RNA–Protein interactions for RNA: ENST00000580597.2

RN7SL339P-201, Transcript of RNA, 7SL, cytoplasmic 339, pseudogene, humanhuman

BASIC

Gene RN7SL339P, Length 296 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL339P-201ENST00000580597 PIK3CDO00329 1044 aa10.65□□□□□ -0.7
RN7SL339P-201ENST00000580597 TTLL8A6PVC2 850 aa10.64□□□□□ -0.71
RN7SL339P-201ENST00000580597 MYCP01106 439 aaPredicted RBP10.64□□□□□ -0.71
RN7SL339P-201ENST00000580597 INSM2Q96T92 566 aaPredicted RBP10.64□□□□□ -0.71
RN7SL339P-201ENST00000580597 ZNF395Q9H8N7 513 aaPredicted RBP10.64□□□□□ -0.71
RN7SL339P-201ENST00000580597 DNMT3LQ9UJW3 386 aa10.64□□□□□ -0.71
RN7SL339P-201ENST00000580597 CTSOP43234 321 aaPredicted RBP10.63□□□□□ -0.71
RN7SL339P-201ENST00000580597 HDGFL1Q5TGJ6 251 aa10.63□□□□□ -0.71
RN7SL339P-201ENST00000580597 ZNF775Q96BV0 537 aaPredicted RBP10.63□□□□□ -0.71
RN7SL339P-201ENST00000580597 SOBPA7XYQ1 873 aa10.62□□□□□ -0.71
RN7SL339P-201ENST00000580597 MAN1A2O60476 641 aa10.62□□□□□ -0.71
RN7SL339P-201ENST00000580597 USP4Q13107 963 aa10.62□□□□□ -0.71
RN7SL339P-201ENST00000580597 OXLD1Q5BKU9 147 aa10.62□□□□□ -0.71
RN7SL339P-201ENST00000580597 GLMNQ92990 594 aa10.62□□□□□ -0.71
RN7SL339P-201ENST00000580597 UCN2Q96RP3 112 aa10.62□□□□□ -0.71
RN7SL339P-201ENST00000580597 FOXD4L5Q5VV16 416 aaPredicted RBP10.61□□□□□ -0.71
RN7SL339P-201ENST00000580597 RNF217Q8TC41 542 aa10.61□□□□□ -0.71
RN7SL339P-201ENST00000580597 SIRT1Q96EB6 747 aa10.61□□□□□ -0.71
RN7SL339P-201ENST00000580597 ESF1Q9H501 851 aaKnown RBP10.61□□□□□ -0.71
RN7SL339P-201ENST00000580597 GNRH1P01148 92 aa10.6□□□□□ -0.71
RN7SL339P-201ENST00000580597 SKIP12755 728 aa10.6□□□□□ -0.71
RN7SL339P-201ENST00000580597 POLMQ9NP87 494 aaPredicted RBP10.6□□□□□ -0.71
RN7SL339P-201ENST00000580597 A0A1W2PRU2 124 aa10.59□□□□□ -0.71
RN7SL339P-201ENST00000580597 LZTS3O60299 673 aaPredicted RBP10.59□□□□□ -0.71
RN7SL339P-201ENST00000580597 CLN3Q13286 438 aa10.59□□□□□ -0.71
RN7SL339P-201ENST00000580597 ZNF800Q2TB10 664 aaPredicted RBP eCLIP10.59□□□□□ -0.71
RN7SL339P-201ENST00000580597 ARHGEF10LQ9HCE6 1279 aa10.59□□□□□ -0.71
RN7SL339P-201ENST00000580597 GPC1P35052 558 aa10.58□□□□□ -0.72
RN7SL339P-201ENST00000580597 RNF144AP50876 292 aaPredicted RBP10.58□□□□□ -0.72
RN7SL339P-201ENST00000580597 USP17L5A8MUK1 530 aa10.57□□□□□ -0.72
RN7SL339P-201ENST00000580597 NXF1Q9UBU9 619 aaKnown RBP10.57□□□□□ -0.72
RN7SL339P-201ENST00000580597 FIGNL2A6NMB9 653 aa10.56□□□□□ -0.72
RN7SL339P-201ENST00000580597 EML3Q32P44 896 aa10.56□□□□□ -0.72
RN7SL339P-201ENST00000580597 TBC1D9Q6ZT07 1266 aa10.56□□□□□ -0.72
RN7SL339P-201ENST00000580597 PLEKHM2Q8IWE5 1019 aa10.56□□□□□ -0.72
RN7SL339P-201ENST00000580597 NPAS3Q8IXF0 933 aa10.56□□□□□ -0.72
RN7SL339P-201ENST00000580597 MEN1O00255 615 aa10.55□□□□□ -0.72
RN7SL339P-201ENST00000580597 TERTO14746 1132 aaKnown RBP10.55□□□□□ -0.72
RN7SL339P-201ENST00000580597 ATP9BO43861 1147 aa10.55□□□□□ -0.72
RN7SL339P-201ENST00000580597 NFX1Q12986 1120 aaKnown RBP10.55□□□□□ -0.72
RN7SL339P-201ENST00000580597 NCOA4Q13772 614 aa10.55□□□□□ -0.72
RN7SL339P-201ENST00000580597 ZMYND15Q9H091 742 aa10.55□□□□□ -0.72
RN7SL339P-201ENST00000580597 RAB6BQ9NRW1 208 aa10.55□□□□□ -0.72
RN7SL339P-201ENST00000580597 IL2RAP01589 272 aa10.54□□□□□ -0.72
RN7SL339P-201ENST00000580597 CALR3Q96L12 384 aaKnown RBP10.54□□□□□ -0.72
RN7SL339P-201ENST00000580597 NLRP3Q96P20 1036 aa10.54□□□□□ -0.72
RN7SL339P-201ENST00000580597 ESYT1Q9BSJ8 1104 aa10.54□□□□□ -0.72
RN7SL339P-201ENST00000580597 HRH3Q9Y5N1 445 aa10.54□□□□□ -0.72
RN7SL339P-201ENST00000580597 USP17L3A6NCW0 530 aa10.53□□□□□ -0.72
RN7SL339P-201ENST00000580597 USP17L4A6NCW7 530 aa10.53□□□□□ -0.72
RN7SL339P-201ENST00000580597 ESCO1Q5FWF5 840 aa10.53□□□□□ -0.72
RN7SL339P-201ENST00000580597 LCE2AQ5TA79 106 aaPredicted RBP10.53□□□□□ -0.72
RN7SL339P-201ENST00000580597 USP17L2Q6R6M4 530 aa10.53□□□□□ -0.72
RN7SL339P-201ENST00000580597 USP17L1Q7RTZ2 530 aa10.53□□□□□ -0.72
RN7SL339P-201ENST00000580597 LYSMD3Q7Z3D4 306 aa10.53□□□□□ -0.72
RN7SL339P-201ENST00000580597 XAGE2Q96GT9 111 aa10.53□□□□□ -0.72
RN7SL339P-201ENST00000580597 ETNK1Q9HBU6 452 aa10.53□□□□□ -0.72
RN7SL339P-201ENST00000580597 NOD1Q9Y239 953 aa10.53□□□□□ -0.72
RN7SL339P-201ENST00000580597 WASLO00401 505 aaPredicted RBP10.52□□□□□ -0.73
RN7SL339P-201ENST00000580597 SCNN1DP51172 638 aa10.52□□□□□ -0.73
RN7SL339P-201ENST00000580597 PTSQ03393 145 aa10.52□□□□□ -0.73
RN7SL339P-201ENST00000580597 TREML4Q6UXN2 200 aa10.52□□□□□ -0.73
RN7SL339P-201ENST00000580597 CNKSR1Q969H4 720 aa10.52□□□□□ -0.73
RN7SL339P-201ENST00000580597 GRIP2Q9C0E4 1043 aa10.52□□□□□ -0.73
RN7SL339P-201ENST00000580597 PCDHGA11Q9Y5H2 935 aa10.52□□□□□ -0.73
RN7SL339P-201ENST00000580597 H3BM21 787 aa10.51□□□□□ -0.73
RN7SL339P-201ENST00000580597 DEPDC4Q8N2C3 294 aa10.51□□□□□ -0.73
RN7SL339P-201ENST00000580597 STAU1O95793 577 aaKnown RBP10.5□□□□□ -0.73
RN7SL339P-201ENST00000580597 ZNF777Q9ULD5 760 aaPredicted RBP10.5□□□□□ -0.73
RN7SL339P-201ENST00000580597 MAFBQ9Y5Q3 323 aaPredicted RBP10.5□□□□□ -0.73
RN7SL339P-201ENST00000580597 SLC35F4A4IF30 521 aa10.49□□□□□ -0.73
RN7SL339P-201ENST00000580597 WFS1O76024 890 aa10.49□□□□□ -0.73
RN7SL339P-201ENST00000580597 GDF10P55107 478 aa10.49□□□□□ -0.73
RN7SL339P-201ENST00000580597 GTF2IP78347 998 aa10.49□□□□□ -0.73
RN7SL339P-201ENST00000580597 PPP1R12CQ9BZL4 782 aa10.49□□□□□ -0.73
RN7SL339P-201ENST00000580597 FHDC1Q9C0D6 1143 aaPredicted RBP10.49□□□□□ -0.73
RN7SL339P-201ENST00000580597 SENP3-EIF4A1A0A087X0R7 540 aa10.48□□□□□ -0.73
RN7SL339P-201ENST00000580597 PALM3A6NDB9 673 aaPredicted RBP10.48□□□□□ -0.73
RN7SL339P-201ENST00000580597 SPATA31C2B4DYI2 1134 aa10.48□□□□□ -0.73
RN7SL339P-201ENST00000580597 PPFIA3O75145 1194 aa10.48□□□□□ -0.73
RN7SL339P-201ENST00000580597 INHAP05111 366 aa10.48□□□□□ -0.73
RN7SL339P-201ENST00000580597 CENPCQ03188 943 aa10.48□□□□□ -0.73
RN7SL339P-201ENST00000580597 SLC27A3Q5K4L6 730 aa10.48□□□□□ -0.73
RN7SL339P-201ENST00000580597 LCE2CQ5TA81 110 aa10.48□□□□□ -0.73
RN7SL339P-201ENST00000580597 TFIP11Q9UBB9 837 aaKnown RBP10.48□□□□□ -0.73
RN7SL339P-201ENST00000580597 TMEM229AB2RXF0 380 aa10.47□□□□□ -0.73
RN7SL339P-201ENST00000580597 PRICKLE2Q7Z3G6 844 aa10.47□□□□□ -0.73
RN7SL339P-201ENST00000580597 TRIM50Q86XT4 487 aa10.47□□□□□ -0.73
RN7SL339P-201ENST00000580597 SLC16A10Q8TF71 515 aa10.47□□□□□ -0.73
RN7SL339P-201ENST00000580597 VEGFBP49765 207 aa10.46□□□□□ -0.73
RN7SL339P-201ENST00000580597 CCDC155Q8N6L0 562 aa10.46□□□□□ -0.73
RN7SL339P-201ENST00000580597 VSIG8P0DPA2 414 aa10.45□□□□□ -0.74
RN7SL339P-201ENST00000580597 WDR44Q5JSH3 913 aa10.45□□□□□ -0.74
RN7SL339P-201ENST00000580597 ZSCAN10Q96SZ4 725 aaPredicted RBP10.45□□□□□ -0.74
RN7SL339P-201ENST00000580597 RHOQP17081 205 aa10.44□□□□□ -0.74
RN7SL339P-201ENST00000580597 ATP1A2P50993 1020 aa10.44□□□□□ -0.74
RN7SL339P-201ENST00000580597 TLR1Q15399 786 aa10.44□□□□□ -0.74
RN7SL339P-201ENST00000580597 NBPF10Q6P3W6 841 aaKnown RBP10.44□□□□□ -0.74
RN7SL339P-201ENST00000580597 NBPF15Q8N660 670 aa10.44□□□□□ -0.74
RN7SL339P-201ENST00000580597 SLC4A9Q96Q91 983 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms