RNA–Protein interactions for RNA: ENST00000578009.5

IFT20-205, Transcript of intraflagellar transport 20, humanhuman

TSL 3

Gene IFT20, Length 611 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-205ENST00000578009 LILRA1O75019 489 aa8.33□□□□□ -1.08
IFT20-205ENST00000578009 IGHA1P01876 353 aa8.33□□□□□ -1.08
IFT20-205ENST00000578009 SRSF11Q05519 484 aaKnown RBP8.33□□□□□ -1.08
IFT20-205ENST00000578009 PRICKLE2Q7Z3G6 844 aa8.33□□□□□ -1.08
IFT20-205ENST00000578009 PNMA1Q8ND90 353 aa8.33□□□□□ -1.08
IFT20-205ENST00000578009 SCRIBQ14160 1630 aa8.32□□□□□ -1.08
IFT20-205ENST00000578009 GAS6Q14393 721 aa8.32□□□□□ -1.08
IFT20-205ENST00000578009 KDF1Q8NAX2 398 aaPredicted RBP8.32□□□□□ -1.08
IFT20-205ENST00000578009 CELA2BP08218 269 aaPredicted RBP8.31□□□□□ -1.08
IFT20-205ENST00000578009 RHOQP17081 205 aa8.31□□□□□ -1.08
IFT20-205ENST00000578009 SH3D19Q5HYK7 790 aa8.31□□□□□ -1.08
IFT20-205ENST00000578009 CYLDQ9NQC7 956 aa8.31□□□□□ -1.08
IFT20-205ENST00000578009 ENAMQ9NRM1 1142 aa8.31□□□□□ -1.08
IFT20-205ENST00000578009 FOXK2Q01167 660 aa8.3□□□□□ -1.08
IFT20-205ENST00000578009 PPP2R2DQ66LE6 453 aa8.3□□□□□ -1.08
IFT20-205ENST00000578009 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.3□□□□□ -1.08
IFT20-205ENST00000578009 HMX1Q9NP08 348 aaPredicted RBP8.3□□□□□ -1.08
IFT20-205ENST00000578009 ESPNB1AK53 854 aa8.28□□□□□ -1.08
IFT20-205ENST00000578009 GPR25O00155 361 aa8.28□□□□□ -1.08
IFT20-205ENST00000578009 RIPOR1Q6ZS17 1223 aa8.28□□□□□ -1.08
IFT20-205ENST00000578009 MEN1O00255 615 aa8.27□□□□□ -1.09
IFT20-205ENST00000578009 USP17L8P0C7I0 530 aa8.27□□□□□ -1.09
IFT20-205ENST00000578009 RNF144AP50876 292 aaPredicted RBP8.27□□□□□ -1.09
IFT20-205ENST00000578009 FOXR1Q6PIV2 292 aa8.27□□□□□ -1.09
IFT20-205ENST00000578009 KRTAP1-3Q8IUG1 177 aa8.27□□□□□ -1.09
IFT20-205ENST00000578009 ZNF837Q96EG3 531 aaPredicted RBP8.27□□□□□ -1.09
IFT20-205ENST00000578009 FAM117AQ9C073 453 aa8.27□□□□□ -1.09
IFT20-205ENST00000578009 MBIPQ9NS73 344 aa8.27□□□□□ -1.09
IFT20-205ENST00000578009 ATP5J2-PTCD1G3V325 749 aa8.26□□□□□ -1.09
IFT20-205ENST00000578009 TRIM22Q8IYM9 498 aa8.26□□□□□ -1.09
IFT20-205ENST00000578009 DDRGK1Q96HY6 314 aa8.26□□□□□ -1.09
IFT20-205ENST00000578009 KDM4CQ9H3R0 1056 aa8.26□□□□□ -1.09
IFT20-205ENST00000578009 GPBP1L1Q9HC44 474 aaPredicted RBP8.26□□□□□ -1.09
IFT20-205ENST00000578009 CNTNAP5Q8WYK1 1306 aa8.26□□□□□ -1.09
IFT20-205ENST00000578009 DBN1Q16643 649 aa8.25□□□□□ -1.09
IFT20-205ENST00000578009 SEPT12Q8IYM1 358 aa8.25□□□□□ -1.09
IFT20-205ENST00000578009 NEDD1Q8NHV4 660 aa8.25□□□□□ -1.09
IFT20-205ENST00000578009 TRIM52Q96A61 297 aa8.25□□□□□ -1.09
IFT20-205ENST00000578009 PSMG3-AS1Q96PY0 264 aa8.25□□□□□ -1.09
IFT20-205ENST00000578009 IGF1RP08069 1367 aa8.24□□□□□ -1.09
IFT20-205ENST00000578009 PHF20L1A8MW92 1017 aa8.24□□□□□ -1.09
IFT20-205ENST00000578009 GTPBP3Q969Y2 492 aaKnown RBP8.24□□□□□ -1.09
IFT20-205ENST00000578009 GMCL1Q96IK5 515 aa8.24□□□□□ -1.09
IFT20-205ENST00000578009 GAS2L1Q99501 681 aaPredicted RBP8.24□□□□□ -1.09
IFT20-205ENST00000578009 RSF1Q96T23 1441 aaPredicted RBP8.23□□□□□ -1.09
IFT20-205ENST00000578009 MSTNO14793 375 aa8.23□□□□□ -1.09
IFT20-205ENST00000578009 GIGYF1O75420 1035 aaPredicted RBP8.23□□□□□ -1.09
IFT20-205ENST00000578009 POU4F2Q12837 409 aa8.23□□□□□ -1.09
IFT20-205ENST00000578009 PODNQ7Z5L7 613 aa8.23□□□□□ -1.09
IFT20-205ENST00000578009 BEND7Q8N7W2 519 aaPredicted RBP8.23□□□□□ -1.09
IFT20-205ENST00000578009 PCDHB9Q9Y5E1 797 aa8.23□□□□□ -1.09
IFT20-205ENST00000578009 A0A1W2PRU2 124 aa8.22□□□□□ -1.09
IFT20-205ENST00000578009 BCRP11274 1271 aa8.22□□□□□ -1.09
IFT20-205ENST00000578009 PLA2G4EQ3MJ16 856 aa8.22□□□□□ -1.09
IFT20-205ENST00000578009 SLC27A3Q5K4L6 730 aa8.22□□□□□ -1.09
IFT20-205ENST00000578009 DCAF5Q96JK2 942 aa8.22□□□□□ -1.09
IFT20-205ENST00000578009 H7C1W4 665 aa8.21□□□□□ -1.1
IFT20-205ENST00000578009 GPC1P35052 558 aa8.21□□□□□ -1.1
IFT20-205ENST00000578009 NLRP3Q96P20 1036 aa8.21□□□□□ -1.1
IFT20-205ENST00000578009 TRERF1Q96PN7 1200 aa8.21□□□□□ -1.1
IFT20-205ENST00000578009 DYRK1BQ9Y463 629 aa8.21□□□□□ -1.1
IFT20-205ENST00000578009 RFC5P40937 340 aa8.2□□□□□ -1.1
IFT20-205ENST00000578009 ACDQ96AP0 544 aa8.2□□□□□ -1.1
IFT20-205ENST00000578009 SPOCK3Q9BQ16 436 aa8.2□□□□□ -1.1
IFT20-205ENST00000578009 TRIM34Q9BYJ4 488 aa8.19□□□□□ -1.1
IFT20-205ENST00000578009 ZBBXA8MT70 800 aa8.18□□□□□ -1.1
IFT20-205ENST00000578009 MX2P20592 715 aa8.18□□□□□ -1.1
IFT20-205ENST00000578009 CC2D2BQ6DHV5 1058 aa8.18□□□□□ -1.1
IFT20-205ENST00000578009 NSFL1CQ9UNZ2 370 aaKnown RBP8.18□□□□□ -1.1
IFT20-205ENST00000578009 ERVK-9P63128 1117 aa8.17□□□□□ -1.1
IFT20-205ENST00000578009 NBPF10Q6P3W6 841 aaKnown RBP8.17□□□□□ -1.1
IFT20-205ENST00000578009 NBPF15Q8N660 670 aa8.17□□□□□ -1.1
IFT20-205ENST00000578009 GALNT6Q8NCL4 622 aa8.17□□□□□ -1.1
IFT20-205ENST00000578009 ADAM23O75077 832 aa8.16□□□□□ -1.1
IFT20-205ENST00000578009 FBXO45P0C2W1 286 aa8.16□□□□□ -1.1
IFT20-205ENST00000578009 ESF1Q9H501 851 aaKnown RBP8.16□□□□□ -1.1
IFT20-205ENST00000578009 TIMMDC1Q9NPL8 285 aa8.16□□□□□ -1.1
IFT20-205ENST00000578009 ITGB2P05107 769 aa8.15□□□□□ -1.1
IFT20-205ENST00000578009 RNF20Q5VTR2 975 aa8.15□□□□□ -1.1
IFT20-205ENST00000578009 CYP2U1Q7Z449 544 aa8.15□□□□□ -1.1
IFT20-205ENST00000578009 CCDC125Q86Z20 511 aa8.15□□□□□ -1.1
IFT20-205ENST00000578009 GRIP2Q9C0E4 1043 aa8.15□□□□□ -1.1
IFT20-205ENST00000578009 NUCKS1Q9H1E3 243 aaKnown RBP8.15□□□□□ -1.1
IFT20-205ENST00000578009 CECR2Q9BXF3 1484 aa8.14□□□□□ -1.11
IFT20-205ENST00000578009 SCTRP47872 440 aa8.14□□□□□ -1.11
IFT20-205ENST00000578009 CLN3Q13286 438 aa8.14□□□□□ -1.11
IFT20-205ENST00000578009 TAS1R3Q7RTX0 852 aa8.14□□□□□ -1.11
IFT20-205ENST00000578009 ARHGEF10LQ9HCE6 1279 aa8.14□□□□□ -1.11
IFT20-205ENST00000578009 BAZ1AQ9NRL2 1556 aaPredicted RBP8.14□□□□□ -1.11
IFT20-205ENST00000578009 WASLO00401 505 aaPredicted RBP8.13□□□□□ -1.11
IFT20-205ENST00000578009 OIP5O43482 229 aa8.13□□□□□ -1.11
IFT20-205ENST00000578009 F11P03951 625 aa8.13□□□□□ -1.11
IFT20-205ENST00000578009 TMEM259Q4ZIN3 620 aa8.13□□□□□ -1.11
IFT20-205ENST00000578009 OXCT2Q9BYC2 517 aaPredicted RBP8.13□□□□□ -1.11
IFT20-205ENST00000578009 LRRC4BQ9NT99 713 aa8.13□□□□□ -1.11
IFT20-205ENST00000578009 PCDHB11Q9Y5F2 797 aa8.13□□□□□ -1.11
IFT20-205ENST00000578009 SPATA31C2B4DYI2 1134 aa8.12□□□□□ -1.11
IFT20-205ENST00000578009 PROCP04070 461 aa8.12□□□□□ -1.11
IFT20-205ENST00000578009 GPAMQ9HCL2 828 aa8.12□□□□□ -1.11
IFT20-205ENST00000578009 RAB6BQ9NRW1 208 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms