RNA–Protein interactions for RNA: ENST00000585371.1

CHAF1A-202, Transcript of chromatin assembly factor 1 subunit A, humanhuman

TSL 5

Gene CHAF1A, Length 884 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHAF1A-202ENST00000585371 APBA3O96018 575 aa17.99■□□□□ 0.47
CHAF1A-202ENST00000585371 RREB1Q92766 1687 aa17.99■□□□□ 0.47
CHAF1A-202ENST00000585371 IGSF1Q8N6C5 1336 aa17.98■□□□□ 0.47
CHAF1A-202ENST00000585371 USHBP1Q8N6Y0 703 aa17.97■□□□□ 0.47
CHAF1A-202ENST00000585371 MEGF6O75095 1541 aa17.97■□□□□ 0.47
CHAF1A-202ENST00000585371 NUP188Q5SRE5 1749 aa17.95■□□□□ 0.46
CHAF1A-202ENST00000585371 PKD1L3Q7Z443 1732 aa17.95■□□□□ 0.46
CHAF1A-202ENST00000585371 DIAPH1O60610 1272 aaKnown RBP17.95■□□□□ 0.46
CHAF1A-202ENST00000585371 KDRP35968 1356 aa17.94■□□□□ 0.46
CHAF1A-202ENST00000585371 OVOS2A0A0G2JMS6 1433 aa17.92■□□□□ 0.46
CHAF1A-202ENST00000585371 ANP32CO43423 234 aa17.92■□□□□ 0.46
CHAF1A-202ENST00000585371 IL2RBP14784 551 aa17.92■□□□□ 0.46
CHAF1A-202ENST00000585371 NBPF14Q5TI25 921 aa17.92■□□□□ 0.46
CHAF1A-202ENST00000585371 AEBP1Q8IUX7 1158 aa17.92■□□□□ 0.46
CHAF1A-202ENST00000585371 CFAP53Q96M91 514 aa17.92■□□□□ 0.46
CHAF1A-202ENST00000585371 RGPD3A6NKT7 1758 aaPredicted RBP17.91■□□□□ 0.46
CHAF1A-202ENST00000585371 RGPD4Q7Z3J3 1758 aa17.91■□□□□ 0.46
CHAF1A-202ENST00000585371 CCDC184Q52MB2 194 aa17.91■□□□□ 0.46
CHAF1A-202ENST00000585371 CDCA7Q9BWT1 371 aaPredicted RBP17.91■□□□□ 0.46
CHAF1A-202ENST00000585371 SBF2Q86WG5 1849 aa17.91■□□□□ 0.46
CHAF1A-202ENST00000585371 TNS2Q63HR2 1409 aa17.9■□□□□ 0.46
CHAF1A-202ENST00000585371 DDB1Q16531 1140 aa17.89■□□□□ 0.45
CHAF1A-202ENST00000585371 SULT6B1Q6IMI4 303 aa17.88■□□□□ 0.45
CHAF1A-202ENST00000585371 PLEKHG2Q9H7P9 1386 aa17.87■□□□□ 0.45
CHAF1A-202ENST00000585371 U2SURPO15042 1029 aaKnown RBP17.86■□□□□ 0.45
CHAF1A-202ENST00000585371 HMOX1P09601 288 aa17.86■□□□□ 0.45
CHAF1A-202ENST00000585371 TATP17735 454 aaPredicted RBP17.86■□□□□ 0.45
CHAF1A-202ENST00000585371 DIEXFQ68CQ4 756 aaKnown RBP17.86■□□□□ 0.45
CHAF1A-202ENST00000585371 RAPGEF4Q8WZA2 1011 aa17.86■□□□□ 0.45
CHAF1A-202ENST00000585371 EXOC5O00471 708 aa17.85■□□□□ 0.45
CHAF1A-202ENST00000585371 BCL9O00512 1426 aa17.85■□□□□ 0.45
CHAF1A-202ENST00000585371 PLSCR1O15162 318 aa17.85■□□□□ 0.45
CHAF1A-202ENST00000585371 VIRMAQ69YN4 1812 aaKnown RBP17.85■□□□□ 0.45
CHAF1A-202ENST00000585371 MARCH10Q8NA82 808 aaPredicted RBP17.85■□□□□ 0.45
CHAF1A-202ENST00000585371 NUDCQ9Y266 331 aa17.85■□□□□ 0.45
CHAF1A-202ENST00000585371 RSPH6AQ9H0K4 717 aa17.84■□□□□ 0.45
CHAF1A-202ENST00000585371 ZCRB1Q8TBF4 217 aaKnown RBP17.83■□□□□ 0.44
CHAF1A-202ENST00000585371 BCL11BQ9C0K0 894 aaPredicted RBP17.83■□□□□ 0.44
CHAF1A-202ENST00000585371 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.83■□□□□ 0.44
CHAF1A-202ENST00000585371 TOGARAM1Q9Y4F4 1720 aa17.82■□□□□ 0.44
CHAF1A-202ENST00000585371 U2AF1L5P0DN76 240 aaPredicted RBP17.82■□□□□ 0.44
CHAF1A-202ENST00000585371 U2AF1Q01081 240 aaKnown RBP eCLIP17.82■□□□□ 0.44
CHAF1A-202ENST00000585371 DLG5Q8TDM6 1919 aa17.81■□□□□ 0.44
CHAF1A-202ENST00000585371 CYP27B1O15528 508 aa17.81■□□□□ 0.44
CHAF1A-202ENST00000585371 SPON1Q9HCB6 807 aa17.81■□□□□ 0.44
CHAF1A-202ENST00000585371 DOT1LQ8TEK3 1739 aa17.81■□□□□ 0.44
CHAF1A-202ENST00000585371 FCHSD2O94868 740 aa17.8■□□□□ 0.44
CHAF1A-202ENST00000585371 PLEKHF1Q96S99 279 aa17.8■□□□□ 0.44
CHAF1A-202ENST00000585371 ITGB4P16144 1822 aa17.79■□□□□ 0.44
CHAF1A-202ENST00000585371 KCNQ2O43526 872 aa17.79■□□□□ 0.44
CHAF1A-202ENST00000585371 PRKAR2BP31323 418 aa17.79■□□□□ 0.44
CHAF1A-202ENST00000585371 PHACTR3Q96KR7 559 aa17.79■□□□□ 0.44
CHAF1A-202ENST00000585371 ADAMTS7Q9UKP4 1686 aa17.79■□□□□ 0.44
CHAF1A-202ENST00000585371 SCN11AQ9UI33 1791 aa17.79■□□□□ 0.44
CHAF1A-202ENST00000585371 NHSQ6T4R5 1651 aa17.78■□□□□ 0.44
CHAF1A-202ENST00000585371 PNISRQ8TF01 805 aaKnown RBP17.78■□□□□ 0.44
CHAF1A-202ENST00000585371 PPP1R1BQ9UD71 204 aaPredicted RBP17.78■□□□□ 0.44
CHAF1A-202ENST00000585371 SPG7Q9UQ90 795 aa17.78■□□□□ 0.44
CHAF1A-202ENST00000585371 PCDH11XQ9BZA7 1347 aa17.77■□□□□ 0.44
CHAF1A-202ENST00000585371 PCDH11YQ9BZA8 1340 aa17.77■□□□□ 0.44
CHAF1A-202ENST00000585371 KAT6BQ8WYB5 2073 aa17.77■□□□□ 0.44
CHAF1A-202ENST00000585371 PLEKHO1Q53GL0 409 aaPredicted RBP17.77■□□□□ 0.44
CHAF1A-202ENST00000585371 MIER1Q8N108 512 aa17.77■□□□□ 0.44
CHAF1A-202ENST00000585371 DDX54Q8TDD1 881 aaKnown RBP17.77■□□□□ 0.44
CHAF1A-202ENST00000585371 MRS2Q9HD23 443 aa17.77■□□□□ 0.44
CHAF1A-202ENST00000585371 ADAMTS8Q9UP79 889 aa17.77■□□□□ 0.44
CHAF1A-202ENST00000585371 CASZ1Q86V15 1759 aa17.76■□□□□ 0.43
CHAF1A-202ENST00000585371 PHKG2P15735 406 aa17.76■□□□□ 0.43
CHAF1A-202ENST00000585371 NKX1-1Q15270 411 aaPredicted RBP17.76■□□□□ 0.43
CHAF1A-202ENST00000585371 MTHFSDQ2M296 383 aaKnown RBP17.76■□□□□ 0.43
CHAF1A-202ENST00000585371 AMOTQ4VCS5 1084 aa17.76■□□□□ 0.43
CHAF1A-202ENST00000585371 CCER2I3L3R5 266 aa17.74■□□□□ 0.43
CHAF1A-202ENST00000585371 BTAF1O14981 1849 aa17.74■□□□□ 0.43
CHAF1A-202ENST00000585371 KDM6AO15550 1401 aaPredicted RBP17.73■□□□□ 0.43
CHAF1A-202ENST00000585371 WDR43Q15061 677 aaKnown RBP eCLIP17.73■□□□□ 0.43
CHAF1A-202ENST00000585371 ZNF530Q6P9A1 599 aaPredicted RBP17.73■□□□□ 0.43
CHAF1A-202ENST00000585371 PTF1AQ7RTS3 328 aa17.73■□□□□ 0.43
CHAF1A-202ENST00000585371 IFNL2Q8IZJ0 200 aa17.73■□□□□ 0.43
CHAF1A-202ENST00000585371 ANO8Q9HCE9 1232 aaPredicted RBP17.73■□□□□ 0.43
CHAF1A-202ENST00000585371 DCAF8L1A6NGE4 600 aa17.72■□□□□ 0.43
CHAF1A-202ENST00000585371 PROM2Q8N271 834 aa17.72■□□□□ 0.43
CHAF1A-202ENST00000585371 SIPA1L3O60292 1781 aaPredicted RBP17.71■□□□□ 0.43
CHAF1A-202ENST00000585371 TXNRD1Q16881 649 aa17.71■□□□□ 0.43
CHAF1A-202ENST00000585371 AKAP4Q5JQC9 854 aa17.7■□□□□ 0.42
CHAF1A-202ENST00000585371 GAS2L2Q8NHY3 880 aa17.7■□□□□ 0.42
CHAF1A-202ENST00000585371 STK32BQ9NY57 414 aa17.7■□□□□ 0.42
CHAF1A-202ENST00000585371 CCDC146Q8IYE0 955 aa17.69■□□□□ 0.42
CHAF1A-202ENST00000585371 RUNDC1Q96C34 613 aa17.69■□□□□ 0.42
CHAF1A-202ENST00000585371 ACSBG1Q96GR2 724 aa17.69■□□□□ 0.42
CHAF1A-202ENST00000585371 PNNQ9H307 717 aaKnown RBP17.68■□□□□ 0.42
CHAF1A-202ENST00000585371 MRC1P22897 1456 aa17.68■□□□□ 0.42
CHAF1A-202ENST00000585371 MAP3K5Q99683 1374 aa17.67■□□□□ 0.42
CHAF1A-202ENST00000585371 SLC15A2Q16348 729 aa17.67■□□□□ 0.42
CHAF1A-202ENST00000585371 C1orf141Q5JVX7 400 aa17.67■□□□□ 0.42
CHAF1A-202ENST00000585371 MPRIPQ6WCQ1 1025 aa17.67■□□□□ 0.42
CHAF1A-202ENST00000585371 DCAF5Q96JK2 942 aa17.67■□□□□ 0.42
CHAF1A-202ENST00000585371 LGR6Q9HBX8 967 aa17.67■□□□□ 0.42
CHAF1A-202ENST00000585371 RNMTO43148 476 aaKnown RBP17.66■□□□□ 0.42
CHAF1A-202ENST00000585371 HSP90AB1P08238 724 aaKnown RBP17.66■□□□□ 0.42
CHAF1A-202ENST00000585371 YY1P25490 414 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms