RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 PLEKHF1Q96S99 279 aa24.23■■□□□ 1.47
RFFL-211ENST00000584541 GLI3P10071 1580 aa24.22■■□□□ 1.47
RFFL-211ENST00000584541 MEGF6O75095 1541 aa24.22■■□□□ 1.47
RFFL-211ENST00000584541 PKD1L3Q7Z443 1732 aa24.21■■□□□ 1.47
RFFL-211ENST00000584541 AMOTQ4VCS5 1084 aa24.21■■□□□ 1.47
RFFL-211ENST00000584541 PLEKHO1Q53GL0 409 aaPredicted RBP24.21■■□□□ 1.47
RFFL-211ENST00000584541 OVOS2A0A0G2JMS6 1433 aa24.2■■□□□ 1.46
RFFL-211ENST00000584541 DISP2A7MBM2 1401 aa24.19■■□□□ 1.46
RFFL-211ENST00000584541 SPG7Q9UQ90 795 aa24.19■■□□□ 1.46
RFFL-211ENST00000584541 FAM98CQ17RN3 349 aaKnown RBP24.18■■□□□ 1.46
RFFL-211ENST00000584541 PHACTR3Q96KR7 559 aa24.18■■□□□ 1.46
RFFL-211ENST00000584541 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP24.18■■□□□ 1.46
RFFL-211ENST00000584541 DLG5Q8TDM6 1919 aa24.18■■□□□ 1.46
RFFL-211ENST00000584541 GAS2L2Q8NHY3 880 aa24.17■■□□□ 1.46
RFFL-211ENST00000584541 A0A0G2JS52 829 aa24.16■■□□□ 1.46
RFFL-211ENST00000584541 RBM6P78332 1123 aaKnown RBP24.16■■□□□ 1.46
RFFL-211ENST00000584541 MYT1Q01538 1121 aa24.16■■□□□ 1.46
RFFL-211ENST00000584541 THSD7AQ9UPZ6 1657 aa24.15■■□□□ 1.46
RFFL-211ENST00000584541 LRRC37A3O60309 1634 aa24.15■■□□□ 1.46
RFFL-211ENST00000584541 APAF1O14727 1248 aa24.15■■□□□ 1.46
RFFL-211ENST00000584541 ZCRB1Q8TBF4 217 aaKnown RBP24.15■■□□□ 1.46
RFFL-211ENST00000584541 EXOC5O00471 708 aa24.14■■□□□ 1.45
RFFL-211ENST00000584541 NFE2L2Q16236 605 aa24.14■■□□□ 1.45
RFFL-211ENST00000584541 MTHFSDQ2M296 383 aaKnown RBP24.14■■□□□ 1.45
RFFL-211ENST00000584541 SHANK3Q9BYB0 1731 aa24.14■■□□□ 1.45
RFFL-211ENST00000584541 RGS17Q9UGC6 210 aaPredicted RBP24.14■■□□□ 1.45
RFFL-211ENST00000584541 DDB1Q16531 1140 aa24.13■■□□□ 1.45
RFFL-211ENST00000584541 ZNF530Q6P9A1 599 aaPredicted RBP24.13■■□□□ 1.45
RFFL-211ENST00000584541 PCDH11XQ9BZA7 1347 aa24.12■■□□□ 1.45
RFFL-211ENST00000584541 PCDH11YQ9BZA8 1340 aa24.12■■□□□ 1.45
RFFL-211ENST00000584541 TNS2Q63HR2 1409 aa24.12■■□□□ 1.45
RFFL-211ENST00000584541 RXRBP28702 533 aa24.12■■□□□ 1.45
RFFL-211ENST00000584541 TMPOP42166 694 aaKnown RBP24.12■■□□□ 1.45
RFFL-211ENST00000584541 C1orf141Q5JVX7 400 aa24.12■■□□□ 1.45
RFFL-211ENST00000584541 NGEFQ8N5V2 710 aa24.11■■□□□ 1.45
RFFL-211ENST00000584541 VIRMAQ69YN4 1812 aaKnown RBP24.1■■□□□ 1.45
RFFL-211ENST00000584541 ONECUT3O60422 494 aaPredicted RBP24.1■■□□□ 1.45
RFFL-211ENST00000584541 RIPK4P57078 832 aa24.1■■□□□ 1.45
RFFL-211ENST00000584541 NEUROD2Q15784 382 aa24.1■■□□□ 1.45
RFFL-211ENST00000584541 HNRNPUQ00839 825 aaKnown RBP eCLIP24.09■■□□□ 1.45
RFFL-211ENST00000584541 LMOD3Q0VAK6 560 aa24.09■■□□□ 1.45
RFFL-211ENST00000584541 AKAP4Q5JQC9 854 aa24.09■■□□□ 1.45
RFFL-211ENST00000584541 IFNL2Q8IZJ0 200 aa24.09■■□□□ 1.45
RFFL-211ENST00000584541 RRP7AQ9Y3A4 280 aaKnown RBP24.09■■□□□ 1.45
RFFL-211ENST00000584541 POTEAQ6S8J7 498 aa24.08■■□□□ 1.45
RFFL-211ENST00000584541 DDX54Q8TDD1 881 aaKnown RBP24.08■■□□□ 1.45
RFFL-211ENST00000584541 MAP3K5Q99683 1374 aa24.07■■□□□ 1.44
RFFL-211ENST00000584541 GNAT3A8MTJ3 354 aa24.07■■□□□ 1.44
RFFL-211ENST00000584541 SEPT12Q8IYM1 358 aa24.07■■□□□ 1.44
RFFL-211ENST00000584541 RTF1Q92541 710 aaKnown RBP24.07■■□□□ 1.44
RFFL-211ENST00000584541 HSP90AB1P08238 724 aaKnown RBP24.06■■□□□ 1.44
RFFL-211ENST00000584541 PHKG2P15735 406 aa24.06■■□□□ 1.44
RFFL-211ENST00000584541 PDE3BQ13370 1112 aa24.06■■□□□ 1.44
RFFL-211ENST00000584541 NCBP3Q53F19 620 aaKnown RBP24.06■■□□□ 1.44
RFFL-211ENST00000584541 SENP3-EIF4A1A0A087X0R7 540 aa24.05■■□□□ 1.44
RFFL-211ENST00000584541 HTATSF1O43719 755 aaKnown RBP24.05■■□□□ 1.44
RFFL-211ENST00000584541 SALL2Q9Y467 1007 aaPredicted RBP24.05■■□□□ 1.44
RFFL-211ENST00000584541 BRWD3Q6RI45 1802 aa24.05■■□□□ 1.44
RFFL-211ENST00000584541 SCN11AQ9UI33 1791 aa24.04■■□□□ 1.44
RFFL-211ENST00000584541 CYP27B1O15528 508 aa24.04■■□□□ 1.44
RFFL-211ENST00000584541 CCDC27Q2M243 656 aa24.03■■□□□ 1.44
RFFL-211ENST00000584541 YTHDC1Q96MU7 727 aaKnown RBP24.03■■□□□ 1.44
RFFL-211ENST00000584541 DCAF5Q96JK2 942 aa24■■□□□ 1.43
RFFL-211ENST00000584541 TRIM35Q9UPQ4 493 aa24■■□□□ 1.43
RFFL-211ENST00000584541 ADAMTS7Q9UKP4 1686 aa23.99■■□□□ 1.43
RFFL-211ENST00000584541 NKX1-1Q15270 411 aaPredicted RBP23.99■■□□□ 1.43
RFFL-211ENST00000584541 MPRIPQ6WCQ1 1025 aa23.99■■□□□ 1.43
RFFL-211ENST00000584541 CALD1Q05682 793 aaKnown RBP23.98■■□□□ 1.43
RFFL-211ENST00000584541 WWC1Q8IX03 1113 aa23.98■■□□□ 1.43
RFFL-211ENST00000584541 MARCH10Q8NA82 808 aaPredicted RBP23.98■■□□□ 1.43
RFFL-211ENST00000584541 RGS12O14924 1447 aa23.98■■□□□ 1.43
RFFL-211ENST00000584541 MCM10Q7L590 875 aa23.97■■□□□ 1.43
RFFL-211ENST00000584541 KRT27Q7Z3Y8 459 aa23.97■■□□□ 1.43
RFFL-211ENST00000584541 KAT6BQ8WYB5 2073 aa23.97■■□□□ 1.43
RFFL-211ENST00000584541 DOT1LQ8TEK3 1739 aa23.96■■□□□ 1.43
RFFL-211ENST00000584541 ZBED9Q6R2W3 1325 aa23.96■■□□□ 1.43
RFFL-211ENST00000584541 RNMTO43148 476 aaKnown RBP23.96■■□□□ 1.43
RFFL-211ENST00000584541 DCTN1Q14203 1278 aa23.96■■□□□ 1.43
RFFL-211ENST00000584541 KDM6AO15550 1401 aaPredicted RBP23.95■■□□□ 1.42
RFFL-211ENST00000584541 IL17REQ8NFR9 667 aa23.95■■□□□ 1.42
RFFL-211ENST00000584541 ITGB4P16144 1822 aa23.94■■□□□ 1.42
RFFL-211ENST00000584541 TOGARAM1Q9Y4F4 1720 aa23.94■■□□□ 1.42
RFFL-211ENST00000584541 TEFQ10587 303 aa23.94■■□□□ 1.42
RFFL-211ENST00000584541 WDR63Q8IWG1 891 aa23.94■■□□□ 1.42
RFFL-211ENST00000584541 LGR6Q9HBX8 967 aa23.94■■□□□ 1.42
RFFL-211ENST00000584541 CEMIPQ8WUJ3 1361 aa23.93■■□□□ 1.42
RFFL-211ENST00000584541 SIPA1L3O60292 1781 aaPredicted RBP23.93■■□□□ 1.42
RFFL-211ENST00000584541 ERVV-2B6SEH9 535 aa23.92■■□□□ 1.42
RFFL-211ENST00000584541 THUMPD2Q9BTF0 503 aaKnown RBP23.92■■□□□ 1.42
RFFL-211ENST00000584541 CABP4P57796 275 aa23.91■■□□□ 1.42
RFFL-211ENST00000584541 ZNF521Q96K83 1311 aa23.9■■□□□ 1.42
RFFL-211ENST00000584541 MRC1P22897 1456 aa23.9■■□□□ 1.42
RFFL-211ENST00000584541 SBF2Q86WG5 1849 aa23.9■■□□□ 1.42
RFFL-211ENST00000584541 BCL9O00512 1426 aa23.9■■□□□ 1.42
RFFL-211ENST00000584541 IL16Q14005 1332 aa23.89■■□□□ 1.42
RFFL-211ENST00000584541 GOLGA2Q08379 1002 aa23.89■■□□□ 1.41
RFFL-211ENST00000584541 FAM196AQ6ZSG2 479 aa23.89■■□□□ 1.41
RFFL-211ENST00000584541 SLC52A2Q9HAB3 445 aa23.89■■□□□ 1.41
RFFL-211ENST00000584541 NHSQ6T4R5 1651 aa23.87■■□□□ 1.41
RFFL-211ENST00000584541 GNAI1P63096 354 aa23.87■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms