RNA–Protein interactions for RNA: ENST00000579727.5

RARA-209, Transcript of retinoic acid receptor alpha, humanhuman

TSL 4

Gene RARA, Length 564 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-209ENST00000579727 EYA1Q99502 592 aa22.18■■□□□ 1.14
RARA-209ENST00000579727 NUP188Q5SRE5 1749 aa22.17■■□□□ 1.14
RARA-209ENST00000579727 MTHFSP49914 203 aa22.17■■□□□ 1.14
RARA-209ENST00000579727 NCAPD2Q15021 1401 aa22.16■■□□□ 1.14
RARA-209ENST00000579727 DDX54Q8TDD1 881 aaKnown RBP22.16■■□□□ 1.14
RARA-209ENST00000579727 RAPGEF4Q8WZA2 1011 aa22.16■■□□□ 1.14
RARA-209ENST00000579727 TATP17735 454 aaPredicted RBP22.15■■□□□ 1.14
RARA-209ENST00000579727 PKD1L3Q7Z443 1732 aa22.14■■□□□ 1.13
RARA-209ENST00000579727 DOT1LQ8TEK3 1739 aa22.13■■□□□ 1.13
RARA-209ENST00000579727 NHSQ6T4R5 1651 aa22.12■■□□□ 1.13
RARA-209ENST00000579727 PTF1AQ7RTS3 328 aa22.12■■□□□ 1.13
RARA-209ENST00000579727 ZCRB1Q8TBF4 217 aaKnown RBP22.12■■□□□ 1.13
RARA-209ENST00000579727 ACSBG1Q96GR2 724 aa22.12■■□□□ 1.13
RARA-209ENST00000579727 CAMKK2Q96RR4 588 aa22.12■■□□□ 1.13
RARA-209ENST00000579727 IGSF1Q8N6C5 1336 aa22.11■■□□□ 1.13
RARA-209ENST00000579727 APBA3O96018 575 aa22.1■■□□□ 1.13
RARA-209ENST00000579727 COL3A1P02461 1466 aaPredicted RBP22.09■■□□□ 1.13
RARA-209ENST00000579727 IL13P35225 146 aa22.09■■□□□ 1.13
RARA-209ENST00000579727 AEBP1Q8IUX7 1158 aa22.09■■□□□ 1.13
RARA-209ENST00000579727 BCL9O00512 1426 aa22.08■■□□□ 1.13
RARA-209ENST00000579727 PPP2R1AP30153 589 aa22.08■■□□□ 1.13
RARA-209ENST00000579727 KAT6BQ8WYB5 2073 aa22.07■■□□□ 1.12
RARA-209ENST00000579727 KCNQ2O43526 872 aa22.07■■□□□ 1.12
RARA-209ENST00000579727 BTAF1O14981 1849 aa22.06■■□□□ 1.12
RARA-209ENST00000579727 PARD3Q8TEW0 1356 aa22.05■■□□□ 1.12
RARA-209ENST00000579727 SULT6B1Q6IMI4 303 aa22.05■■□□□ 1.12
RARA-209ENST00000579727 TOGARAM1Q9Y4F4 1720 aa22.05■■□□□ 1.12
RARA-209ENST00000579727 PCDH11XQ9BZA7 1347 aa22.05■■□□□ 1.12
RARA-209ENST00000579727 PCDH11YQ9BZA8 1340 aa22.05■■□□□ 1.12
RARA-209ENST00000579727 DIAPH1O60610 1272 aaKnown RBP22.04■■□□□ 1.12
RARA-209ENST00000579727 BCL11BQ9C0K0 894 aaPredicted RBP22.04■■□□□ 1.12
RARA-209ENST00000579727 CYP27B1O15528 508 aa22.03■■□□□ 1.12
RARA-209ENST00000579727 ZNF316A6NFI3 1004 aaPredicted RBP22.02■■□□□ 1.12
RARA-209ENST00000579727 HMOX1P09601 288 aa22.02■■□□□ 1.12
RARA-209ENST00000579727 U2SURPO15042 1029 aaKnown RBP22.01■■□□□ 1.11
RARA-209ENST00000579727 SYTL4Q96C24 671 aaPredicted RBP22.01■■□□□ 1.11
RARA-209ENST00000579727 SPG7Q9UQ90 795 aa22.01■■□□□ 1.11
RARA-209ENST00000579727 RGPD3A6NKT7 1758 aaPredicted RBP22.01■■□□□ 1.11
RARA-209ENST00000579727 RGPD4Q7Z3J3 1758 aa22.01■■□□□ 1.11
RARA-209ENST00000579727 CFAP53Q96M91 514 aa22■■□□□ 1.11
RARA-209ENST00000579727 KDRP35968 1356 aa21.99■■□□□ 1.11
RARA-209ENST00000579727 PRIM1P49642 420 aaKnown RBP21.98■■□□□ 1.11
RARA-209ENST00000579727 ITGB4P16144 1822 aa21.98■■□□□ 1.11
RARA-209ENST00000579727 PHKG2P15735 406 aa21.95■■□□□ 1.1
RARA-209ENST00000579727 PLEKHO1Q53GL0 409 aaPredicted RBP21.95■■□□□ 1.1
RARA-209ENST00000579727 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP21.95■■□□□ 1.1
RARA-209ENST00000579727 ZNF530Q6P9A1 599 aaPredicted RBP21.94■■□□□ 1.1
RARA-209ENST00000579727 IFNL2Q8IZJ0 200 aa21.94■■□□□ 1.1
RARA-209ENST00000579727 CASZ1Q86V15 1759 aa21.94■■□□□ 1.1
RARA-209ENST00000579727 PLSCR1O15162 318 aa21.93■■□□□ 1.1
RARA-209ENST00000579727 PPP1R1BQ9UD71 204 aaPredicted RBP21.93■■□□□ 1.1
RARA-209ENST00000579727 PLEKHG2Q9H7P9 1386 aa21.92■■□□□ 1.1
RARA-209ENST00000579727 RALBP1Q15311 655 aa21.92■■□□□ 1.1
RARA-209ENST00000579727 SPON1Q9HCB6 807 aa21.92■■□□□ 1.1
RARA-209ENST00000579727 CHD4Q14839 1912 aa21.92■■□□□ 1.1
RARA-209ENST00000579727 AMOTQ4VCS5 1084 aa21.91■■□□□ 1.1
RARA-209ENST00000579727 NBPF14Q5TI25 921 aa21.91■■□□□ 1.1
RARA-209ENST00000579727 VIRMAQ69YN4 1812 aaKnown RBP21.91■■□□□ 1.1
RARA-209ENST00000579727 NKX1-1Q15270 411 aaPredicted RBP21.9■■□□□ 1.1
RARA-209ENST00000579727 MPRIPQ6WCQ1 1025 aa21.9■■□□□ 1.1
RARA-209ENST00000579727 PROM2Q8N271 834 aa21.9■■□□□ 1.1
RARA-209ENST00000579727 LY75O60449 1722 aa21.89■■□□□ 1.1
RARA-209ENST00000579727 U2AF1L5P0DN76 240 aaPredicted RBP21.89■■□□□ 1.09
RARA-209ENST00000579727 U2AF1Q01081 240 aaKnown RBP eCLIP21.89■■□□□ 1.09
RARA-209ENST00000579727 TXNRD1Q16881 649 aa21.89■■□□□ 1.09
RARA-209ENST00000579727 NUDCQ9Y266 331 aa21.89■■□□□ 1.09
RARA-209ENST00000579727 KDM6AO15550 1401 aaPredicted RBP21.89■■□□□ 1.09
RARA-209ENST00000579727 MYBBP1AQ9BQG0 1328 aaKnown RBP21.88■■□□□ 1.09
RARA-209ENST00000579727 C1orf141Q5JVX7 400 aa21.88■■□□□ 1.09
RARA-209ENST00000579727 SCN11AQ9UI33 1791 aa21.87■■□□□ 1.09
RARA-209ENST00000579727 DCAF8L1A6NGE4 600 aa21.86■■□□□ 1.09
RARA-209ENST00000579727 PRKAR2BP31323 418 aa21.86■■□□□ 1.09
RARA-209ENST00000579727 MTHFSDQ2M296 383 aaKnown RBP21.86■■□□□ 1.09
RARA-209ENST00000579727 PRKRIP1Q9H875 184 aaPredicted RBP21.86■■□□□ 1.09
RARA-209ENST00000579727 KCNQ4P56696 695 aa21.85■■□□□ 1.09
RARA-209ENST00000579727 PIGBQ92521 554 aa21.85■■□□□ 1.09
RARA-209ENST00000579727 RSPH6AQ9H0K4 717 aa21.85■■□□□ 1.09
RARA-209ENST00000579727 PAPPAQ13219 1627 aa21.84■■□□□ 1.09
RARA-209ENST00000579727 ZNF784Q8NCA9 323 aaPredicted RBP21.84■■□□□ 1.09
RARA-209ENST00000579727 ANO8Q9HCE9 1232 aaPredicted RBP21.84■■□□□ 1.09
RARA-209ENST00000579727 TMOD3Q9NYL9 352 aa21.84■■□□□ 1.09
RARA-209ENST00000579727 HSP90AB1P08238 724 aaKnown RBP21.83■■□□□ 1.09
RARA-209ENST00000579727 AKAP4Q5JQC9 854 aa21.83■■□□□ 1.09
RARA-209ENST00000579727 DCAF5Q96JK2 942 aa21.83■■□□□ 1.09
RARA-209ENST00000579727 PHACTR3Q96KR7 559 aa21.82■■□□□ 1.08
RARA-209ENST00000579727 LRRC4BQ9NT99 713 aa21.82■■□□□ 1.08
RARA-209ENST00000579727 PALLDQ8WX93 1383 aa21.82■■□□□ 1.08
RARA-209ENST00000579727 UTRNP46939 3433 aa21.82■■□□□ 1.08
RARA-209ENST00000579727 PDGFDQ9GZP0 370 aaPredicted RBP21.8■■□□□ 1.08
RARA-209ENST00000579727 C5P01031 1676 aa21.79■■□□□ 1.08
RARA-209ENST00000579727 ADAMTS7Q9UKP4 1686 aa21.79■■□□□ 1.08
RARA-209ENST00000579727 LGR6Q9HBX8 967 aa21.79■■□□□ 1.08
RARA-209ENST00000579727 CCNL1Q9UK58 526 aaPredicted RBP21.79■■□□□ 1.08
RARA-209ENST00000579727 ERVV-2B6SEH9 535 aa21.78■■□□□ 1.08
RARA-209ENST00000579727 CABP4P57796 275 aa21.78■■□□□ 1.08
RARA-209ENST00000579727 ASAP1Q9ULH1 1129 aa21.78■■□□□ 1.08
RARA-209ENST00000579727 TAF1LQ8IZX4 1826 aa21.78■■□□□ 1.08
RARA-209ENST00000579727 MAP3K5Q99683 1374 aa21.77■■□□□ 1.08
RARA-209ENST00000579727 SENP3-EIF4A1A0A087X0R7 540 aa21.77■■□□□ 1.08
RARA-209ENST00000579727 FCHSD2O94868 740 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms