RNA–Protein interactions for RNA: ENST00000580838.1

PTPRM-212, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-212ENST00000580838 SVOPQ8N4V2 548 aa8.65□□□□□ -1.02
PTPRM-212ENST00000580838 ZNF784Q8NCA9 323 aaPredicted RBP8.65□□□□□ -1.02
PTPRM-212ENST00000580838 RNF225M0QZC1 329 aaPredicted RBP8.64□□□□□ -1.03
PTPRM-212ENST00000580838 LILRA1O75019 489 aa8.64□□□□□ -1.03
PTPRM-212ENST00000580838 ARHGEF15O94989 841 aa8.64□□□□□ -1.03
PTPRM-212ENST00000580838 RAB15P59190 212 aa8.64□□□□□ -1.03
PTPRM-212ENST00000580838 FOXD4L5Q5VV16 416 aaPredicted RBP8.64□□□□□ -1.03
PTPRM-212ENST00000580838 KDF1Q8NAX2 398 aaPredicted RBP8.64□□□□□ -1.03
PTPRM-212ENST00000580838 ABCC8Q09428 1581 aa8.64□□□□□ -1.03
PTPRM-212ENST00000580838 CEP164Q9UPV0 1460 aa8.64□□□□□ -1.03
PTPRM-212ENST00000580838 KIF21BO75037 1637 aa8.63□□□□□ -1.03
PTPRM-212ENST00000580838 ADH1AP07327 375 aa8.63□□□□□ -1.03
PTPRM-212ENST00000580838 NBPF20Q3BBV1 942 aa8.63□□□□□ -1.03
PTPRM-212ENST00000580838 FAM117AQ9C073 453 aa8.63□□□□□ -1.03
PTPRM-212ENST00000580838 GPBP1L1Q9HC44 474 aaPredicted RBP8.63□□□□□ -1.03
PTPRM-212ENST00000580838 HMX1Q9NP08 348 aaPredicted RBP8.63□□□□□ -1.03
PTPRM-212ENST00000580838 UNC13AQ9UPW8 1703 aa8.63□□□□□ -1.03
PTPRM-212ENST00000580838 ERVH48-1M5A8F1 160 aa8.62□□□□□ -1.03
PTPRM-212ENST00000580838 KDM4CQ9H3R0 1056 aa8.62□□□□□ -1.03
PTPRM-212ENST00000580838 BAZ1BQ9UIG0 1483 aaKnown RBP8.62□□□□□ -1.03
PTPRM-212ENST00000580838 ESPNB1AK53 854 aa8.61□□□□□ -1.03
PTPRM-212ENST00000580838 PTGIRP43119 386 aa8.61□□□□□ -1.03
PTPRM-212ENST00000580838 CUEDC1Q9NWM3 386 aaPredicted RBP8.61□□□□□ -1.03
PTPRM-212ENST00000580838 USP17L8P0C7I0 530 aa8.6□□□□□ -1.03
PTPRM-212ENST00000580838 DZIP3Q86Y13 1208 aaKnown RBP8.6□□□□□ -1.03
PTPRM-212ENST00000580838 ATP1B4Q9UN42 357 aaPredicted RBP8.6□□□□□ -1.03
PTPRM-212ENST00000580838 IRS1P35568 1242 aa8.59□□□□□ -1.03
PTPRM-212ENST00000580838 DDRGK1Q96HY6 314 aa8.59□□□□□ -1.03
PTPRM-212ENST00000580838 ACIN1Q9UKV3 1341 aaKnown RBP8.58□□□□□ -1.04
PTPRM-212ENST00000580838 SOGA1O94964 1423 aa8.58□□□□□ -1.04
PTPRM-212ENST00000580838 ADAMTS2O95450 1211 aa8.58□□□□□ -1.04
PTPRM-212ENST00000580838 UBTFP17480 764 aaKnown RBP8.58□□□□□ -1.04
PTPRM-212ENST00000580838 GAS6Q14393 721 aa8.58□□□□□ -1.04
PTPRM-212ENST00000580838 LYPD4Q6UWN0 246 aa8.58□□□□□ -1.04
PTPRM-212ENST00000580838 PNMA1Q8ND90 353 aa8.58□□□□□ -1.04
PTPRM-212ENST00000580838 DIEXFQ68CQ4 756 aaKnown RBP8.57□□□□□ -1.04
PTPRM-212ENST00000580838 LYSMD3Q7Z3D4 306 aa8.57□□□□□ -1.04
PTPRM-212ENST00000580838 MARSP56192 900 aaKnown RBP8.56□□□□□ -1.04
PTPRM-212ENST00000580838 CYLDQ9NQC7 956 aa8.56□□□□□ -1.04
PTPRM-212ENST00000580838 RNF144AP50876 292 aaPredicted RBP8.55□□□□□ -1.04
PTPRM-212ENST00000580838 SRSF11Q05519 484 aaKnown RBP8.55□□□□□ -1.04
PTPRM-212ENST00000580838 PRICKLE2Q7Z3G6 844 aa8.55□□□□□ -1.04
PTPRM-212ENST00000580838 TRIM34Q9BYJ4 488 aa8.55□□□□□ -1.04
PTPRM-212ENST00000580838 DNMT3AQ9Y6K1 912 aaPredicted RBP8.55□□□□□ -1.04
PTPRM-212ENST00000580838 BICRAQ9NZM4 1560 aa8.54□□□□□ -1.04
PTPRM-212ENST00000580838 RHOQP17081 205 aa8.54□□□□□ -1.04
PTPRM-212ENST00000580838 RFC5P40937 340 aa8.54□□□□□ -1.04
PTPRM-212ENST00000580838 CLIP1P30622 1438 aa8.54□□□□□ -1.04
PTPRM-212ENST00000580838 VPS8Q8N3P4 1428 aa8.54□□□□□ -1.04
PTPRM-212ENST00000580838 CELA2BP08218 269 aaPredicted RBP8.53□□□□□ -1.04
PTPRM-212ENST00000580838 GPAT2Q6NUI2 795 aa8.53□□□□□ -1.04
PTPRM-212ENST00000580838 KANK3Q6NY19 840 aa8.53□□□□□ -1.04
PTPRM-212ENST00000580838 SEPT12Q8IYM1 358 aa8.53□□□□□ -1.04
PTPRM-212ENST00000580838 CLSPNQ9HAW4 1339 aa8.53□□□□□ -1.04
PTPRM-212ENST00000580838 ZNF837Q96EG3 531 aaPredicted RBP8.52□□□□□ -1.05
PTPRM-212ENST00000580838 SCARF2Q96GP6 870 aaPredicted RBP8.52□□□□□ -1.05
PTPRM-212ENST00000580838 ATAD2BQ9ULI0 1458 aa8.51□□□□□ -1.05
PTPRM-212ENST00000580838 GIGYF1O75420 1035 aaPredicted RBP8.51□□□□□ -1.05
PTPRM-212ENST00000580838 TRIM22Q8IYM9 498 aa8.51□□□□□ -1.05
PTPRM-212ENST00000580838 ERICH3Q5RHP9 1530 aa8.5□□□□□ -1.05
PTPRM-212ENST00000580838 ATP5J2-PTCD1G3V325 749 aa8.5□□□□□ -1.05
PTPRM-212ENST00000580838 SYNJ1O43426 1573 aa8.5□□□□□ -1.05
PTPRM-212ENST00000580838 MAP3K10Q02779 954 aa8.5□□□□□ -1.05
PTPRM-212ENST00000580838 GPR25O00155 361 aa8.49□□□□□ -1.05
PTPRM-212ENST00000580838 MEN1O00255 615 aa8.49□□□□□ -1.05
PTPRM-212ENST00000580838 IGHA1P01876 353 aa8.49□□□□□ -1.05
PTPRM-212ENST00000580838 DBN1Q16643 649 aa8.49□□□□□ -1.05
PTPRM-212ENST00000580838 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
PTPRM-212ENST00000580838 TOP2BQ02880 1626 aa8.48□□□□□ -1.05
PTPRM-212ENST00000580838 A0A1W2PRU2 124 aa8.48□□□□□ -1.05
PTPRM-212ENST00000580838 ZBBXA8MT70 800 aa8.48□□□□□ -1.05
PTPRM-212ENST00000580838 GPC1P35052 558 aa8.48□□□□□ -1.05
PTPRM-212ENST00000580838 GMCL1Q96IK5 515 aa8.48□□□□□ -1.05
PTPRM-212ENST00000580838 PCDHB9Q9Y5E1 797 aa8.48□□□□□ -1.05
PTPRM-212ENST00000580838 RUSC2Q8N2Y8 1516 aa8.48□□□□□ -1.05
PTPRM-212ENST00000580838 FBXO45P0C2W1 286 aa8.47□□□□□ -1.05
PTPRM-212ENST00000580838 FOXK2Q01167 660 aa8.47□□□□□ -1.05
PTPRM-212ENST00000580838 RIPOR1Q6ZS17 1223 aa8.47□□□□□ -1.05
PTPRM-212ENST00000580838 IGF1RP08069 1367 aa8.47□□□□□ -1.05
PTPRM-212ENST00000580838 BIVM-ERCC5R4GMW8 1640 aa8.47□□□□□ -1.05
PTPRM-212ENST00000580838 ERVK-9P63128 1117 aa8.46□□□□□ -1.06
PTPRM-212ENST00000580838 POU4F2Q12837 409 aa8.46□□□□□ -1.06
PTPRM-212ENST00000580838 TRIM52Q96A61 297 aa8.46□□□□□ -1.06
PTPRM-212ENST00000580838 GJD4Q96KN9 370 aaPredicted RBP8.46□□□□□ -1.06
PTPRM-212ENST00000580838 ENAMQ9NRM1 1142 aa8.46□□□□□ -1.06
PTPRM-212ENST00000580838 DYRK1BQ9Y463 629 aa8.46□□□□□ -1.06
PTPRM-212ENST00000580838 CNTNAP5Q8WYK1 1306 aa8.46□□□□□ -1.06
PTPRM-212ENST00000580838 TMEM259Q4ZIN3 620 aa8.45□□□□□ -1.06
PTPRM-212ENST00000580838 FOXR1Q6PIV2 292 aa8.45□□□□□ -1.06
PTPRM-212ENST00000580838 GTPBP3Q969Y2 492 aaKnown RBP8.45□□□□□ -1.06
PTPRM-212ENST00000580838 HMGXB3Q12766 1538 aa8.44□□□□□ -1.06
PTPRM-212ENST00000580838 NEUROD1Q13562 356 aa8.44□□□□□ -1.06
PTPRM-212ENST00000580838 CC2D2BQ6DHV5 1058 aa8.44□□□□□ -1.06
PTPRM-212ENST00000580838 ACDQ96AP0 544 aa8.44□□□□□ -1.06
PTPRM-212ENST00000580838 GAS2L1Q99501 681 aaPredicted RBP8.44□□□□□ -1.06
PTPRM-212ENST00000580838 GRIP2Q9C0E4 1043 aa8.44□□□□□ -1.06
PTPRM-212ENST00000580838 BCRP11274 1271 aa8.43□□□□□ -1.06
PTPRM-212ENST00000580838 SCTRP47872 440 aa8.43□□□□□ -1.06
PTPRM-212ENST00000580838 SLC27A3Q5K4L6 730 aa8.43□□□□□ -1.06
PTPRM-212ENST00000580838 NBPF10Q6P3W6 841 aaKnown RBP8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms