RNA–Protein interactions for RNA: ENST00000578454.5

NCOA4-201, Transcript of nuclear receptor coactivator 4, humanhuman

TSL 1 (best) BASIC

Gene NCOA4, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCOA4-201ENST00000578454 MYH16Q9H6N6 1097 aa11.02□□□□□ -0.64
NCOA4-201ENST00000578454 PRDM11Q9NQV5 511 aa11.02□□□□□ -0.64
NCOA4-201ENST00000578454 IL16Q14005 1332 aa11.02□□□□□ -0.65
NCOA4-201ENST00000578454 MYCNP04198 464 aaPredicted RBP11.02□□□□□ -0.65
NCOA4-201ENST00000578454 CHRNA2Q15822 529 aa11.02□□□□□ -0.65
NCOA4-201ENST00000578454 CERKQ8TCT0 537 aa11.02□□□□□ -0.65
NCOA4-201ENST00000578454 SPINK5Q9NQ38 1064 aaPredicted RBP11.02□□□□□ -0.65
NCOA4-201ENST00000578454 ERBB3P21860 1342 aa11.01□□□□□ -0.65
NCOA4-201ENST00000578454 USHBP1Q8N6Y0 703 aa11.01□□□□□ -0.65
NCOA4-201ENST00000578454 GAS2L2Q8NHY3 880 aa11.01□□□□□ -0.65
NCOA4-201ENST00000578454 COL18A1P39060 1754 aa11.01□□□□□ -0.65
NCOA4-201ENST00000578454 PHLPP1O60346 1717 aa11.01□□□□□ -0.65
NCOA4-201ENST00000578454 CSB-PGBD3P0DP91 1061 aa11.01□□□□□ -0.65
NCOA4-201ENST00000578454 BRPF1P55201 1214 aaPredicted RBP11.01□□□□□ -0.65
NCOA4-201ENST00000578454 RCAN3Q9UKA8 241 aa11.01□□□□□ -0.65
NCOA4-201ENST00000578454 RGPD5Q99666 1765 aa11□□□□□ -0.65
NCOA4-201ENST00000578454 ABCA3Q99758 1704 aa11□□□□□ -0.65
NCOA4-201ENST00000578454 MTHFSDQ2M296 383 aaKnown RBP11□□□□□ -0.65
NCOA4-201ENST00000578454 NLRP2Q9NX02 1062 aa11□□□□□ -0.65
NCOA4-201ENST00000578454 COL22A1Q8NFW1 1626 aaPredicted RBP10.98□□□□□ -0.65
NCOA4-201ENST00000578454 RTF1Q92541 710 aaKnown RBP10.98□□□□□ -0.65
NCOA4-201ENST00000578454 RGPD2P0DJD1 1756 aa10.98□□□□□ -0.65
NCOA4-201ENST00000578454 NCAPD2Q15021 1401 aa10.98□□□□□ -0.65
NCOA4-201ENST00000578454 COL16A1Q07092 1604 aaPredicted RBP10.98□□□□□ -0.65
NCOA4-201ENST00000578454 DLG5Q8TDM6 1919 aa10.98□□□□□ -0.65
NCOA4-201ENST00000578454 HTATSF1O43719 755 aaKnown RBP10.98□□□□□ -0.65
NCOA4-201ENST00000578454 PLEKHO1Q53GL0 409 aaPredicted RBP10.98□□□□□ -0.65
NCOA4-201ENST00000578454 FAM208AQ9UK61 1670 aaKnown RBP10.97□□□□□ -0.65
NCOA4-201ENST00000578454 GNAI1P63096 354 aa10.97□□□□□ -0.65
NCOA4-201ENST00000578454 AMOTQ4VCS5 1084 aa10.97□□□□□ -0.65
NCOA4-201ENST00000578454 CAMTA1Q9Y6Y1 1673 aa10.97□□□□□ -0.65
NCOA4-201ENST00000578454 FAM83GA6ND36 823 aa10.97□□□□□ -0.65
