RNA–Protein interactions for RNA: ENST00000578658.1

TRAPPC8-205, Transcript of trafficking protein particle complex 8, humanhuman

TSL 5

Gene TRAPPC8, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-205ENST00000578658 PLPP7Q8NBV4 271 aa8.58□□□□□ -1.04
TRAPPC8-205ENST00000578658 NFATC2IPQ8NCF5 419 aa8.58□□□□□ -1.04
TRAPPC8-205ENST00000578658 ZNF395Q9H8N7 513 aaPredicted RBP8.58□□□□□ -1.04
TRAPPC8-205ENST00000578658 MYCP01106 439 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC8-205ENST00000578658 INSM2Q96T92 566 aaPredicted RBP8.57□□□□□ -1.04
TRAPPC8-205ENST00000578658 TTLL8A6PVC2 850 aa8.56□□□□□ -1.04
TRAPPC8-205ENST00000578658 SOBPA7XYQ1 873 aa8.56□□□□□ -1.04
TRAPPC8-205ENST00000578658 CTSOP43234 321 aaPredicted RBP8.56□□□□□ -1.04
TRAPPC8-205ENST00000578658 USP4Q13107 963 aa8.56□□□□□ -1.04
TRAPPC8-205ENST00000578658 OXLD1Q5BKU9 147 aa8.56□□□□□ -1.04
TRAPPC8-205ENST00000578658 GLMNQ92990 594 aa8.56□□□□□ -1.04
TRAPPC8-205ENST00000578658 UCN2Q96RP3 112 aa8.56□□□□□ -1.04
TRAPPC8-205ENST00000578658 ESF1Q9H501 851 aaKnown RBP8.56□□□□□ -1.04
TRAPPC8-205ENST00000578658 DNMT3LQ9UJW3 386 aa8.56□□□□□ -1.04
TRAPPC8-205ENST00000578658 MAN1A2O60476 641 aa8.55□□□□□ -1.04
TRAPPC8-205ENST00000578658 SKIP12755 728 aa8.55□□□□□ -1.04
TRAPPC8-205ENST00000578658 ZNF775Q96BV0 537 aaPredicted RBP8.55□□□□□ -1.04
TRAPPC8-205ENST00000578658 A0A1W2PRU2 124 aa8.54□□□□□ -1.04
TRAPPC8-205ENST00000578658 SIRT1Q96EB6 747 aa8.54□□□□□ -1.04
TRAPPC8-205ENST00000578658 POLMQ9NP87 494 aaPredicted RBP8.54□□□□□ -1.04
TRAPPC8-205ENST00000578658 GNRH1P01148 92 aa8.53□□□□□ -1.04
TRAPPC8-205ENST00000578658 FOXD4L5Q5VV16 416 aaPredicted RBP8.53□□□□□ -1.04
TRAPPC8-205ENST00000578658 RNF217Q8TC41 542 aa8.53□□□□□ -1.04
TRAPPC8-205ENST00000578658 ARHGEF10LQ9HCE6 1279 aa8.53□□□□□ -1.04
TRAPPC8-205ENST00000578658 CLN3Q13286 438 aa8.52□□□□□ -1.05
TRAPPC8-205ENST00000578658 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.52□□□□□ -1.05
TRAPPC8-205ENST00000578658 ZMYND15Q9H091 742 aa8.52□□□□□ -1.05
TRAPPC8-205ENST00000578658 FIGNL2A6NMB9 653 aa8.51□□□□□ -1.05
TRAPPC8-205ENST00000578658 USP17L5A8MUK1 530 aa8.51□□□□□ -1.05
TRAPPC8-205ENST00000578658 MEN1O00255 615 aa8.51□□□□□ -1.05
TRAPPC8-205ENST00000578658 LZTS3O60299 673 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC8-205ENST00000578658 RNF144AP50876 292 aaPredicted RBP8.51□□□□□ -1.05
TRAPPC8-205ENST00000578658 TBC1D9Q6ZT07 1266 aa8.51□□□□□ -1.05
TRAPPC8-205ENST00000578658 CALR3Q96L12 384 aaKnown RBP8.51□□□□□ -1.05
TRAPPC8-205ENST00000578658 ATP9BO43861 1147 aa8.5□□□□□ -1.05
TRAPPC8-205ENST00000578658 GPC1P35052 558 aa8.5□□□□□ -1.05
TRAPPC8-205ENST00000578658 NCOA4Q13772 614 aa8.5□□□□□ -1.05
TRAPPC8-205ENST00000578658 EML3Q32P44 896 aa8.5□□□□□ -1.05
TRAPPC8-205ENST00000578658 PLEKHM2Q8IWE5 1019 aa8.5□□□□□ -1.05
TRAPPC8-205ENST00000578658 RAB6BQ9NRW1 208 aa8.5□□□□□ -1.05
TRAPPC8-205ENST00000578658 ZNF777Q9ULD5 760 aaPredicted RBP8.5□□□□□ -1.05
TRAPPC8-205ENST00000578658 IL2RAP01589 272 aa8.49□□□□□ -1.05
TRAPPC8-205ENST00000578658 DEPDC4Q8N2C3 294 aa8.49□□□□□ -1.05
TRAPPC8-205ENST00000578658 NLRP3Q96P20 1036 aa8.49□□□□□ -1.05
TRAPPC8-205ENST00000578658 NXF1Q9UBU9 619 aaKnown RBP8.49□□□□□ -1.05
TRAPPC8-205ENST00000578658 USP17L3A6NCW0 530 aa8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 USP17L4A6NCW7 530 aa8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 TERTO14746 1132 aaKnown RBP8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 USP17L2Q6R6M4 530 aa8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 USP17L1Q7RTZ2 530 aa8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 CNKSR1Q969H4 720 aa8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 XAGE2Q96GT9 111 aa8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 ESYT1Q9BSJ8 1104 aa8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 ETNK1Q9HBU6 452 aa8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 NOD1Q9Y239 953 aa8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 PCDHGA11Q9Y5H2 935 aa8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 HRH3Q9Y5N1 445 aa8.48□□□□□ -1.05
TRAPPC8-205ENST00000578658 STAU1O95793 577 aaKnown RBP8.47□□□□□ -1.05
TRAPPC8-205ENST00000578658 SCNN1DP51172 638 aa8.47□□□□□ -1.05
TRAPPC8-205ENST00000578658 PTSQ03393 145 aa8.47□□□□□ -1.05
TRAPPC8-205ENST00000578658 NFX1Q12986 1120 aaKnown RBP8.47□□□□□ -1.05
TRAPPC8-205ENST00000578658 ESCO1Q5FWF5 840 aa8.47□□□□□ -1.05
TRAPPC8-205ENST00000578658 LYSMD3Q7Z3D4 306 aa8.47□□□□□ -1.05
TRAPPC8-205ENST00000578658 NPAS3Q8IXF0 933 aa8.47□□□□□ -1.05
TRAPPC8-205ENST00000578658 LCE2AQ5TA79 106 aaPredicted RBP8.46□□□□□ -1.06
TRAPPC8-205ENST00000578658 PPP1R12CQ9BZL4 782 aa8.46□□□□□ -1.06
TRAPPC8-205ENST00000578658 GRIP2Q9C0E4 1043 aa8.46□□□□□ -1.06
TRAPPC8-205ENST00000578658 TFIP11Q9UBB9 837 aaKnown RBP8.46□□□□□ -1.06
TRAPPC8-205ENST00000578658 PALM3A6NDB9 673 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC8-205ENST00000578658 H3BM21 787 aa8.45□□□□□ -1.06
TRAPPC8-205ENST00000578658 WASLO00401 505 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC8-205ENST00000578658 GTF2IP78347 998 aa8.45□□□□□ -1.06
TRAPPC8-205ENST00000578658 SLC27A3Q5K4L6 730 aa8.45□□□□□ -1.06
TRAPPC8-205ENST00000578658 TREML4Q6UXN2 200 aa8.45□□□□□ -1.06
TRAPPC8-205ENST00000578658 PRICKLE2Q7Z3G6 844 aa8.45□□□□□ -1.06
TRAPPC8-205ENST00000578658 MAFBQ9Y5Q3 323 aaPredicted RBP8.45□□□□□ -1.06
TRAPPC8-205ENST00000578658 SLC35F4A4IF30 521 aa8.44□□□□□ -1.06
TRAPPC8-205ENST00000578658 INHAP05111 366 aa8.44□□□□□ -1.06
TRAPPC8-205ENST00000578658 VEGFBP49765 207 aa8.44□□□□□ -1.06
TRAPPC8-205ENST00000578658 GDF10P55107 478 aa8.44□□□□□ -1.06
TRAPPC8-205ENST00000578658 CENPCQ03188 943 aa8.44□□□□□ -1.06
TRAPPC8-205ENST00000578658 FHDC1Q9C0D6 1143 aaPredicted RBP8.44□□□□□ -1.06
TRAPPC8-205ENST00000578658 SENP3-EIF4A1A0A087X0R7 540 aa8.43□□□□□ -1.06
TRAPPC8-205ENST00000578658 TMEM229AB2RXF0 380 aa8.43□□□□□ -1.06
TRAPPC8-205ENST00000578658 PPFIA3O75145 1194 aa8.43□□□□□ -1.06
TRAPPC8-205ENST00000578658 WFS1O76024 890 aa8.43□□□□□ -1.06
TRAPPC8-205ENST00000578658 TRIM50Q86XT4 487 aa8.43□□□□□ -1.06
TRAPPC8-205ENST00000578658 CCDC155Q8N6L0 562 aa8.43□□□□□ -1.06
TRAPPC8-205ENST00000578658 SPATA31C2B4DYI2 1134 aa8.42□□□□□ -1.06
TRAPPC8-205ENST00000578658 LCE2CQ5TA81 110 aa8.42□□□□□ -1.06
TRAPPC8-205ENST00000578658 MKRN1Q9UHC7 482 aaKnown RBP8.42□□□□□ -1.06
TRAPPC8-205ENST00000578658 RHOQP17081 205 aa8.41□□□□□ -1.06
TRAPPC8-205ENST00000578658 CLDN10P78369 228 aa8.41□□□□□ -1.06
TRAPPC8-205ENST00000578658 POU4F2Q12837 409 aa8.41□□□□□ -1.06
TRAPPC8-205ENST00000578658 NBPF10Q6P3W6 841 aaKnown RBP8.41□□□□□ -1.06
TRAPPC8-205ENST00000578658 C14orf37Q86TY3 774 aa8.41□□□□□ -1.06
TRAPPC8-205ENST00000578658 NBPF15Q8N660 670 aa8.41□□□□□ -1.06
TRAPPC8-205ENST00000578658 SLC16A10Q8TF71 515 aa8.41□□□□□ -1.06
TRAPPC8-205ENST00000578658 KIAA1024Q9UPX6 916 aa8.41□□□□□ -1.06
TRAPPC8-205ENST00000578658 ZBTB7BO15156 539 aaPredicted RBP8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms