RNA–Protein interactions for RNA: ENST00000580391.5

CDK5RAP3-218, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 5

Gene CDK5RAP3, Length 1,957 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-218ENST00000580391 ROBO1Q9Y6N7 1651 aa19.15■□□□□ 0.66
CDK5RAP3-218ENST00000580391 FRAT1Q92837 279 aaPredicted RBP19.15■□□□□ 0.66
CDK5RAP3-218ENST00000580391 CRB1P82279 1406 aa19.15■□□□□ 0.66
CDK5RAP3-218ENST00000580391 AEBP2Q6ZN18 517 aaPredicted RBP19.13■□□□□ 0.65
CDK5RAP3-218ENST00000580391 ERBB3P21860 1342 aa19.13■□□□□ 0.65
CDK5RAP3-218ENST00000580391 SSH1Q8WYL5 1049 aa19.13■□□□□ 0.65
CDK5RAP3-218ENST00000580391 SMC4Q9NTJ3 1288 aa19.13■□□□□ 0.65
CDK5RAP3-218ENST00000580391 TNNQ9UQP3 1299 aa19.13■□□□□ 0.65
CDK5RAP3-218ENST00000580391 MAP3K5Q99683 1374 aa19.13■□□□□ 0.65
CDK5RAP3-218ENST00000580391 KIAA0232Q92628 1395 aa19.12■□□□□ 0.65
CDK5RAP3-218ENST00000580391 TSPYL6Q8N831 410 aa19.12■□□□□ 0.65
CDK5RAP3-218ENST00000580391 RTF1Q92541 710 aaKnown RBP19.12■□□□□ 0.65
CDK5RAP3-218ENST00000580391 PDE3AQ14432 1141 aa19.11■□□□□ 0.65
CDK5RAP3-218ENST00000580391 PANK1Q8TE04 598 aa19.11■□□□□ 0.65
CDK5RAP3-218ENST00000580391 CHRNA2Q15822 529 aa19.1■□□□□ 0.65
CDK5RAP3-218ENST00000580391 CPDO75976 1380 aa19.1■□□□□ 0.65
CDK5RAP3-218ENST00000580391 GNAT3A8MTJ3 354 aa19.09■□□□□ 0.65
CDK5RAP3-218ENST00000580391 CHL1O00533 1208 aa19.08■□□□□ 0.65
CDK5RAP3-218ENST00000580391 RLBP1P12271 317 aa19.08■□□□□ 0.65
CDK5RAP3-218ENST00000580391 C8orf58Q8NAV2 365 aa19.08■□□□□ 0.65
CDK5RAP3-218ENST00000580391 ELL2O00472 640 aaPredicted RBP19.08■□□□□ 0.64
CDK5RAP3-218ENST00000580391 VAMP4O75379 141 aa19.08■□□□□ 0.64
CDK5RAP3-218ENST00000580391 AHDC1Q5TGY3 1603 aaPredicted RBP19.07■□□□□ 0.64
CDK5RAP3-218ENST00000580391 HTATSF1O43719 755 aaKnown RBP19.07■□□□□ 0.64
CDK5RAP3-218ENST00000580391 TWISTNBQ3B726 338 aaPredicted RBP19.07■□□□□ 0.64
CDK5RAP3-218ENST00000580391 COG6Q9Y2V7 657 aa19.07■□□□□ 0.64
CDK5RAP3-218ENST00000580391 ALDH1L2Q3SY69 923 aa19.06■□□□□ 0.64
CDK5RAP3-218ENST00000580391 KRT24Q2M2I5 525 aa19.06■□□□□ 0.64
CDK5RAP3-218ENST00000580391 ZKSCAN2Q63HK3 967 aa19.06■□□□□ 0.64
CDK5RAP3-218ENST00000580391 CLUAP1Q96AJ1 413 aa19.06■□□□□ 0.64
CDK5RAP3-218ENST00000580391 IL17REQ8NFR9 667 aa19.05■□□□□ 0.64
CDK5RAP3-218ENST00000580391 ZNF428Q96B54 188 aa19.05■□□□□ 0.64
CDK5RAP3-218ENST00000580391 MIS18AQ9NYP9 233 aa19.05■□□□□ 0.64
CDK5RAP3-218ENST00000580391 KIF16BQ96L93 1317 aa19.05■□□□□ 0.64
CDK5RAP3-218ENST00000580391 KDM3BQ7LBC6 1761 aa19.04■□□□□ 0.64
CDK5RAP3-218ENST00000580391 NLRP2Q9NX02 1062 aa19.04■□□□□ 0.64
CDK5RAP3-218ENST00000580391 TRIM27P14373 513 aa19.03■□□□□ 0.64
CDK5RAP3-218ENST00000580391 ZNF530Q6P9A1 599 aaPredicted RBP19.03■□□□□ 0.64
CDK5RAP3-218ENST00000580391 TSPYL4Q9UJ04 414 aa19.03■□□□□ 0.64
CDK5RAP3-218ENST00000580391 NOB1Q9ULX3 412 aaKnown RBP19.03■□□□□ 0.64
CDK5RAP3-218ENST00000580391 MEGF6O75095 1541 aa19.03■□□□□ 0.64
CDK5RAP3-218ENST00000580391 PKD1L3Q7Z443 1732 aa19.03■□□□□ 0.64
CDK5RAP3-218ENST00000580391 PRDM11Q9NQV5 511 aa19.02■□□□□ 0.64
CDK5RAP3-218ENST00000580391 CEMIPQ8WUJ3 1361 aa19.02■□□□□ 0.64
CDK5RAP3-218ENST00000580391 ADAMTS7Q9UKP4 1686 aa19.02■□□□□ 0.64
CDK5RAP3-218ENST00000580391 TCERG1O14776 1098 aaKnown RBP19.02■□□□□ 0.64
CDK5RAP3-218ENST00000580391 CSB-PGBD3P0DP91 1061 aa19.02■□□□□ 0.64
CDK5RAP3-218ENST00000580391 HAP1P54257 671 aaPredicted RBP19.02■□□□□ 0.64
CDK5RAP3-218ENST00000580391 PLEKHO1Q53GL0 409 aaPredicted RBP19.02■□□□□ 0.64
CDK5RAP3-218ENST00000580391 SIPA1L3O60292 1781 aaPredicted RBP19.02■□□□□ 0.63
CDK5RAP3-218ENST00000580391 ATF7IPQ6VMQ6 1270 aa19.01■□□□□ 0.63
CDK5RAP3-218ENST00000580391 FTSJ3Q8IY81 847 aaKnown RBP19.01■□□□□ 0.63
CDK5RAP3-218ENST00000580391 MRPL50Q8N5N7 158 aaKnown RBP19.01■□□□□ 0.63
CDK5RAP3-218ENST00000580391 COL22A1Q8NFW1 1626 aaPredicted RBP19.01■□□□□ 0.63
CDK5RAP3-218ENST00000580391 COL5A2P05997 1499 aaPredicted RBP19.01■□□□□ 0.63
CDK5RAP3-218ENST00000580391 AMOTQ4VCS5 1084 aa19.01■□□□□ 0.63
CDK5RAP3-218ENST00000580391 DZIP1LQ8IYY4 767 aaKnown RBP19.01■□□□□ 0.63
CDK5RAP3-218ENST00000580391 PHLPP1O60346 1717 aa19■□□□□ 0.63
CDK5RAP3-218ENST00000580391 BRPF1P55201 1214 aaPredicted RBP19■□□□□ 0.63
CDK5RAP3-218ENST00000580391 AKAP4Q5JQC9 854 aa19■□□□□ 0.63
CDK5RAP3-218ENST00000580391 SCN11AQ9UI33 1791 aa19■□□□□ 0.63
CDK5RAP3-218ENST00000580391 PARP4Q9UKK3 1724 aaKnown RBP19■□□□□ 0.63
CDK5RAP3-218ENST00000580391 LGR6Q9HBX8 967 aa18.99■□□□□ 0.63
CDK5RAP3-218ENST00000580391 TSHZ2Q9NRE2 1034 aa18.99■□□□□ 0.63
CDK5RAP3-218ENST00000580391 MVPQ14764 893 aaKnown RBP18.98■□□□□ 0.63
CDK5RAP3-218ENST00000580391 COL16A1Q07092 1604 aaPredicted RBP18.98■□□□□ 0.63
CDK5RAP3-218ENST00000580391 KDM2BQ8NHM5 1336 aa18.98■□□□□ 0.63
CDK5RAP3-218ENST00000580391 RAPGEF4Q8WZA2 1011 aa18.97■□□□□ 0.63
CDK5RAP3-218ENST00000580391 MS4A1P11836 297 aa18.97■□□□□ 0.63
CDK5RAP3-218ENST00000580391 C1orf141Q5JVX7 400 aa18.97■□□□□ 0.63
CDK5RAP3-218ENST00000580391 OVOS2A0A0G2JMS6 1433 aa18.96■□□□□ 0.63
CDK5RAP3-218ENST00000580391 IPO8O15397 1037 aaKnown RBP18.96■□□□□ 0.63
CDK5RAP3-218ENST00000580391 TAF7Q15545 349 aaPredicted RBP18.96■□□□□ 0.63
CDK5RAP3-218ENST00000580391 MPRIPQ6WCQ1 1025 aa18.96■□□□□ 0.63
CDK5RAP3-218ENST00000580391 WDR17Q8IZU2 1322 aa18.95■□□□□ 0.62
CDK5RAP3-218ENST00000580391 CACNA1FO60840 1977 aa18.95■□□□□ 0.62
CDK5RAP3-218ENST00000580391 TATP17735 454 aaPredicted RBP18.95■□□□□ 0.62
CDK5RAP3-218ENST00000580391 TMEM57Q8N5G2 664 aa18.95■□□□□ 0.62
CDK5RAP3-218ENST00000580391 COL14A1Q05707 1796 aaKnown RBP18.94■□□□□ 0.62
CDK5RAP3-218ENST00000580391 RNMTO43148 476 aaKnown RBP18.93■□□□□ 0.62
CDK5RAP3-218ENST00000580391 ITPRIPQ8IWB1 547 aa18.93■□□□□ 0.62
CDK5RAP3-218ENST00000580391 SHANK3Q9BYB0 1731 aa18.93■□□□□ 0.62
CDK5RAP3-218ENST00000580391 BABAM1Q9NWV8 329 aa18.93■□□□□ 0.62
CDK5RAP3-218ENST00000580391 KDM6AO15550 1401 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP3-218ENST00000580391 PLEKHG2Q9H7P9 1386 aa18.92■□□□□ 0.62
CDK5RAP3-218ENST00000580391 CENPQQ7L2Z9 268 aaPredicted RBP18.92■□□□□ 0.62
CDK5RAP3-218ENST00000580391 TEFQ10587 303 aa18.92■□□□□ 0.62
CDK5RAP3-218ENST00000580391 ARHGAP45Q92619 1136 aa18.92■□□□□ 0.62
CDK5RAP3-218ENST00000580391 RGS12O14924 1447 aa18.91■□□□□ 0.62
CDK5RAP3-218ENST00000580391 ABCC4O15439 1325 aa18.91■□□□□ 0.62
CDK5RAP3-218ENST00000580391 TOM1L2Q6ZVM7 507 aa18.91■□□□□ 0.62
CDK5RAP3-218ENST00000580391 DDX19BQ9UMR2 479 aa18.9■□□□□ 0.62
CDK5RAP3-218ENST00000580391 PLCH1Q4KWH8 1693 aa18.9■□□□□ 0.62
CDK5RAP3-218ENST00000580391 AAMPQ13685 434 aa18.9■□□□□ 0.62
CDK5RAP3-218ENST00000580391 SKAP1Q86WV1 359 aa18.9■□□□□ 0.62
CDK5RAP3-218ENST00000580391 STRN4Q9NRL3 753 aa18.9■□□□□ 0.62
CDK5RAP3-218ENST00000580391 SPG7Q9UQ90 795 aa18.9■□□□□ 0.62
CDK5RAP3-218ENST00000580391 PCDHB15Q9Y5E8 787 aa18.9■□□□□ 0.62
CDK5RAP3-218ENST00000580391 PHKG2P15735 406 aa18.89■□□□□ 0.61
CDK5RAP3-218ENST00000580391 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.89■□□□□ 0.618e-10■□□□□ 11
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms