RNA–Protein interactions for RNA: ENST00000577824.5

MKS1-206, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5

Gene MKS1, Length 1,158 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-206ENST00000577824 PNISRQ8TF01 805 aaKnown RBP16.96■□□□□ 0.31
MKS1-206ENST00000577824 RAPGEF4Q8WZA2 1011 aa16.96■□□□□ 0.31
MKS1-206ENST00000577824 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP16.96■□□□□ 0.31
MKS1-206ENST00000577824 BRWD3Q6RI45 1802 aa16.96■□□□□ 0.3
MKS1-206ENST00000577824 U2AF1L5P0DN76 240 aaPredicted RBP16.95■□□□□ 0.3
MKS1-206ENST00000577824 U2AF1Q01081 240 aaKnown RBP eCLIP16.95■□□□□ 0.3
MKS1-206ENST00000577824 BCL9O00512 1426 aa16.95■□□□□ 0.3
MKS1-206ENST00000577824 HMOX1P09601 288 aa16.94■□□□□ 0.3
MKS1-206ENST00000577824 TATP17735 454 aaPredicted RBP16.94■□□□□ 0.3
MKS1-206ENST00000577824 WDR43Q15061 677 aaKnown RBP eCLIP16.94■□□□□ 0.3
MKS1-206ENST00000577824 SEPT12Q8IYM1 358 aa16.94■□□□□ 0.3
MKS1-206ENST00000577824 ADAMTS7Q9UKP4 1686 aa16.94■□□□□ 0.3
MKS1-206ENST00000577824 PLEKHF1Q96S99 279 aa16.93■□□□□ 0.3
MKS1-206ENST00000577824 PRKAR2BP31323 418 aa16.92■□□□□ 0.3
MKS1-206ENST00000577824 PCDH11XQ9BZA7 1347 aa16.92■□□□□ 0.3
MKS1-206ENST00000577824 PCDH11YQ9BZA8 1340 aa16.92■□□□□ 0.3
MKS1-206ENST00000577824 DDB1Q16531 1140 aa16.91■□□□□ 0.3
MKS1-206ENST00000577824 AMOTQ4VCS5 1084 aa16.91■□□□□ 0.3
MKS1-206ENST00000577824 ADAMTS8Q9UP79 889 aa16.91■□□□□ 0.3
MKS1-206ENST00000577824 ZCRB1Q8TBF4 217 aaKnown RBP16.9■□□□□ 0.3
MKS1-206ENST00000577824 PNNQ9H307 717 aaKnown RBP16.9■□□□□ 0.3
MKS1-206ENST00000577824 EXOC5O00471 708 aa16.89■□□□□ 0.29
MKS1-206ENST00000577824 SPG7Q9UQ90 795 aa16.89■□□□□ 0.29
MKS1-206ENST00000577824 TOGARAM1Q9Y4F4 1720 aa16.88■□□□□ 0.29
MKS1-206ENST00000577824 CYP27B1O15528 508 aa16.87■□□□□ 0.29
MKS1-206ENST00000577824 PLEKHO1Q53GL0 409 aaPredicted RBP16.87■□□□□ 0.29
MKS1-206ENST00000577824 MRC1P22897 1456 aa16.86■□□□□ 0.29
MKS1-206ENST00000577824 NHSQ6T4R5 1651 aa16.86■□□□□ 0.29
MKS1-206ENST00000577824 A0A0G2JS52 829 aa16.86■□□□□ 0.29
MKS1-206ENST00000577824 PHKG2P15735 406 aa16.86■□□□□ 0.29
MKS1-206ENST00000577824 MYT1Q01538 1121 aa16.86■□□□□ 0.29
MKS1-206ENST00000577824 NKX1-1Q15270 411 aaPredicted RBP16.86■□□□□ 0.29
MKS1-206ENST00000577824 KRT27Q7Z3Y8 459 aa16.86■□□□□ 0.29
MKS1-206ENST00000577824 MARCH10Q8NA82 808 aaPredicted RBP16.86■□□□□ 0.29
MKS1-206ENST00000577824 GAS2L2Q8NHY3 880 aa16.86■□□□□ 0.29
MKS1-206ENST00000577824 PHACTR3Q96KR7 559 aa16.86■□□□□ 0.29
MKS1-206ENST00000577824 DOT1LQ8TEK3 1739 aa16.86■□□□□ 0.29
MKS1-206ENST00000577824 MTHFSDQ2M296 383 aaKnown RBP16.85■□□□□ 0.29
MKS1-206ENST00000577824 RUNDC1Q96C34 613 aa16.85■□□□□ 0.29
MKS1-206ENST00000577824 KDM6AO15550 1401 aaPredicted RBP16.85■□□□□ 0.29
MKS1-206ENST00000577824 SCN11AQ9UI33 1791 aa16.84■□□□□ 0.29
MKS1-206ENST00000577824 PDE3BQ13370 1112 aa16.84■□□□□ 0.29
MKS1-206ENST00000577824 AKAP4Q5JQC9 854 aa16.84■□□□□ 0.29
MKS1-206ENST00000577824 IFNL2Q8IZJ0 200 aa16.84■□□□□ 0.29
MKS1-206ENST00000577824 MAPK8IP3Q9UPT6 1336 aa16.84■□□□□ 0.29
MKS1-206ENST00000577824 MAP3K5Q99683 1374 aa16.84■□□□□ 0.29
MKS1-206ENST00000577824 DLG5Q8TDM6 1919 aa16.84■□□□□ 0.29
MKS1-206ENST00000577824 ZNF530Q6P9A1 599 aaPredicted RBP16.83■□□□□ 0.28
MKS1-206ENST00000577824 SBF2Q86WG5 1849 aa16.83■□□□□ 0.28
MKS1-206ENST00000577824 CEMIPQ8WUJ3 1361 aa16.82■□□□□ 0.28
MKS1-206ENST00000577824 NEFMP07197 916 aa16.82■□□□□ 0.28
MKS1-206ENST00000577824 NCBP3Q53F19 620 aaKnown RBP16.82■□□□□ 0.28
MKS1-206ENST00000577824 VIRMAQ69YN4 1812 aaKnown RBP16.82■□□□□ 0.28
MKS1-206ENST00000577824 HSP90AB1P08238 724 aaKnown RBP16.81■□□□□ 0.28
MKS1-206ENST00000577824 NFE2L2Q16236 605 aa16.81■□□□□ 0.28
MKS1-206ENST00000577824 TNS1Q9HBL0 1735 aaKnown RBP16.81■□□□□ 0.28
MKS1-206ENST00000577824 SIPA1L3O60292 1781 aaPredicted RBP16.8■□□□□ 0.28
MKS1-206ENST00000577824 HTATSF1O43719 755 aaKnown RBP16.8■□□□□ 0.28
MKS1-206ENST00000577824 C1orf141Q5JVX7 400 aa16.8■□□□□ 0.28
MKS1-206ENST00000577824 CCDC146Q8IYE0 955 aa16.8■□□□□ 0.28
MKS1-206ENST00000577824 FAM9BQ8IZU0 186 aa16.8■□□□□ 0.28
MKS1-206ENST00000577824 DDX54Q8TDD1 881 aaKnown RBP16.8■□□□□ 0.28
MKS1-206ENST00000577824 DCAF5Q96JK2 942 aa16.8■□□□□ 0.28
MKS1-206ENST00000577824 GNAT3A8MTJ3 354 aa16.79■□□□□ 0.28
MKS1-206ENST00000577824 TMPOP42166 694 aaKnown RBP16.79■□□□□ 0.28
MKS1-206ENST00000577824 FAM196AQ6ZSG2 479 aa16.79■□□□□ 0.28
MKS1-206ENST00000577824 PAPPAQ13219 1627 aa16.78■□□□□ 0.28
MKS1-206ENST00000577824 ITGB4P16144 1822 aa16.77■□□□□ 0.28
MKS1-206ENST00000577824 RGPD3A6NKT7 1758 aaPredicted RBP16.77■□□□□ 0.28
MKS1-206ENST00000577824 RGPD4Q7Z3J3 1758 aa16.77■□□□□ 0.28
MKS1-206ENST00000577824 NGEFQ8N5V2 710 aa16.76■□□□□ 0.27
MKS1-206ENST00000577824 ERVV-2B6SEH9 535 aa16.75■□□□□ 0.27
MKS1-206ENST00000577824 APAF1O14727 1248 aa16.75■□□□□ 0.27
MKS1-206ENST00000577824 RNMTO43148 476 aaKnown RBP16.75■□□□□ 0.27
MKS1-206ENST00000577824 LMOD3Q0VAK6 560 aa16.75■□□□□ 0.27
MKS1-206ENST00000577824 CCDC27Q2M243 656 aa16.75■□□□□ 0.27
MKS1-206ENST00000577824 FAM182BQ5T319 152 aa16.75■□□□□ 0.27
MKS1-206ENST00000577824 ILDR2Q71H61 639 aa16.75■□□□□ 0.27
MKS1-206ENST00000577824 BTAF1O14981 1849 aa16.75■□□□□ 0.27
MKS1-206ENST00000577824 TRIM35Q9UPQ4 493 aa16.74■□□□□ 0.27
MKS1-206ENST00000577824 RIPK4P57078 832 aa16.73■□□□□ 0.27
MKS1-206ENST00000577824 MPRIPQ6WCQ1 1025 aa16.73■□□□□ 0.27
MKS1-206ENST00000577824 IL17REQ8NFR9 667 aa16.73■□□□□ 0.27
MKS1-206ENST00000577824 CICQ96RK0 1608 aaPredicted RBP16.73■□□□□ 0.27
MKS1-206ENST00000577824 UBR2Q8IWV8 1755 aa16.72■□□□□ 0.27
MKS1-206ENST00000577824 BCL11BQ9C0K0 894 aaPredicted RBP16.72■□□□□ 0.27
MKS1-206ENST00000577824 SLC52A2Q9HAB3 445 aa16.72■□□□□ 0.27
MKS1-206ENST00000577824 LGR6Q9HBX8 967 aa16.72■□□□□ 0.27
MKS1-206ENST00000577824 KDM3BQ7LBC6 1761 aa16.72■□□□□ 0.27
MKS1-206ENST00000577824 RTF1Q92541 710 aaKnown RBP16.71■□□□□ 0.27
MKS1-206ENST00000577824 RRP7AQ9Y3A4 280 aaKnown RBP16.71■□□□□ 0.27
MKS1-206ENST00000577824 ZNF831Q5JPB2 1677 aa16.71■□□□□ 0.27
MKS1-206ENST00000577824 ZNF521Q96K83 1311 aa16.7■□□□□ 0.26
MKS1-206ENST00000577824 LY75O60449 1722 aa16.7■□□□□ 0.26
MKS1-206ENST00000577824 KCNQ2O43526 872 aa16.69■□□□□ 0.26
MKS1-206ENST00000577824 PRIM1P49642 420 aaKnown RBP16.69■□□□□ 0.26
MKS1-206ENST00000577824 MCM10Q7L590 875 aa16.69■□□□□ 0.26
MKS1-206ENST00000577824 ACSBG1Q96GR2 724 aa16.69■□□□□ 0.26
MKS1-206ENST00000577824 ADRA2BP18089 450 aa16.68■□□□□ 0.26
MKS1-206ENST00000577824 DCTN1Q14203 1278 aa16.68■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms