RNA–Protein interactions for RNA: ENST00000578922.1

SMG8-203, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

BASIC

Gene SMG8, Length 2,178 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-203ENST00000578922 ELL2O00472 640 aaPredicted RBP26.03■■□□□ 1.76
SMG8-203ENST00000578922 CRYBG1Q9Y4K1 1723 aa26.03■■□□□ 1.76
SMG8-203ENST00000578922 CT47B1P0C2W7 299 aaPredicted RBP26.02■■□□□ 1.76
SMG8-203ENST00000578922 TSPYL6Q8N831 410 aa26.01■■□□□ 1.75
SMG8-203ENST00000578922 SMC4Q9NTJ3 1288 aa26.01■■□□□ 1.75
SMG8-203ENST00000578922 GNAT3A8MTJ3 354 aa26■■□□□ 1.75
SMG8-203ENST00000578922 SSH1Q8WYL5 1049 aa26■■□□□ 1.75
SMG8-203ENST00000578922 NLRP2Q9NX02 1062 aa26■■□□□ 1.75
SMG8-203ENST00000578922 NHSL1Q5SYE7 1610 aa26■■□□□ 1.75
SMG8-203ENST00000578922 CSB-PGBD3P0DP91 1061 aa26■■□□□ 1.75
SMG8-203ENST00000578922 MIS18AQ9NYP9 233 aa26■■□□□ 1.75
SMG8-203ENST00000578922 TNNQ9UQP3 1299 aa25.99■■□□□ 1.75
SMG8-203ENST00000578922 PANK1Q8TE04 598 aa25.98■■□□□ 1.75
SMG8-203ENST00000578922 CRB1P82279 1406 aa25.98■■□□□ 1.75
SMG8-203ENST00000578922 MAP3K5Q99683 1374 aa25.98■■□□□ 1.75
SMG8-203ENST00000578922 PRDM11Q9NQV5 511 aa25.97■■□□□ 1.75
SMG8-203ENST00000578922 COL18A1P39060 1754 aa25.97■■□□□ 1.75
SMG8-203ENST00000578922 C8orf58Q8NAV2 365 aa25.97■■□□□ 1.75
SMG8-203ENST00000578922 ROBO1Q9Y6N7 1651 aa25.97■■□□□ 1.75
SMG8-203ENST00000578922 NOP58Q9Y2X3 529 aaKnown RBP25.96■■□□□ 1.75
SMG8-203ENST00000578922 CPDO75976 1380 aa25.96■■□□□ 1.75
SMG8-203ENST00000578922 CHL1O00533 1208 aa25.96■■□□□ 1.75
SMG8-203ENST00000578922 ANP32AP39687 249 aaKnown RBP25.95■■□□□ 1.74
SMG8-203ENST00000578922 KRT24Q2M2I5 525 aa25.95■■□□□ 1.74
SMG8-203ENST00000578922 CLUAP1Q96AJ1 413 aa25.95■■□□□ 1.74
SMG8-203ENST00000578922 TCERG1O14776 1098 aaKnown RBP25.95■■□□□ 1.74
SMG8-203ENST00000578922 VAMP4O75379 141 aa25.95■■□□□ 1.74
SMG8-203ENST00000578922 TWISTNBQ3B726 338 aaPredicted RBP25.95■■□□□ 1.74
SMG8-203ENST00000578922 IL17REQ8NFR9 667 aa25.95■■□□□ 1.74
SMG8-203ENST00000578922 HTATSF1O43719 755 aaKnown RBP25.93■■□□□ 1.74
SMG8-203ENST00000578922 PLEKHO1Q53GL0 409 aaPredicted RBP25.93■■□□□ 1.74
SMG8-203ENST00000578922 ZNF530Q6P9A1 599 aaPredicted RBP25.93■■□□□ 1.74
SMG8-203ENST00000578922 NCAPD2Q15021 1401 aa25.93■■□□□ 1.74
SMG8-203ENST00000578922 COG6Q9Y2V7 657 aa25.93■■□□□ 1.74
SMG8-203ENST00000578922 PDE3AQ14432 1141 aa25.92■■□□□ 1.74
SMG8-203ENST00000578922 TSPYL4Q9UJ04 414 aa25.92■■□□□ 1.74
SMG8-203ENST00000578922 RLBP1P12271 317 aa25.92■■□□□ 1.74
SMG8-203ENST00000578922 CAMTA1Q9Y6Y1 1673 aa25.91■■□□□ 1.74
SMG8-203ENST00000578922 NOB1Q9ULX3 412 aaKnown RBP25.9■■□□□ 1.74
SMG8-203ENST00000578922 ZKSCAN2Q63HK3 967 aa25.9■■□□□ 1.74
SMG8-203ENST00000578922 AMOTQ4VCS5 1084 aa25.89■■□□□ 1.74
SMG8-203ENST00000578922 IPO9Q96P70 1041 aaKnown RBP25.89■■□□□ 1.74
SMG8-203ENST00000578922 ABCA3Q99758 1704 aa25.89■■□□□ 1.73
SMG8-203ENST00000578922 PIP4K2BP78356 416 aa25.89■■□□□ 1.73
SMG8-203ENST00000578922 ALDH1L2Q3SY69 923 aa25.89■■□□□ 1.73
SMG8-203ENST00000578922 RAPGEF4Q8WZA2 1011 aa25.89■■□□□ 1.73
SMG8-203ENST00000578922 LGR6Q9HBX8 967 aa25.89■■□□□ 1.73
SMG8-203ENST00000578922 MS4A1P11836 297 aa25.88■■□□□ 1.73
SMG8-203ENST00000578922 MPRIPQ6WCQ1 1025 aa25.88■■□□□ 1.73
SMG8-203ENST00000578922 LMO7Q8WWI1 1683 aa25.87■■□□□ 1.73
SMG8-203ENST00000578922 AKAP4Q5JQC9 854 aa25.86■■□□□ 1.73
SMG8-203ENST00000578922 C1orf141Q5JVX7 400 aa25.86■■□□□ 1.73
SMG8-203ENST00000578922 ABCC6O95255 1503 aa25.86■■□□□ 1.73
SMG8-203ENST00000578922 FTSJ3Q8IY81 847 aaKnown RBP25.86■■□□□ 1.73
SMG8-203ENST00000578922 TRIM27P14373 513 aa25.85■■□□□ 1.73
SMG8-203ENST00000578922 ZNF428Q96B54 188 aa25.85■■□□□ 1.73
SMG8-203ENST00000578922 LRRC37A3O60309 1634 aa25.85■■□□□ 1.73
SMG8-203ENST00000578922 TATP17735 454 aaPredicted RBP25.84■■□□□ 1.73
SMG8-203ENST00000578922 DZIP1LQ8IYY4 767 aaKnown RBP25.84■■□□□ 1.73
SMG8-203ENST00000578922 STRN4Q9NRL3 753 aa25.84■■□□□ 1.73
SMG8-203ENST00000578922 FAM208AQ9UK61 1670 aaKnown RBP25.84■■□□□ 1.73
SMG8-203ENST00000578922 KIF16BQ96L93 1317 aa25.84■■□□□ 1.73
SMG8-203ENST00000578922 TAF7Q15545 349 aaPredicted RBP25.83■■□□□ 1.73
SMG8-203ENST00000578922 ATF7IPQ6VMQ6 1270 aa25.83■■□□□ 1.73
SMG8-203ENST00000578922 TOM1L2Q6ZVM7 507 aa25.83■■□□□ 1.73
SMG8-203ENST00000578922 MRPL50Q8N5N7 158 aaKnown RBP25.83■■□□□ 1.73
SMG8-203ENST00000578922 MEGF6O75095 1541 aa25.83■■□□□ 1.73
SMG8-203ENST00000578922 AHDC1Q5TGY3 1603 aaPredicted RBP25.83■■□□□ 1.72
SMG8-203ENST00000578922 AEBP2Q6ZN18 517 aaPredicted RBP25.82■■□□□ 1.72
SMG8-203ENST00000578922 WDR17Q8IZU2 1322 aa25.81■■□□□ 1.72
SMG8-203ENST00000578922 CEMIPQ8WUJ3 1361 aa25.81■■□□□ 1.72
SMG8-203ENST00000578922 TOM1O60784 492 aa25.8■■□□□ 1.72
SMG8-203ENST00000578922 COL5A2P05997 1499 aaPredicted RBP25.8■■□□□ 1.72
SMG8-203ENST00000578922 IPO8O15397 1037 aaKnown RBP25.8■■□□□ 1.72
SMG8-203ENST00000578922 EVA1CP58658 441 aa25.79■■□□□ 1.72
SMG8-203ENST00000578922 RNMTO43148 476 aaKnown RBP25.79■■□□□ 1.72
SMG8-203ENST00000578922 TEFQ10587 303 aa25.79■■□□□ 1.72
SMG8-203ENST00000578922 LARP1Q6PKG0 1096 aaKnown RBP25.78■■□□□ 1.72
SMG8-203ENST00000578922 ZBTB47Q9UFB7 747 aaPredicted RBP25.78■■□□□ 1.72
SMG8-203ENST00000578922 MVPQ14764 893 aaKnown RBP25.77■■□□□ 1.72
SMG8-203ENST00000578922 SPG7Q9UQ90 795 aa25.77■■□□□ 1.72
SMG8-203ENST00000578922 UBAP1LF5GYI3 381 aa25.76■■□□□ 1.71
SMG8-203ENST00000578922 BRPF1P55201 1214 aaPredicted RBP25.76■■□□□ 1.71
SMG8-203ENST00000578922 ITPRIPQ8IWB1 547 aa25.76■■□□□ 1.71
SMG8-203ENST00000578922 PHLPP1O60346 1717 aa25.75■■□□□ 1.71
SMG8-203ENST00000578922 TMEM57Q8N5G2 664 aa25.75■■□□□ 1.71
SMG8-203ENST00000578922 BTG4Q9NY30 223 aa25.75■■□□□ 1.71
SMG8-203ENST00000578922 USP35Q9P2H5 1018 aa25.75■■□□□ 1.71
SMG8-203ENST00000578922 NECTIN2Q92692 538 aa25.73■■□□□ 1.71
SMG8-203ENST00000578922 BTBD11A6QL63 1104 aa25.73■■□□□ 1.71
SMG8-203ENST00000578922 KCNQ3O43525 872 aa25.73■■□□□ 1.71
SMG8-203ENST00000578922 PHKG2P15735 406 aa25.73■■□□□ 1.71
SMG8-203ENST00000578922 PDE4AP27815 886 aa25.73■■□□□ 1.71
SMG8-203ENST00000578922 BACH2Q9BYV9 841 aa25.73■■□□□ 1.71
SMG8-203ENST00000578922 BABAM1Q9NWV8 329 aa25.72■■□□□ 1.71
SMG8-203ENST00000578922 VIRMAQ69YN4 1812 aaKnown RBP25.71■■□□□ 1.71
SMG8-203ENST00000578922 CYP27B1O15528 508 aa25.71■■□□□ 1.71
SMG8-203ENST00000578922 ADAMTS2O95450 1211 aa25.71■■□□□ 1.71
SMG8-203ENST00000578922 IFNL2Q8IZJ0 200 aa25.71■■□□□ 1.71
SMG8-203ENST00000578922 CARD10Q9BWT7 1032 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms