RNA–Protein interactions for RNA: ENST00000581180.1

MKS1-210, Transcript of Meckel syndrome, type 1, humanhuman

TSL 2

Gene MKS1, Length 899 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-210ENST00000581180 U2AF1L5P0DN76 240 aaPredicted RBP20.19■□□□□ 0.82
MKS1-210ENST00000581180 U2AF1Q01081 240 aaKnown RBP eCLIP20.19■□□□□ 0.82
MKS1-210ENST00000581180 MYT1Q01538 1121 aa20.19■□□□□ 0.82
MKS1-210ENST00000581180 DDB1Q16531 1140 aa20.19■□□□□ 0.82
MKS1-210ENST00000581180 EXOC5O00471 708 aa20.18■□□□□ 0.82
MKS1-210ENST00000581180 RSPH6AQ9H0K4 717 aa20.18■□□□□ 0.82
MKS1-210ENST00000581180 KAT6BQ8WYB5 2073 aa20.18■□□□□ 0.82
MKS1-210ENST00000581180 ILDR2Q71H61 639 aa20.17■□□□□ 0.82
MKS1-210ENST00000581180 FCHSD2O94868 740 aa20.16■□□□□ 0.82
MKS1-210ENST00000581180 KRT27Q7Z3Y8 459 aa20.16■□□□□ 0.82
MKS1-210ENST00000581180 ZCRB1Q8TBF4 217 aaKnown RBP20.16■□□□□ 0.82
MKS1-210ENST00000581180 MRS2Q9HD23 443 aa20.16■□□□□ 0.82
MKS1-210ENST00000581180 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.16■□□□□ 0.82
MKS1-210ENST00000581180 MIER1Q8N108 512 aa20.15■□□□□ 0.82
MKS1-210ENST00000581180 SBF2Q86WG5 1849 aa20.15■□□□□ 0.82
MKS1-210ENST00000581180 VIRMAQ69YN4 1812 aaKnown RBP20.14■□□□□ 0.81
MKS1-210ENST00000581180 CCER2I3L3R5 266 aa20.14■□□□□ 0.81
MKS1-210ENST00000581180 PDE3BQ13370 1112 aa20.14■□□□□ 0.81
MKS1-210ENST00000581180 MARCH10Q8NA82 808 aaPredicted RBP20.14■□□□□ 0.81
MKS1-210ENST00000581180 PNISRQ8TF01 805 aaKnown RBP20.14■□□□□ 0.81
MKS1-210ENST00000581180 PRKAR2BP31323 418 aa20.13■□□□□ 0.81
MKS1-210ENST00000581180 WDR43Q15061 677 aaKnown RBP eCLIP20.12■□□□□ 0.81
MKS1-210ENST00000581180 AMOTQ4VCS5 1084 aa20.12■□□□□ 0.81
MKS1-210ENST00000581180 PLEKHO1Q53GL0 409 aaPredicted RBP20.12■□□□□ 0.81
MKS1-210ENST00000581180 PLEKHF1Q96S99 279 aa20.12■□□□□ 0.81
MKS1-210ENST00000581180 ADAMTS8Q9UP79 889 aa20.12■□□□□ 0.81
MKS1-210ENST00000581180 DLG5Q8TDM6 1919 aa20.12■□□□□ 0.81
MKS1-210ENST00000581180 CYP27B1O15528 508 aa20.11■□□□□ 0.81
MKS1-210ENST00000581180 PHACTR3Q96KR7 559 aa20.11■□□□□ 0.81
MKS1-210ENST00000581180 SPG7Q9UQ90 795 aa20.11■□□□□ 0.81
MKS1-210ENST00000581180 PCDH11XQ9BZA7 1347 aa20.1■□□□□ 0.81
MKS1-210ENST00000581180 PCDH11YQ9BZA8 1340 aa20.1■□□□□ 0.81
MKS1-210ENST00000581180 BCL9O00512 1426 aa20.1■□□□□ 0.81
MKS1-210ENST00000581180 FAM182BQ5T319 152 aa20.09■□□□□ 0.81
MKS1-210ENST00000581180 DDX54Q8TDD1 881 aaKnown RBP20.09■□□□□ 0.81
MKS1-210ENST00000581180 MTHFSDQ2M296 383 aaKnown RBP20.08■□□□□ 0.81
MKS1-210ENST00000581180 PHKG2P15735 406 aa20.07■□□□□ 0.8
MKS1-210ENST00000581180 ZNF530Q6P9A1 599 aaPredicted RBP20.07■□□□□ 0.8
MKS1-210ENST00000581180 PNNQ9H307 717 aaKnown RBP20.07■□□□□ 0.8
MKS1-210ENST00000581180 SCN11AQ9UI33 1791 aa20.07■□□□□ 0.8
MKS1-210ENST00000581180 TOGARAM1Q9Y4F4 1720 aa20.07■□□□□ 0.8
MKS1-210ENST00000581180 EP400Q96L91 3159 aa20.07■□□□□ 0.8
MKS1-210ENST00000581180 ITGB4P16144 1822 aa20.06■□□□□ 0.8
MKS1-210ENST00000581180 NKX1-1Q15270 411 aaPredicted RBP20.06■□□□□ 0.8
MKS1-210ENST00000581180 FAM196AQ6ZSG2 479 aa20.06■□□□□ 0.8
MKS1-210ENST00000581180 IFNL2Q8IZJ0 200 aa20.06■□□□□ 0.8
MKS1-210ENST00000581180 DOT1LQ8TEK3 1739 aa20.06■□□□□ 0.8
MKS1-210ENST00000581180 GAS2L2Q8NHY3 880 aa20.05■□□□□ 0.8
MKS1-210ENST00000581180 ADAMTS7Q9UKP4 1686 aa20.05■□□□□ 0.8
MKS1-210ENST00000581180 NHSQ6T4R5 1651 aa20.03■□□□□ 0.8
MKS1-210ENST00000581180 AKAP4Q5JQC9 854 aa20.03■□□□□ 0.8
MKS1-210ENST00000581180 CCDC146Q8IYE0 955 aa20.03■□□□□ 0.8
MKS1-210ENST00000581180 RUNDC1Q96C34 613 aa20.03■□□□□ 0.8
MKS1-210ENST00000581180 KDM6AO15550 1401 aaPredicted RBP20.02■□□□□ 0.79
MKS1-210ENST00000581180 NEFMP07197 916 aa20.01■□□□□ 0.79
MKS1-210ENST00000581180 C1orf141Q5JVX7 400 aa20.01■□□□□ 0.79
MKS1-210ENST00000581180 TNS1Q9HBL0 1735 aaKnown RBP20.01■□□□□ 0.79
MKS1-210ENST00000581180 MAPK8IP3Q9UPT6 1336 aa20.01■□□□□ 0.79
MKS1-210ENST00000581180 HSP90AB1P08238 724 aaKnown RBP20■□□□□ 0.79
MKS1-210ENST00000581180 NFE2L2Q16236 605 aa20■□□□□ 0.79
MKS1-210ENST00000581180 FAM9BQ8IZU0 186 aa20■□□□□ 0.79
MKS1-210ENST00000581180 MAP3K5Q99683 1374 aa19.99■□□□□ 0.79
MKS1-210ENST00000581180 DCAF5Q96JK2 942 aa19.99■□□□□ 0.79
MKS1-210ENST00000581180 BTAF1O14981 1849 aa19.99■□□□□ 0.79
MKS1-210ENST00000581180 GNAT3A8MTJ3 354 aa19.98■□□□□ 0.79
MKS1-210ENST00000581180 MPRIPQ6WCQ1 1025 aa19.98■□□□□ 0.79
MKS1-210ENST00000581180 SIPA1L3O60292 1781 aaPredicted RBP19.98■□□□□ 0.79
MKS1-210ENST00000581180 TMPOP42166 694 aaKnown RBP19.97■□□□□ 0.79
MKS1-210ENST00000581180 ACSBG1Q96GR2 724 aa19.97■□□□□ 0.79
MKS1-210ENST00000581180 RNMTO43148 476 aaKnown RBP19.96■□□□□ 0.79
MKS1-210ENST00000581180 KCNQ2O43526 872 aa19.96■□□□□ 0.79
MKS1-210ENST00000581180 PTF1AQ7RTS3 328 aa19.96■□□□□ 0.79
MKS1-210ENST00000581180 LGR6Q9HBX8 967 aa19.96■□□□□ 0.79
MKS1-210ENST00000581180 MRC1P22897 1456 aa19.95■□□□□ 0.78
MKS1-210ENST00000581180 ERVV-2B6SEH9 535 aa19.95■□□□□ 0.78
MKS1-210ENST00000581180 HTATSF1O43719 755 aaKnown RBP19.95■□□□□ 0.78
MKS1-210ENST00000581180 TRIM37O94972 964 aa19.95■□□□□ 0.78
MKS1-210ENST00000581180 PRIM1P49642 420 aaKnown RBP19.95■□□□□ 0.78
MKS1-210ENST00000581180 IL17REQ8NFR9 667 aa19.95■□□□□ 0.78
MKS1-210ENST00000581180 BCL11BQ9C0K0 894 aaPredicted RBP19.95■□□□□ 0.78
MKS1-210ENST00000581180 CEMIPQ8WUJ3 1361 aa19.95■□□□□ 0.78
MKS1-210ENST00000581180 APAF1O14727 1248 aa19.94■□□□□ 0.78
MKS1-210ENST00000581180 RIPK4P57078 832 aa19.93■□□□□ 0.78
MKS1-210ENST00000581180 UPF1Q92900 1129 aaKnown RBP eCLIP19.93■□□□□ 0.78
MKS1-210ENST00000581180 RRP7AQ9Y3A4 280 aaKnown RBP19.93■□□□□ 0.78
MKS1-210ENST00000581180 CCDC125Q86Z20 511 aa19.91■□□□□ 0.78
MKS1-210ENST00000581180 PIGBQ92521 554 aa19.91■□□□□ 0.78
MKS1-210ENST00000581180 TRIM35Q9UPQ4 493 aa19.91■□□□□ 0.78
MKS1-210ENST00000581180 DCTN1Q14203 1278 aa19.9■□□□□ 0.78
MKS1-210ENST00000581180 MCM10Q7L590 875 aa19.9■□□□□ 0.78
MKS1-210ENST00000581180 RTF1Q92541 710 aaKnown RBP19.9■□□□□ 0.78
MKS1-210ENST00000581180 SYTL4Q96C24 671 aaPredicted RBP19.9■□□□□ 0.78
MKS1-210ENST00000581180 RGPD3A6NKT7 1758 aaPredicted RBP19.9■□□□□ 0.78
MKS1-210ENST00000581180 RGPD4Q7Z3J3 1758 aa19.9■□□□□ 0.78
MKS1-210ENST00000581180 LY75O60449 1722 aa19.89■□□□□ 0.77
MKS1-210ENST00000581180 CABP4P57796 275 aa19.89■□□□□ 0.77
MKS1-210ENST00000581180 NEUROD2Q15784 382 aa19.89■□□□□ 0.77
MKS1-210ENST00000581180 NCBP3Q53F19 620 aaKnown RBP19.89■□□□□ 0.77
MKS1-210ENST00000581180 SLC52A2Q9HAB3 445 aa19.89■□□□□ 0.77
MKS1-210ENST00000581180 TMOD3Q9NYL9 352 aa19.89■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms