RNA–Protein interactions for RNA: ENST00000584525.5

CDK5RAP3-234, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-234ENST00000584525 ANKRD36BQ8N2N9 1353 aa18.32■□□□□ 0.52
CDK5RAP3-234ENST00000584525 ST20-MTHFSA0A0A6YYL1 179 aa18.32■□□□□ 0.52
CDK5RAP3-234ENST00000584525 MSH5O43196 834 aa18.32■□□□□ 0.52
CDK5RAP3-234ENST00000584525 USP54Q70EL1 1684 aa18.31■□□□□ 0.52
CDK5RAP3-234ENST00000584525 TESK2Q96S53 571 aa18.31■□□□□ 0.52
CDK5RAP3-234ENST00000584525 CCNL1Q9UK58 526 aaPredicted RBP18.31■□□□□ 0.52
CDK5RAP3-234ENST00000584525 SENP3-EIF4A1A0A087X0R7 540 aa18.3■□□□□ 0.52
CDK5RAP3-234ENST00000584525 C1QTNF8P60827 252 aa18.3■□□□□ 0.52
CDK5RAP3-234ENST00000584525 BTAF1O14981 1849 aa18.3■□□□□ 0.52
CDK5RAP3-234ENST00000584525 SLC24A1O60721 1099 aa18.29■□□□□ 0.52
CDK5RAP3-234ENST00000584525 RRS1Q15050 365 aaKnown RBP18.29■□□□□ 0.52
CDK5RAP3-234ENST00000584525 LTN1O94822 1766 aa18.29■□□□□ 0.52
CDK5RAP3-234ENST00000584525 NLGN2Q8NFZ4 835 aa18.28■□□□□ 0.52
CDK5RAP3-234ENST00000584525 NSD2O96028 1365 aa18.28■□□□□ 0.52
CDK5RAP3-234ENST00000584525 NBPF6Q5VWK0 638 aa18.27■□□□□ 0.52
CDK5RAP3-234ENST00000584525 USHBP1Q8N6Y0 703 aa18.27■□□□□ 0.52
CDK5RAP3-234ENST00000584525 RAPGEF4Q8WZA2 1011 aa18.27■□□□□ 0.52
CDK5RAP3-234ENST00000584525 NBPF4Q96M43 638 aa18.27■□□□□ 0.52
CDK5RAP3-234ENST00000584525 USP47Q96K76 1375 aa18.27■□□□□ 0.51
CDK5RAP3-234ENST00000584525 MEGF6O75095 1541 aa18.25■□□□□ 0.51
CDK5RAP3-234ENST00000584525 COL23A1Q86Y22 540 aaPredicted RBP18.25■□□□□ 0.51
CDK5RAP3-234ENST00000584525 GGNBP2Q9H3C7 697 aa18.25■□□□□ 0.51
CDK5RAP3-234ENST00000584525 CGNL1Q0VF96 1302 aa18.24■□□□□ 0.51
CDK5RAP3-234ENST00000584525 FYB1O15117 783 aa18.24■□□□□ 0.51
CDK5RAP3-234ENST00000584525 TATP17735 454 aaPredicted RBP18.24■□□□□ 0.51
CDK5RAP3-234ENST00000584525 RTL1A6NKG5 1358 aa18.24■□□□□ 0.51
CDK5RAP3-234ENST00000584525 GIGYF1O75420 1035 aaPredicted RBP18.23■□□□□ 0.51
CDK5RAP3-234ENST00000584525 MSL1Q68DK7 614 aa18.23■□□□□ 0.51
CDK5RAP3-234ENST00000584525 SMG6Q86US8 1419 aaKnown RBP18.23■□□□□ 0.51
CDK5RAP3-234ENST00000584525 GRIN3BO60391 1043 aa18.22■□□□□ 0.51
CDK5RAP3-234ENST00000584525 TMF1P82094 1093 aa18.22■□□□□ 0.51
CDK5RAP3-234ENST00000584525 HSP90AB2PQ58FF8 381 aa18.21■□□□□ 0.51
CDK5RAP3-234ENST00000584525 YBX3P16989 372 aaKnown RBP eCLIP18.2■□□□□ 0.5