NCOA4-201ENST00000578454 GNAT3A8MTJ3 354 aa10.96□□□□□ -0.65
NCOA4-201ENST00000578454 RGL2O15211 777 aa10.96□□□□□ -0.65
NCOA4-201ENST00000578454 EVA1CP58658 441 aa10.96□□□□□ -0.65
NCOA4-201ENST00000578454 RAPGEF4Q8WZA2 1011 aa10.96□□□□□ -0.65
NCOA4-201ENST00000578454 IFT57Q9NWB7 429 aa10.96□□□□□ -0.65
NCOA4-201ENST00000578454 LAS1LQ9Y4W2 734 aaKnown RBP10.96□□□□□ -0.65
NCOA4-201ENST00000578454 RNF123Q5XPI4 1314 aa10.96□□□□□ -0.65
NCOA4-201ENST00000578454 WDR17Q8IZU2 1322 aa10.96□□□□□ -0.65
NCOA4-201ENST00000578454 LMO7Q8WWI1 1683 aa10.96□□□□□ -0.66
NCOA4-201ENST00000578454 THUMPD2Q9BTF0 503 aaKnown RBP10.96□□□□□ -0.66
NCOA4-201ENST00000578454 FANCIQ9NVI1 1328 aa10.95□□□□□ -0.66
NCOA4-201ENST00000578454 TATP17735 454 aaPredicted RBP10.95□□□□□ -0.66
NCOA4-201ENST00000578454 DCTN1Q14203 1278 aa10.95□□□□□ -0.66
NCOA4-201ENST00000578454 TOM1L2Q6ZVM7 507 aa10.95□□□□□ -0.66
NCOA4-201ENST00000578454 MCM10Q7L590 875 aa10.95□□□□□ -0.66
NCOA4-201ENST00000578454 MAP3K5Q99683 1374 aa10.95□□□□□ -0.66
NCOA4-201ENST00000578454 CT47B1P0C2W7 299 aaPredicted RBP10.95□□□□□ -0.66
NCOA4-201ENST00000578454 TSR2Q969E8 191 aaKnown RBP10.95□□□□□ -0.66
NCOA4-201ENST00000578454 COL5A2P05997 1499 aaPredicted RBP10.95□□□□□ -0.66
NCOA4-201ENST00000578454 ZNF853P0CG23 659 aa10.94□□□□□ -0.66
NCOA4-201ENST00000578454 PLEKHG2Q9H7P9 1386 aa10.94□□□□□ -0.66
NCOA4-201ENST00000578454 COL14A1Q05707 1796 aaKnown RBP10.94□□□□□ -0.66
NCOA4-201ENST00000578454 ECM2O94769 699 aaPredicted RBP10.93□□□□□ -0.66
NCOA4-201ENST00000578454 RRP1P56182 461 aaKnown RBP10.93□□□□□ -0.66
NCOA4-201ENST00000578454 AKAP4Q5JQC9 854 aa10.93□□□□□ -0.66
NCOA4-201ENST00000578454 C1orf141Q5JVX7 400 aa10.93□□□□□ -0.66
NCOA4-201ENST00000578454 ZNF530Q6P9A1 599 aaPredicted RBP10.93□□□□□ -0.66
NCOA4-201ENST00000578454 ARID3AQ99856 593 aa10.93□□□□□ -0.66
NCOA4-201ENST00000578454 STRN4Q9NRL3 753 aa10.93□□□□□ -0.66
NCOA4-201ENST00000578454 EXOSC9Q06265 439 aaKnown RBP10.93□□□□□ -0.66
NCOA4-201ENST00000578454 GOLGA6L2Q8N9W4 650 aaPredicted RBP10.93□□□□□ -0.66
NCOA4-201ENST00000578454 BTG4Q9NY30 223 aa10.93□□□□□ -0.66
NCOA4-201ENST00000578454 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.93□□□□□ -0.665e-17■□□□□ 11.2
NCOA4-201ENST00000578454 SPG7Q9UQ90 795 aa10.93□□□□□ -0.66
NCOA4-201ENST00000578454 CARD10Q9BWT7 1032 aa10.92□□□□□ -0.66
NCOA4-201ENST00000578454 NUTM2BA6NNL0 878 aaPredicted RBP10.92□□□□□ -0.66
NCOA4-201ENST00000578454 NUTM2EB1AL46 878 aaPredicted RBP10.92□□□□□ -0.66
NCOA4-201ENST00000578454 IRX6P78412 446 aaPredicted RBP10.92□□□□□ -0.66
NCOA4-201ENST00000578454 ERICH6BQ5W0A0 696 aa10.92□□□□□ -0.66
NCOA4-201ENST00000578454 NUTM2AQ8IVF1 878 aaPredicted RBP10.92□□□□□ -0.66
NCOA4-201ENST00000578454 MBIPQ9NS73 344 aa10.92□□□□□ -0.66
NCOA4-201ENST00000578454 JCADQ9P266 1359 aa10.92□□□□□ -0.66
NCOA4-201ENST00000578454 CHL1O00533 1208 aa10.91□□□□□ -0.66
NCOA4-201ENST00000578454 ADAMTS2O95450 1211 aa10.91□□□□□ -0.66
NCOA4-201ENST00000578454 LARP1Q6PKG0 1096 aaKnown RBP10.91□□□□□ -0.66
NCOA4-201ENST00000578454 CRB1P82279 1406 aa10.91□□□□□ -0.66
NCOA4-201ENST00000578454 IL17REQ8NFR9 667 aa10.91□□□□□ -0.66
NCOA4-201ENST00000578454 RARSP54136 660 aaKnown RBP10.9□□□□□ -0.67
NCOA4-201ENST00000578454 ZNF428Q96B54 188 aa10.9□□□□□ -0.67
NCOA4-201ENST00000578454 BABAM1Q9NWV8 329 aa10.9□□□□□ -0.67
NCOA4-201ENST00000578454 MEGF6O75095 1541 aa10.89□□□□□ -0.67
NCOA4-201ENST00000578454 IL2RBP14784 551 aa10.89□□□□□ -0.67
NCOA4-201ENST00000578454 MAPK8IP2Q13387 824 aaPredicted RBP10.89□□□□□ -0.67
NCOA4-201ENST00000578454 TAF7Q15545 349 aaPredicted RBP10.89□□□□□ -0.67
NCOA4-201ENST00000578454 BCAR3O75815 825 aa10.89□□□□□ -0.67
NCOA4-201ENST00000578454 IFNL2Q8IZJ0 200 aa10.89□□□□□ -0.67
NCOA4-201ENST00000578454 TSPYL4Q9UJ04 414 aa10.89□□□□□ -0.67
NCOA4-201ENST00000578454 CEMIPQ8WUJ3 1361 aa10.88□□□□□ -0.67
NCOA4-201ENST00000578454 TEFQ10587 303 aa10.88□□□□□ -0.67
NCOA4-201ENST00000578454 MPRIPQ6WCQ1 1025 aa10.88□□□□□ -0.67
NCOA4-201ENST00000578454 LGR6Q9HBX8 967 aa10.88□□□□□ -0.67
NCOA4-201ENST00000578454 OVOS2A0A0G2JMS6 1433 aa10.88□□□□□ -0.67
NCOA4-201ENST00000578454 LRRC37A3O60309 1634 aa10.88□□□□□ -0.67
NCOA4-201ENST00000578454 SPATA31A6Q5VVP1 1343 aa10.88□□□□□ -0.67
NCOA4-201ENST00000578454 PARP4Q9UKK3 1724 aaKnown RBP10.88□□□□□ -0.67
NCOA4-201ENST00000578454 RNMTO43148 476 aaKnown RBP10.87□□□□□ -0.67
NCOA4-201ENST00000578454 PLIN1O60240 522 aa10.87□□□□□ -0.67
NCOA4-201ENST00000578454 HSP90AB1P08238 724 aaKnown RBP10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms