RNA–Protein interactions for RNA: ENST00000581662.1

CDK5RAP3-221, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 557 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-221ENST00000581662 ERBB3P21860 1342 aa12.1□□□□□ -0.47
CDK5RAP3-221ENST00000581662 SLC15A2Q16348 729 aa12.09□□□□□ -0.47
CDK5RAP3-221ENST00000581662 ZSWIM6Q9HCJ5 1215 aa12.09□□□□□ -0.47
CDK5RAP3-221ENST00000581662 TRPM3Q9HCF6 1732 aaPredicted RBP12.08□□□□□ -0.47
CDK5RAP3-221ENST00000581662 PLEKHH1Q9ULM0 1364 aa12.08□□□□□ -0.48
CDK5RAP3-221ENST00000581662 ALS2Q96Q42 1657 aa12.08□□□□□ -0.48
CDK5RAP3-221ENST00000581662 LOC105371045A0A1W2PR82 267 aa12.08□□□□□ -0.48
CDK5RAP3-221ENST00000581662 C11orf95C9JLR9 678 aaPredicted RBP12.08□□□□□ -0.48
CDK5RAP3-221ENST00000581662 KIF3CO14782 793 aa12.08□□□□□ -0.48
CDK5RAP3-221ENST00000581662 YBX3P16989 372 aaKnown RBP eCLIP12.08□□□□□ -0.48
CDK5RAP3-221ENST00000581662 RYDENQ9NUL5 291 aaKnown RBP12.08□□□□□ -0.48
CDK5RAP3-221ENST00000581662 STK32BQ9NY57 414 aa12.08□□□□□ -0.48
CDK5RAP3-221ENST00000581662 OVOS2A0A0G2JMS6 1433 aa12.08□□□□□ -0.48
CDK5RAP3-221ENST00000581662 OVOS2A0A0J9YW53 1432 aa12.08□□□□□ -0.48
CDK5RAP3-221ENST00000581662 OVOS2Q6IE36 1432 aa12.08□□□□□ -0.48
CDK5RAP3-221ENST00000581662 PTF1AQ7RTS3 328 aa12.07□□□□□ -0.48
CDK5RAP3-221ENST00000581662 SSH2Q76I76 1423 aa12.06□□□□□ -0.48
CDK5RAP3-221ENST00000581662 GRIN3BO60391 1043 aa12.06□□□□□ -0.48
CDK5RAP3-221ENST00000581662 NKX1-1Q15270 411 aaPredicted RBP12.06□□□□□ -0.48
CDK5RAP3-221ENST00000581662 WAPLQ7Z5K2 1190 aa12.06□□□□□ -0.48
CDK5RAP3-221ENST00000581662 PRDM11Q9NQV5 511 aa12.06□□□□□ -0.48
CDK5RAP3-221ENST00000581662 PCNTO95613 3336 aa12.06□□□□□ -0.48
CDK5RAP3-221ENST00000581662 PARP4Q9UKK3 1724 aaKnown RBP12.06□□□□□ -0.48
CDK5RAP3-221ENST00000581662 CLTCL1P53675 1640 aa12.05□□□□□ -0.48
CDK5RAP3-221ENST00000581662 POTEB3A0JP26 581 aa12.05□□□□□ -0.48
CDK5RAP3-221ENST00000581662 ARSIQ5FYB1 569 aa12.05□□□□□ -0.48
CDK5RAP3-221ENST00000581662 POTEBQ6S5H4 581 aa12.05□□□□□ -0.48
CDK5RAP3-221ENST00000581662 NLGN2Q8NFZ4 835 aa12.05□□□□□ -0.48
CDK5RAP3-221ENST00000581662 ATP7BP35670 1465 aa12.05□□□□□ -0.48
CDK5RAP3-221ENST00000581662 DHX57Q6P158 1386 aaKnown RBP12.05□□□□□ -0.48
CDK5RAP3-221ENST00000581662 AATKQ6ZMQ8 1374 aa12.05□□□□□ -0.48
CDK5RAP3-221ENST00000581662 KLRG1Q96E93 195 aa12.04□□□□□ -0.48
CDK5RAP3-221ENST00000581662 USP35Q9P2H5 1018 aa12.04□□□□□ -0.48
CDK5RAP3-221ENST00000581662 WWC3Q9ULE0 1092 aa12.04□□□□□ -0.48
CDK5RAP3-221ENST00000581662 PAPPAQ13219 1627 aa12.04□□□□□ -0.48
CDK5RAP3-221ENST00000581662 KIAA0232Q92628 1395 aa12.04□□□□□ -0.48
CDK5RAP3-221ENST00000581662 TXNRD1Q16881 649 aa12.03□□□□□ -0.48
CDK5RAP3-221ENST00000581662 GPR153Q6NV75 609 aa12.03□□□□□ -0.48
CDK5RAP3-221ENST00000581662 TCP11L2Q8N4U5 519 aa12.03□□□□□ -0.48
CDK5RAP3-221ENST00000581662 ZNF526Q8TF50 670 aaPredicted RBP12.03□□□□□ -0.48
CDK5RAP3-221ENST00000581662 STRN4Q9NRL3 753 aa12.03□□□□□ -0.48
CDK5RAP3-221ENST00000581662 SBF2Q86WG5 1849 aa12.02□□□□□ -0.48
CDK5RAP3-221ENST00000581662 COL24A1Q17RW2 1714 aa12.02□□□□□ -0.49
CDK5RAP3-221ENST00000581662 WDR90Q96KV7 1748 aa12.02□□□□□ -0.49
CDK5RAP3-221ENST00000581662 BCL9O00512 1426 aa12.02□□□□□ -0.49
CDK5RAP3-221ENST00000581662 CHRNA2Q15822 529 aa12.01□□□□□ -0.49
CDK5RAP3-221ENST00000581662 VARS2Q5ST30 1063 aaKnown RBP12.01□□□□□ -0.49
CDK5RAP3-221ENST00000581662 ABCC11Q96J66 1382 aa12.01□□□□□ -0.49
CDK5RAP3-221ENST00000581662 KNDC1Q76NI1 1749 aa12□□□□□ -0.49
CDK5RAP3-221ENST00000581662 IFT172Q9UG01 1749 aa12□□□□□ -0.49
CDK5RAP3-221ENST00000581662 TNS2Q63HR2 1409 aa12□□□□□ -0.49
CDK5RAP3-221ENST00000581662 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
CDK5RAP3-221ENST00000581662 LARP1Q6PKG0 1096 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-221ENST00000581662 KHSRPQ92945 711 aaKnown RBP eCLIP11.99□□□□□ -0.497e-7■□□□□ 9.1
CDK5RAP3-221ENST00000581662 THRAP3Q9Y2W1 955 aaKnown RBP11.99□□□□□ -0.49
CDK5RAP3-221ENST00000581662 NUP155O75694 1391 aa11.99□□□□□ -0.49
CDK5RAP3-221ENST00000581662 LRRC37A3O60309 1634 aa11.99□□□□□ -0.49
CDK5RAP3-221ENST00000581662 ANKARQ7Z5J8 1434 aa11.98□□□□□ -0.49
CDK5RAP3-221ENST00000581662 HTRA3P83110 453 aa11.96□□□□□ -0.49
CDK5RAP3-221ENST00000581662 TOPAZ1Q8N9V7 1692 aa11.96□□□□□ -0.5
CDK5RAP3-221ENST00000581662 LMO7Q8WWI1 1683 aa11.96□□□□□ -0.5
CDK5RAP3-221ENST00000581662 PHRF1Q9P1Y6 1649 aaKnown RBP11.96□□□□□ -0.5
CDK5RAP3-221ENST00000581662 RPGRIP1LQ68CZ1 1315 aa11.95□□□□□ -0.5
CDK5RAP3-221ENST00000581662 ACIN1Q9UKV3 1341 aaKnown RBP11.95□□□□□ -0.5
CDK5RAP3-221ENST00000581662 TOMM70O94826 608 aa11.95□□□□□ -0.5
CDK5RAP3-221ENST00000581662 ZNF827Q17R98 1081 aa11.95□□□□□ -0.5
CDK5RAP3-221ENST00000581662 PMFBP1Q8TBY8 1022 aa11.95□□□□□ -0.5
CDK5RAP3-221ENST00000581662 STK26Q9P289 416 aa11.95□□□□□ -0.5
CDK5RAP3-221ENST00000581662 POLD1P28340 1107 aa11.94□□□□□ -0.5
CDK5RAP3-221ENST00000581662 GPHNQ9NQX3 736 aaPredicted RBP11.94□□□□□ -0.5
CDK5RAP3-221ENST00000581662 TULP4Q9NRJ4 1543 aa11.94□□□□□ -0.5
CDK5RAP3-221ENST00000581662 GPRASP1Q5JY77 1395 aa11.93□□□□□ -0.5
CDK5RAP3-221ENST00000581662 PPLO60437 1756 aa11.93□□□□□ -0.5
CDK5RAP3-221ENST00000581662 SPNS2Q8IVW8 549 aa11.93□□□□□ -0.5
CDK5RAP3-221ENST00000581662 SLC16A10Q8TF71 515 aa11.93□□□□□ -0.5
CDK5RAP3-221ENST00000581662 KRTAP3-3Q9BYR6 98 aa11.93□□□□□ -0.5
CDK5RAP3-221ENST00000581662 KRTAP3-2Q9BYR7 98 aa11.93□□□□□ -0.5
CDK5RAP3-221ENST00000581662 PCDHGA4Q9Y5G9 962 aa11.93□□□□□ -0.5
CDK5RAP3-221ENST00000581662 GTPBP6O43824 516 aaPredicted RBP11.92□□□□□ -0.5
CDK5RAP3-221ENST00000581662 NUDT7P0C024 238 aa11.92□□□□□ -0.5
CDK5RAP3-221ENST00000581662 EVA1CP58658 441 aa11.92□□□□□ -0.5
CDK5RAP3-221ENST00000581662 PLPP6Q8IY26 295 aa11.92□□□□□ -0.5
CDK5RAP3-221ENST00000581662 SIRT1Q96EB6 747 aa11.92□□□□□ -0.5
CDK5RAP3-221ENST00000581662 KIF1BO60333 1816 aa11.92□□□□□ -0.5
CDK5RAP3-221ENST00000581662 ARHGEF28Q8N1W1 1705 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-221ENST00000581662 COL5A2P05997 1499 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-221ENST00000581662 ZNF316A6NFI3 1004 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-221ENST00000581662 HSPA1AP0DMV8 641 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-221ENST00000581662 HSPA1BP0DMV9 641 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-221ENST00000581662 ZC3H6P61129 1189 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-221ENST00000581662 MARCH10Q8NA82 808 aaPredicted RBP11.91□□□□□ -0.5
CDK5RAP3-221ENST00000581662 YTHDC2Q9H6S0 1430 aaKnown RBP11.91□□□□□ -0.5
CDK5RAP3-221ENST00000581662 FOXK1P85037 733 aa11.9□□□□□ -0.5
CDK5RAP3-221ENST00000581662 FAM161AQ3B820 660 aa11.9□□□□□ -0.5
CDK5RAP3-221ENST00000581662 CPDO75976 1380 aa11.9□□□□□ -0.5
CDK5RAP3-221ENST00000581662 ROCK1Q13464 1354 aa11.9□□□□□ -0.5
CDK5RAP3-221ENST00000581662 CRB1P82279 1406 aa11.89□□□□□ -0.51
CDK5RAP3-221ENST00000581662 DSG2Q14126 1118 aa11.89□□□□□ -0.51
CDK5RAP3-221ENST00000581662 DDB1Q16531 1140 aa11.89□□□□□ -0.51
CDK5RAP3-221ENST00000581662 AMER1Q5JTC6 1135 aaPredicted RBP11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 101.2 ms