CDK5RAP3-234ENST00000584525 MPRIPQ6WCQ1 1025 aa18.2■□□□□ 0.5
CDK5RAP3-234ENST00000584525 KAT6BQ8WYB5 2073 aa18.19■□□□□ 0.5
CDK5RAP3-234ENST00000584525 FAM208AQ9UK61 1670 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-234ENST00000584525 HMGB2P26583 209 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-234ENST00000584525 GOLGB1Q14789 3259 aaKnown RBP18.19■□□□□ 0.5
CDK5RAP3-234ENST00000584525 PCDH11XQ9BZA7 1347 aa18.19■□□□□ 0.5
CDK5RAP3-234ENST00000584525 PCDH11YQ9BZA8 1340 aa18.19■□□□□ 0.5
CDK5RAP3-234ENST00000584525 FLAD1Q8NFF5 587 aa18.17■□□□□ 0.5
CDK5RAP3-234ENST00000584525 INSRP06213 1382 aa18.17■□□□□ 0.5
CDK5RAP3-234ENST00000584525 PALLDQ8WX93 1383 aa18.17■□□□□ 0.5
CDK5RAP3-234ENST00000584525 DOT1LQ8TEK3 1739 aa18.16■□□□□ 0.5
CDK5RAP3-234ENST00000584525 CDCA8Q53HL2 280 aa18.15■□□□□ 0.5
CDK5RAP3-234ENST00000584525 CD2APQ9Y5K6 639 aa18.15■□□□□ 0.5
CDK5RAP3-234ENST00000584525 FLT4P35916 1363 aa18.15■□□□□ 0.5
CDK5RAP3-234ENST00000584525 PPM1GO15355 546 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-234ENST00000584525 CYP27B1O15528 508 aa18.14■□□□□ 0.49
CDK5RAP3-234ENST00000584525 SMARCC1Q92922 1105 aaPredicted RBP18.14■□□□□ 0.49
CDK5RAP3-234ENST00000584525 AK7Q96M32 723 aa18.14■□□□□ 0.49
CDK5RAP3-234ENST00000584525 QSER1Q2KHR3 1735 aa18.13■□□□□ 0.49
CDK5RAP3-234ENST00000584525 EIF4G2P78344 907 aaKnown RBP eCLIP18.13■□□□□ 0.49
CDK5RAP3-234ENST00000584525 PHF14O94880 888 aa18.12■□□□□ 0.49
CDK5RAP3-234ENST00000584525 EMILIN1Q9Y6C2 1016 aa18.12■□□□□ 0.49
CDK5RAP3-234ENST00000584525 KIF24Q5T7B8 1368 aa18.12■□□□□ 0.49
CDK5RAP3-234ENST00000584525 CHD4Q14839 1912 aa18.11■□□□□ 0.49
CDK5RAP3-234ENST00000584525 PIGBQ92521 554 aa18.11■□□□□ 0.49
CDK5RAP3-234ENST00000584525 CARD14Q9BXL6 1004 aa18.11■□□□□ 0.49
CDK5RAP3-234ENST00000584525 LY75O60449 1722 aa18.11■□□□□ 0.49
CDK5RAP3-234ENST00000584525 SMIM5Q71RC9 77 aa18.1■□□□□ 0.49
CDK5RAP3-234ENST00000584525 POLR3GLQ9BT43 218 aa18.1■□□□□ 0.49
CDK5RAP3-234ENST00000584525 SPG7Q9UQ90 795 aa18.1■□□□□ 0.49
CDK5RAP3-234ENST00000584525 SHANK3Q9BYB0 1731 aa18.09■□□□□ 0.49
CDK5RAP3-234ENST00000584525 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.09■□□□□ 0.49
CDK5RAP3-234ENST00000584525 AMIGO3Q86WK7 504 aa18.09■□□□□ 0.49
CDK5RAP3-234ENST00000584525 COL24A1Q17RW2 1714 aa18.09■□□□□ 0.49
CDK5RAP3-234ENST00000584525 TUBGCP6Q96RT7 1819 aa18.08■□□□□ 0.48
CDK5RAP3-234ENST00000584525 WWC3Q9ULE0 1092 aa18.08■□□□□ 0.48
CDK5RAP3-234ENST00000584525 RGPD2P0DJD1 1756 aa18.08■□□□□ 0.48
CDK5RAP3-234ENST00000584525 ATP10DQ9P241 1426 aa18.07■□□□□ 0.48
CDK5RAP3-234ENST00000584525 LOC102724428A0A0B4J2F2 783 aa18.07■□□□□ 0.48
CDK5RAP3-234ENST00000584525 SIK1P57059 783 aa18.07■□□□□ 0.48
CDK5RAP3-234ENST00000584525 NKX1-1Q15270 411 aaPredicted RBP18.07■□□□□ 0.48
CDK5RAP3-234ENST00000584525 GPBP1L1Q9HC44 474 aaPredicted RBP18.07■□□□□ 0.48
CDK5RAP3-234ENST00000584525 NSD3Q9BZ95 1437 aa18.06■□□□□ 0.48
CDK5RAP3-234ENST00000584525 ZNF526Q8TF50 670 aaPredicted RBP18.06■□□□□ 0.48
CDK5RAP3-234ENST00000584525 TMOD3Q9NYL9 352 aa18.06■□□□□ 0.48
CDK5RAP3-234ENST00000584525 HSPA5P11021 654 aaKnown RBP18.05■□□□□ 0.48
CDK5RAP3-234ENST00000584525 SSFA2P28290 1259 aa18.05■□□□□ 0.48
CDK5RAP3-234ENST00000584525 LINC00116Q8NCU8 138 aa18.05■□□□□ 0.48
CDK5RAP3-234ENST00000584525 EYA1Q99502 592 aa18.05■□□□□ 0.48
CDK5RAP3-234ENST00000584525 WASHC2AQ641Q2 1341 aa18.04■□□□□ 0.48
CDK5RAP3-234ENST00000584525 IGSF1Q8N6C5 1336 aa18.04■□□□□ 0.48
CDK5RAP3-234ENST00000584525 ASAP1Q9ULH1 1129 aa18.04■□□□□ 0.48
CDK5RAP3-234ENST00000584525 GNPATO15228 680 aa18.03■□□□□ 0.48
CDK5RAP3-234ENST00000584525 ATP6V1AP38606 617 aa18.03■□□□□ 0.48
CDK5RAP3-234ENST00000584525 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.03■□□□□ 0.486e-16■■□□□ 12.3
CDK5RAP3-234ENST00000584525 IFNL2Q8IZJ0 200 aa18.02■□□□□ 0.48
CDK5RAP3-234ENST00000584525 C5P01031 1676 aa18.02■□□□□ 0.47
CDK5RAP3-234ENST00000584525 PHKG2P15735 406 aa18.01■□□□□ 0.47
CDK5RAP3-234ENST00000584525 ITPK1Q13572 414 aa18.01■□□□□ 0.47
CDK5RAP3-234ENST00000584525 TNNT2P45379 298 aaPredicted RBP18■□□□□ 0.47
CDK5RAP3-234ENST00000584525 ATG3Q9NT62 314 aa18■□□□□ 0.47
CDK5RAP3-234ENST00000584525 POLKQ9UBT6 870 aa18■□□□□ 0.47
CDK5RAP3-234ENST00000584525 C4BP0C0L5 1744 aa18■□□□□ 0.47
CDK5RAP3-234ENST00000584525 CEP350Q5VT06 3117 aa18■□□□□ 0.47
CDK5RAP3-234ENST00000584525 NCAPD2Q15021 1401 aa17.99■□□□□ 0.47
CDK5RAP3-234ENST00000584525 MMP10P09238 476 aa17.99■□□□□ 0.47
CDK5RAP3-234ENST00000584525 ADCY9O60503 1353 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms