RNA–Protein interactions for RNA: ENST00000580798.1

SMG8-205, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

TSL 3

Gene SMG8, Length 583 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-205ENST00000580798 IGF1RP08069 1367 aa8.46□□□□□ -1.06
SMG8-205ENST00000580798 PROCP04070 461 aa8.44□□□□□ -1.06
SMG8-205ENST00000580798 RNF144AP50876 292 aaPredicted RBP8.44□□□□□ -1.06
SMG8-205ENST00000580798 DBN1Q16643 649 aa8.44□□□□□ -1.06
SMG8-205ENST00000580798 TRIM22Q8IYM9 498 aa8.44□□□□□ -1.06
SMG8-205ENST00000580798 BEND7Q8N7W2 519 aaPredicted RBP8.44□□□□□ -1.06
SMG8-205ENST00000580798 EPS8L1Q8TE68 723 aa8.44□□□□□ -1.06
SMG8-205ENST00000580798 GMCL1Q96IK5 515 aa8.44□□□□□ -1.06
SMG8-205ENST00000580798 ESPNB1AK53 854 aa8.43□□□□□ -1.06
SMG8-205ENST00000580798 BCRP11274 1271 aa8.43□□□□□ -1.06
SMG8-205ENST00000580798 NEDD1Q8NHV4 660 aa8.43□□□□□ -1.06
SMG8-205ENST00000580798 PODNQ7Z5L7 613 aa8.42□□□□□ -1.06
SMG8-205ENST00000580798 DZIP3Q86Y13 1208 aaKnown RBP8.42□□□□□ -1.06
SMG8-205ENST00000580798 ACDQ96AP0 544 aa8.42□□□□□ -1.06
SMG8-205ENST00000580798 SLC24A3Q9HC58 644 aa8.42□□□□□ -1.06
SMG8-205ENST00000580798 FOXR1Q6PIV2 292 aa8.41□□□□□ -1.06
SMG8-205ENST00000580798 RIPOR1Q6ZS17 1223 aa8.41□□□□□ -1.06
SMG8-205ENST00000580798 CYLDQ9NQC7 956 aa8.41□□□□□ -1.06
SMG8-205ENST00000580798 PPP2R2DQ66LE6 453 aa8.4□□□□□ -1.06
SMG8-205ENST00000580798 GTPBP3Q969Y2 492 aaKnown RBP8.4□□□□□ -1.06
SMG8-205ENST00000580798 AP1G2O75843 785 aa8.39□□□□□ -1.07
SMG8-205ENST00000580798 SKIV2LQ15477 1246 aaKnown RBP8.39□□□□□ -1.07
SMG8-205ENST00000580798 GALNT6Q8NCL4 622 aa8.39□□□□□ -1.07
SMG8-205ENST00000580798 PROCA1Q8NCQ7 364 aaPredicted RBP8.39□□□□□ -1.07
SMG8-205ENST00000580798 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.39□□□□□ -1.07
SMG8-205ENST00000580798 HMX1Q9NP08 348 aaPredicted RBP8.38□□□□□ -1.07
SMG8-205ENST00000580798 DYRK1BQ9Y463 629 aa8.38□□□□□ -1.07
SMG8-205ENST00000580798 ATP5J2-PTCD1G3V325 749 aa8.37□□□□□ -1.07
SMG8-205ENST00000580798 GPC1P35052 558 aa8.37□□□□□ -1.07
SMG8-205ENST00000580798 SEPT12Q8IYM1 358 aa8.37□□□□□ -1.07
SMG8-205ENST00000580798 LRRC4BQ9NT99 713 aa8.37□□□□□ -1.07
SMG8-205ENST00000580798 H7C1W4 665 aa8.36□□□□□ -1.07
SMG8-205ENST00000580798 MEN1O00255 615 aa8.36□□□□□ -1.07
SMG8-205ENST00000580798 POU4F2Q12837 409 aa8.36□□□□□ -1.07
SMG8-205ENST00000580798 GAS2L1Q99501 681 aaPredicted RBP8.36□□□□□ -1.07
SMG8-205ENST00000580798 A0A1W2PRU2 124 aa8.35□□□□□ -1.07
SMG8-205ENST00000580798 MX2P20592 715 aa8.35□□□□□ -1.07
SMG8-205ENST00000580798 SH3D19Q5HYK7 790 aa8.35□□□□□ -1.07
SMG8-205ENST00000580798 PNMA1Q8ND90 353 aa8.35□□□□□ -1.07
SMG8-205ENST00000580798 TRERF1Q96PN7 1200 aa8.35□□□□□ -1.07
SMG8-205ENST00000580798 K7ELQ4 463 aaPredicted RBP8.34□□□□□ -1.07
SMG8-205ENST00000580798 OIP5O43482 229 aa8.34□□□□□ -1.07
SMG8-205ENST00000580798 SNRPNP63162 240 aaKnown RBP8.34□□□□□ -1.07
SMG8-205ENST00000580798 USP17L8P0C7I0 530 aa8.33□□□□□ -1.08
SMG8-205ENST00000580798 KRBA1A5PL33 1030 aa8.32□□□□□ -1.08
SMG8-205ENST00000580798 GIGYF1O75420 1035 aaPredicted RBP8.32□□□□□ -1.08
SMG8-205ENST00000580798 SLC27A3Q5K4L6 730 aa8.32□□□□□ -1.08
SMG8-205ENST00000580798 TRIM52Q96A61 297 aa8.32□□□□□ -1.08
SMG8-205ENST00000580798 GRIP2Q9C0E4 1043 aa8.32□□□□□ -1.08
SMG8-205ENST00000580798 ATP1B4Q9UN42 357 aaPredicted RBP8.32□□□□□ -1.08
SMG8-205ENST00000580798 NSFL1CQ9UNZ2 370 aaKnown RBP8.32□□□□□ -1.08
SMG8-205ENST00000580798 BAG6P46379 1132 aa8.31□□□□□ -1.08
SMG8-205ENST00000580798 NBPF10Q6P3W6 841 aaKnown RBP8.31□□□□□ -1.08
SMG8-205ENST00000580798 NBPF15Q8N660 670 aa8.31□□□□□ -1.08
SMG8-205ENST00000580798 OXCT2Q9BYC2 517 aaPredicted RBP8.31□□□□□ -1.08
SMG8-205ENST00000580798 NUCKS1Q9H1E3 243 aaKnown RBP8.31□□□□□ -1.08
SMG8-205ENST00000580798 SHISA8B8ZZ34 492 aa8.3□□□□□ -1.08
SMG8-205ENST00000580798 ERVK-9P63128 1117 aa8.3□□□□□ -1.08
SMG8-205ENST00000580798 KRTAP4-8Q9BYQ9 185 aa8.3□□□□□ -1.08
SMG8-205ENST00000580798 SPATA31C2B4DYI2 1134 aa8.29□□□□□ -1.08
SMG8-205ENST00000580798 CC2D2BQ6DHV5 1058 aa8.29□□□□□ -1.08
SMG8-205ENST00000580798 NLRP3Q96P20 1036 aa8.29□□□□□ -1.08
SMG8-205ENST00000580798 F11P03951 625 aa8.28□□□□□ -1.08
SMG8-205ENST00000580798 THBS1P07996 1170 aa8.28□□□□□ -1.08
SMG8-205ENST00000580798 COL8A1P27658 744 aa8.28□□□□□ -1.08
SMG8-205ENST00000580798 MAP2K3P46734 347 aa8.28□□□□□ -1.08
SMG8-205ENST00000580798 CLN3Q13286 438 aa8.28□□□□□ -1.08
SMG8-205ENST00000580798 WDR44Q5JSH3 913 aa8.28□□□□□ -1.08
SMG8-205ENST00000580798 C1orf229Q6ZS94 237 aaPredicted RBP8.28□□□□□ -1.08
SMG8-205ENST00000580798 Q8N3U1 123 aa8.28□□□□□ -1.08
SMG8-205ENST00000580798 TRIM34Q9BYJ4 488 aa8.28□□□□□ -1.08
SMG8-205ENST00000580798 TIMMDC1Q9NPL8 285 aa8.28□□□□□ -1.08
SMG8-205ENST00000580798 PCDHB9Q9Y5E1 797 aa8.28□□□□□ -1.08
SMG8-205ENST00000580798 FURINP09958 794 aa8.27□□□□□ -1.09
SMG8-205ENST00000580798 CFHR5Q9BXR6 569 aa8.27□□□□□ -1.09
SMG8-205ENST00000580798 FAM117AQ9C073 453 aa8.27□□□□□ -1.09
SMG8-205ENST00000580798 MKL2Q9ULH7 1088 aa8.27□□□□□ -1.09
SMG8-205ENST00000580798 WASLO00401 505 aaPredicted RBP8.26□□□□□ -1.09
SMG8-205ENST00000580798 SCTRP47872 440 aa8.26□□□□□ -1.09
SMG8-205ENST00000580798 TAS1R3Q7RTX0 852 aa8.26□□□□□ -1.09
SMG8-205ENST00000580798 ZBBXA8MT70 800 aa8.25□□□□□ -1.09
SMG8-205ENST00000580798 CYP2U1Q7Z449 544 aa8.25□□□□□ -1.09
SMG8-205ENST00000580798 ALYREFQ86V81 257 aaKnown RBP8.25□□□□□ -1.09
SMG8-205ENST00000580798 CCDC125Q86Z20 511 aa8.25□□□□□ -1.09
SMG8-205ENST00000580798 KLRG1Q96E93 195 aa8.25□□□□□ -1.09
SMG8-205ENST00000580798 DDRGK1Q96HY6 314 aa8.25□□□□□ -1.09
SMG8-205ENST00000580798 GPBP1L1Q9HC44 474 aaPredicted RBP8.25□□□□□ -1.09
SMG8-205ENST00000580798 ARHGEF10LQ9HCE6 1279 aa8.25□□□□□ -1.09
SMG8-205ENST00000580798 FBXO45P0C2W1 286 aa8.24□□□□□ -1.09
SMG8-205ENST00000580798 RFC5P40937 340 aa8.24□□□□□ -1.09
SMG8-205ENST00000580798 KDM4CQ9H3R0 1056 aa8.24□□□□□ -1.09
SMG8-205ENST00000580798 EDARADDQ8WWZ3 215 aa8.23□□□□□ -1.09
SMG8-205ENST00000580798 OSBPL3Q9H4L5 887 aa8.23□□□□□ -1.09
SMG8-205ENST00000580798 RRAGCQ9HB90 399 aa8.23□□□□□ -1.09
SMG8-205ENST00000580798 GPAMQ9HCL2 828 aa8.23□□□□□ -1.09
SMG8-205ENST00000580798 TRAK2O60296 914 aa8.22□□□□□ -1.09
SMG8-205ENST00000580798 HOXB4P17483 251 aaPredicted RBP8.22□□□□□ -1.09
SMG8-205ENST00000580798 UBAP2LQ14157 1087 aaKnown RBP8.22□□□□□ -1.09
SMG8-205ENST00000580798 RNF20Q5VTR2 975 aa8.22□□□□□ -1.09
SMG8-205ENST00000580798 SUV39H2Q9H5I1 410 aa8.22□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms