000585953 TIMP2P16035 220 aa4.84□□□□□ -1.63
RPRD1A-204ENST00000585953 RFX1P22670 979 aa4.84□□□□□ -1.63
RPRD1A-204ENST00000585953 WDR4P57081 412 aaKnown RBP4.84□□□□□ -1.63
RPRD1A-204ENST00000585953 EML3Q32P44 896 aa4.84□□□□□ -1.63
RPRD1A-204ENST00000585953 CYLDQ9NQC7 956 aa4.84□□□□□ -1.63
RPRD1A-204ENST00000585953 SOBPA7XYQ1 873 aa4.84□□□□□ -1.64
RPRD1A-204ENST00000585953 CC2D2BQ6DHV5 1058 aa4.84□□□□□ -1.64
RPRD1A-204ENST00000585953 ZFAND3Q9H8U3 227 aa4.84□□□□□ -1.64
RPRD1A-204ENST00000585953 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP4.83□□□□□ -1.64
RPRD1A-204ENST00000585953 IRS1P35568 1242 aa4.83□□□□□ -1.64
RPRD1A-204ENST00000585953 ADAM23O75077 832 aa4.83□□□□□ -1.64
RPRD1A-204ENST00000585953 MYCP01106 439 aaPredicted RBP4.83□□□□□ -1.64
RPRD1A-204ENST00000585953 SRPK2P78362 688 aaKnown RBP4.83□□□□□ -1.64
RPRD1A-204ENST00000585953 USP4Q13107 963 aa4.83□□□□□ -1.64
RPRD1A-204ENST00000585953 KANK4Q5T7N3 995 aaPredicted RBP4.83□□□□□ -1.64
RPRD1A-204ENST00000585953 SIRT1Q96EB6 747 aa4.83□□□□□ -1.64
RPRD1A-204ENST00000585953 MKRN1Q9UHC7 482 aaKnown RBP4.83□□□□□ -1.64
RPRD1A-204ENST00000585953 NOD1Q9Y239 953 aa4.83□□□□□ -1.64
RPRD1A-204ENST00000585953 ADD1P35611 737 aaKnown RBP4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 KRT76Q01546 638 aa4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 CBLBQ13191 982 aa4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 TRIM52Q96A61 297 aa4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 PBXIP1Q96AQ6 731 aa4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 SCARF2Q96GP6 870 aaPredicted RBP4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 CNTNAP3BQ96NU0 1288 aa4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 CNTNAP3Q9BZ76 1288 aa4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 OSBPL3Q9H4L5 887 aa4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 ATP5J2-PTCD1G3V325 749 aa4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 ZNF385CQ66K41 422 aaPredicted RBP4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 Q6ZVU0 165 aa4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 VRTNQ9H8Y1 702 aa4.82□□□□□ -1.64
RPRD1A-204ENST00000585953 GTF2IP78347 998 aa4.81□□□□□ -1.64
RPRD1A-204ENST00000585953 CLDN10P78369 228 aa4.81□□□□□ -1.64
RPRD1A-204ENST00000585953 SVOPQ8N4V2 548 aa4.81□□□□□ -1.64
RPRD1A-204ENST00000585953 ADH1AP07327 375 aa4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 MARSP56192 900 aaKnown RBP4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 CDCA8Q53HL2 280 aa4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 TRIM50Q86XT4 487 aa4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 MEIOBQ8N635 442 aa4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 ESF1Q9H501 851 aaKnown RBP4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 PCDHGA11Q9Y5H2 935 aa4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 PPP1R15AO75807 674 aaPredicted RBP4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 ARHGEF15O94989 841 aa4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 CRTC2Q53ET0 693 aaPredicted RBP4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 CYP2U1Q7Z449 544 aa4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 OGFOD1Q8N543 542 aa4.8□□□□□ -1.64
RPRD1A-204ENST00000585953 KIAA1024Q9UPX6 916 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms