RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 FOXD4L5Q5VV16 416 aaPredicted RBP9.55□□□□□ -0.88
COPS3-216ENST00000579716 ADAM32Q8TC27 787 aa9.55□□□□□ -0.88
COPS3-216ENST00000579716 PKNOX2Q96KN3 472 aa9.55□□□□□ -0.88
COPS3-216ENST00000579716 HMX1Q9NP08 348 aaPredicted RBP9.55□□□□□ -0.88
COPS3-216ENST00000579716 ZBTB33Q86T24 672 aa9.53□□□□□ -0.88
COPS3-216ENST00000579716 ZNF784Q8NCA9 323 aaPredicted RBP9.53□□□□□ -0.88
COPS3-216ENST00000579716 SLC10A4Q96EP9 437 aa9.53□□□□□ -0.88
COPS3-216ENST00000579716 GAS6Q14393 721 aa9.52□□□□□ -0.89
COPS3-216ENST00000579716 CDV3Q9UKY7 258 aaKnown RBP9.52□□□□□ -0.89
COPS3-216ENST00000579716 ERVH48-1M5A8F1 160 aa9.51□□□□□ -0.89
COPS3-216ENST00000579716 BRPF1P55201 1214 aaPredicted RBP9.51□□□□□ -0.89
COPS3-216ENST00000579716 DHX9Q08211 1270 aaKnown RBP9.51□□□□□ -0.89
COPS3-216ENST00000579716 LYPD4Q6UWN0 246 aa9.51□□□□□ -0.89
COPS3-216ENST00000579716 SV2AQ7L0J3 742 aa9.51□□□□□ -0.89
COPS3-216ENST00000579716 FAM117AQ9C073 453 aa9.51□□□□□ -0.89
COPS3-216ENST00000579716 ZC3H4Q9UPT8 1303 aaKnown RBP9.51□□□□□ -0.89
COPS3-216ENST00000579716 ESPNB1AK53 854 aa9.5□□□□□ -0.89
COPS3-216ENST00000579716 SVOPQ8N4V2 548 aa9.5□□□□□ -0.89
COPS3-216ENST00000579716 GPBP1L1Q9HC44 474 aaPredicted RBP9.5□□□□□ -0.89
COPS3-216ENST00000579716 GPSM3Q9Y4H4 160 aa9.5□□□□□ -0.89
COPS3-216ENST00000579716 CDC14CA4D256 554 aa9.49□□□□□ -0.89
COPS3-216ENST00000579716 PTGIRP43119 386 aa9.49□□□□□ -0.89
COPS3-216ENST00000579716 PTK2Q05397 1052 aa9.49□□□□□ -0.89
COPS3-216ENST00000579716 SH3D19Q5HYK7 790 aa9.49□□□□□ -0.89
COPS3-216ENST00000579716 ADH1AP07327 375 aa9.48□□□□□ -0.89
COPS3-216ENST00000579716 IRS1P35568 1242 aa9.48□□□□□ -0.89
COPS3-216ENST00000579716 POLMQ9NP87 494 aaPredicted RBP9.48□□□□□ -0.89
COPS3-216ENST00000579716 ADAMTS2O95450 1211 aa9.47□□□□□ -0.89
COPS3-216ENST00000579716 RAD21O60216 631 aa9.46□□□□□ -0.9
COPS3-216ENST00000579716 AP1G2O75843 785 aa9.46□□□□□ -0.9
COPS3-216ENST00000579716 RAB15P59190 212 aa9.45□□□□□ -0.9
COPS3-216ENST00000579716 TRIM34Q9BYJ4 488 aa9.45□□□□□ -0.9
COPS3-216ENST00000579716 KDM4CQ9H3R0 1056 aa9.45□□□□□ -0.9
COPS3-216ENST00000579716 ITGB2P05107 769 aa9.44□□□□□ -0.9
COPS3-216ENST00000579716 CELA2BP08218 269 aaPredicted RBP9.44□□□□□ -0.9
COPS3-216ENST00000579716 SRSF11Q05519 484 aaKnown RBP9.43□□□□□ -0.9
COPS3-216ENST00000579716 CLSTN1O94985 981 aa9.42□□□□□ -0.9
COPS3-216ENST00000579716 USP17L8P0C7I0 530 aa9.42□□□□□ -0.9
COPS3-216ENST00000579716 RNF144AP50876 292 aaPredicted RBP9.42□□□□□ -0.9
COPS3-216ENST00000579716 DBN1Q16643 649 aa9.42□□□□□ -0.9
COPS3-216ENST00000579716 DNMT3AQ9Y6K1 912 aaPredicted RBP9.42□□□□□ -0.9
COPS3-216ENST00000579716 RNF225M0QZC1 329 aaPredicted RBP9.41□□□□□ -0.9
COPS3-216ENST00000579716 RHOQP17081 205 aa9.41□□□□□ -0.9
COPS3-216ENST00000579716 FGD1P98174 961 aa9.41□□□□□ -0.9
COPS3-216ENST00000579716 NBPF20Q3BBV1 942 aa9.41□□□□□ -0.9
COPS3-216ENST00000579716 GPAT2Q6NUI2 795 aa9.41□□□□□ -0.9
COPS3-216ENST00000579716 LYSMD3Q7Z3D4 306 aa9.41□□□□□ -0.9
COPS3-216ENST00000579716 PRICKLE2Q7Z3G6 844 aa9.41□□□□□ -0.9
COPS3-216ENST00000579716 DZIP3Q86Y13 1208 aaKnown RBP9.4□□□□□ -0.9
COPS3-216ENST00000579716 RGS22Q8NE09 1264 aa9.4□□□□□ -0.9
COPS3-216ENST00000579716 ZNF837Q96EG3 531 aaPredicted RBP9.4□□□□□ -0.9
COPS3-216ENST00000579716 CYLDQ9NQC7 956 aa9.4□□□□□ -0.9
COPS3-216ENST00000579716 GIGYF1O75420 1035 aaPredicted RBP9.39□□□□□ -0.91
COPS3-216ENST00000579716 TICAM2Q86XR7 235 aa9.39□□□□□ -0.91
COPS3-216ENST00000579716 RFC5P40937 340 aa9.38□□□□□ -0.91
COPS3-216ENST00000579716 NEUROD2Q15784 382 aa9.38□□□□□ -0.91
COPS3-216ENST00000579716 CNTNAP5Q8WYK1 1306 aa9.37□□□□□ -0.91
COPS3-216ENST00000579716 GPR25O00155 361 aa9.37□□□□□ -0.91
COPS3-216ENST00000579716 MARSP56192 900 aaKnown RBP9.37□□□□□ -0.91
COPS3-216ENST00000579716 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.37□□□□□ -0.91
COPS3-216ENST00000579716 KANK3Q6NY19 840 aa9.36□□□□□ -0.91
COPS3-216ENST00000579716 TRIM22Q8IYM9 498 aa9.36□□□□□ -0.91
COPS3-216ENST00000579716 PSMD1Q99460 953 aa9.36□□□□□ -0.91
COPS3-216ENST00000579716 RBM25P49756 843 aaKnown RBP9.35□□□□□ -0.91
COPS3-216ENST00000579716 SEPT12Q8IYM1 358 aa9.35□□□□□ -0.91
COPS3-216ENST00000579716 DDRGK1Q96HY6 314 aa9.35□□□□□ -0.91
COPS3-216ENST00000579716 GJD4Q96KN9 370 aaPredicted RBP9.35□□□□□ -0.91
COPS3-216ENST00000579716 C1orf115Q9H7X2 142 aa9.35□□□□□ -0.91
COPS3-216ENST00000579716 A0A1W2PRU2 124 aa9.34□□□□□ -0.91
COPS3-216ENST00000579716 THBS1P07996 1170 aa9.34□□□□□ -0.91
COPS3-216ENST00000579716 ACDQ96AP0 544 aa9.34□□□□□ -0.91
COPS3-216ENST00000579716 SCARF2Q96GP6 870 aaPredicted RBP9.34□□□□□ -0.91
COPS3-216ENST00000579716 MTMR7Q9Y216 660 aa9.34□□□□□ -0.91
COPS3-216ENST00000579716 IGHA1P01876 353 aa9.33□□□□□ -0.92
COPS3-216ENST00000579716 FBXO45P0C2W1 286 aa9.33□□□□□ -0.92
COPS3-216ENST00000579716 POU4F2Q12837 409 aa9.33□□□□□ -0.92
COPS3-216ENST00000579716 GRIP2Q9C0E4 1043 aa9.33□□□□□ -0.92
COPS3-216ENST00000579716 MBIPQ9NS73 344 aa9.33□□□□□ -0.92
COPS3-216ENST00000579716 IGF1RP08069 1367 aa9.33□□□□□ -0.92
COPS3-216ENST00000579716 ATP5J2-PTCD1G3V325 749 aa9.32□□□□□ -0.92
COPS3-216ENST00000579716 GPR37L1O60883 481 aa9.32□□□□□ -0.92
COPS3-216ENST00000579716 SCTRP47872 440 aa9.32□□□□□ -0.92
COPS3-216ENST00000579716 PLA2G4EQ3MJ16 856 aa9.32□□□□□ -0.92
COPS3-216ENST00000579716 DCAF5Q96JK2 942 aa9.32□□□□□ -0.92
COPS3-216ENST00000579716 E9PSI1 815 aa9.31□□□□□ -0.92
COPS3-216ENST00000579716 ERVK-9P63128 1117 aa9.31□□□□□ -0.92
COPS3-216ENST00000579716 USP35Q9P2H5 1018 aa9.31□□□□□ -0.92
COPS3-216ENST00000579716 GPC1P35052 558 aa9.3□□□□□ -0.92
COPS3-216ENST00000579716 GTPBP3Q969Y2 492 aaKnown RBP9.3□□□□□ -0.92
COPS3-216ENST00000579716 GMCL1Q96IK5 515 aa9.3□□□□□ -0.92
COPS3-216ENST00000579716 DYRK1BQ9Y463 629 aa9.3□□□□□ -0.92
COPS3-216ENST00000579716 MEN1O00255 615 aa9.29□□□□□ -0.92
COPS3-216ENST00000579716 FOXK2Q01167 660 aa9.29□□□□□ -0.92
COPS3-216ENST00000579716 CC2D2BQ6DHV5 1058 aa9.29□□□□□ -0.92
COPS3-216ENST00000579716 ARID4BQ4LE39 1312 aaPredicted RBP9.29□□□□□ -0.92
COPS3-216ENST00000579716 ZBBXA8MT70 800 aa9.28□□□□□ -0.92
COPS3-216ENST00000579716 APBB1O00213 710 aa9.28□□□□□ -0.92
COPS3-216ENST00000579716 TRAK2O60296 914 aa9.28□□□□□ -0.92
COPS3-216ENST00000579716 PROCP04070 461 aa9.28□□□□□ -0.92
COPS3-216ENST00000579716 BCRP11274 1271 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms